G89553


Basic Information

Item Value
gene id G89553
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 37564974 ~ 37565215 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111721
tccaatcttgtaatcagtcattcagcctatttaaatggaggaaagtagtcactgtgtcgtttggtatcattgtgtgcaccacactgaacatggaccagagaaagcaaaggagagagttgtctgaggagatcagaaagaaaataatagacaagcatgttAAAGGCAAAGGCTACaggaccatctccaagcagcttgatgttcctgtgacaacagttgcaaatattattaagaagttcaaggtc

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU111721 True 242 lncRNA 0.40 1 37564974 37565215

Neighbor

gene id symbol gene type direction distance location
AMCG00021906 sall3,LOC103388658,LOC102796582,LOC103369140 coding downstream 330133 37212616 ~ 37234841 (-)
AMCG00021905 NA coding downstream 393595 37091198 ~ 37171379 (-)
AMCG00021904 NA coding downstream 565334 36992851 ~ 36999640 (-)
AMCG00021903 atp9b coding downstream 589858 36944033 ~ 36975116 (-)
AMCG00021901 NA coding downstream 690764 36867843 ~ 36874210 (-)
AMCG00021907 galr1,LOC107373077,LOC102797365 coding upstream 392540 37957755 ~ 37958533 (-)
AMCG00021909 NA coding upstream 614865 38180080 ~ 38224604 (-)
AMCG00021908 NA coding upstream 672923 38238138 ~ 38245037 (-)
AMCG00021913 tshz1,LOC107592027,LOC107748691,LOC107696938,LOC107593600 coding upstream 1254196 38819411 ~ 38826295 (-)
AMCG00021921 NA coding upstream 1373392 38938607 ~ 38945501 (-)
G89549 NA non-coding downstream 97383 37466781 ~ 37467591 (-)
G89539 NA non-coding downstream 306156 37258543 ~ 37258818 (-)
G89431 NA non-coding downstream 1053043 36511599 ~ 36511931 (-)
G89428 NA non-coding downstream 1063146 36498194 ~ 36501828 (-)
G89373 NA non-coding downstream 1579713 35967119 ~ 35985261 (-)
G89559 NA non-coding upstream 49182 37614397 ~ 37614596 (-)
G89562 NA non-coding upstream 195602 37760817 ~ 37761021 (-)
G89565 NA non-coding upstream 253347 37818562 ~ 37818769 (-)
G89566 NA non-coding upstream 327579 37892794 ~ 37893012 (-)
G89567 NA non-coding upstream 377132 37942347 ~ 37942680 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other downstream 877332 36677106 ~ 36687642 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other downstream 1027256 36524509 ~ 36537718 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other downstream 1126624 36414879 ~ 36438350 (-)
G89368 NA other downstream 1617990 35943752 ~ 35946984 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other downstream 2169203 35375016 ~ 35395771 (-)
G89598 NA other upstream 696172 38261387 ~ 38283855 (-)
G89611 NA other upstream 830356 38395571 ~ 38397755 (-)
AMCG00021918 cndp2,LOC103371436,LOC104951856,LOC105892098,LOC106958632,LOC106588296,LOC102776275 other upstream 1690664 39255879 ~ 39276056 (-)
G89765 NA other upstream 1920618 39485833 ~ 39486288 (-)
AMCG00021924 eppk1,LOC106938278,LOC107592034 other upstream 1921682 39486897 ~ 39548802 (-)

Expression


Co-expression Network