G89723


Basic Information

Item Value
gene id G89723
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 39383649 ~ 39385676 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111908
tttttttttttaatttaaacctttGCAGAGAATCCCGCTCTCCAGATGAAAGACATTGTGAACGCAAAAGAAGGAAATAGATTGTTTCTGAAGGTGTTAAACTATTTGCACATGGTTACAACAGAAAATATGGTGAAAAAACTTTTTACCGTGAAAAACTGATTTACCTAAAAACTACAGGCTTTGTCATTGGTCAAAGAGAATTAATCCCAAAATTGTaccatttcaaatcaaaagaggTATGATTGAATCTCTGCAAATTTTAGTTATTAATCCACTTCATATGTGTTATGTATTAGGAGTTATTTCTTGAGCATTACCCTCATTTGAACAATGAATTGACATCAACCTGATTTGCTATATTTCAGTTattaaattgcagtttttttaacatgcaatgtTCTCTGTGAATTGCAGTattaaaacatcttcaaaaaaGCCAAGCTAATTTTTTGTAAGTTTCCACATCCATTATTTCATATTCTGAAATGTGTGAGGGGAAAATACCAGGATTTGAGGCATTTAATGTAAAGTACCCATACATGTACCAACATGAGAGATGCATGTCACAAAGCTGGGAGAGCAACATGGTAGACCAAGGGGATTATCAATGAAAACCCATCACTGCCTGTTCAATTCAACACAATGCCGAACTGGAAAAGCAAATCAAGAACCGAAGAAATTTGTTCTTGATCCACTAGAAGTTGCAGGAGGTATTCTGCAGTATTTCTCTAGCCATCAATTCAGATGCTTTCAACAAAGTGCTGACTATAATAAAGTGTATTATAATAagttatgttttggttttgtattgctgtttgtGTGATTTAAGCCCTGTGTTTAAGATCGAAAGCTAATTGTGTTACATTATACAACAGCCAATCTCAAGAATCCACaagtttctaaaaataaaatgttgttgtgGAATCTGTCAAGTGCTTATGGAAGAGAAACGAAAATGTCTTGTCTAACAGATTTAACTTCAGGGAGAGCAAGACTTTTCTGTTCGCATTGTTTATTTAGCATTGTTTACCTAAATAAGTTTATAAATACTGCTGGAGCGTTCAGTCTTTACAGTTGATTTACCTTCATATCTACTTATGTAATTTTCAAAAACTGGTACACAAGAAGAAAACGCAAATTCTACACTACTACTTATGCATGTTAACAAACTTCCCATATGAATGCCATTACACCAAAGTCTGACATTTCACAAGTGGTGCCAATGTGAATGGAGCACTGTCCCATAAAATCATTTGATAGTGTCCTGTCCCTATACTTTGTGTTCATGTCTAACATGCTGATCCATTCACCTACTGATCATGTGCAATTGAGTTATAAGAATGCAGTTTTGTGACATAAGATCTCTACATCactttatcatttttataaatCAGTCTAGCTCTAATTTCCTCGATGTGCTCCAGGACGAAAGGCACATAAATCTTCTGTATATATCAGAAGGGTTACAGTAATTATTAGAATGATAGATTGGTCTACACACCATACCTCACACCACACCTGTCTTCTGGTCGTCTTCTACTATTGTTCAGATACTGTCCAACAATCCTTAGACATGTTGGGAGATGACCATACAAAATGCAAGTATTAATAGTGGGGCAATCTATGTGTTCATTTAGATTTCaagttaattttctttttcctattgatattatttattattatttataagtaCTACTTCAAACCATTTTTCTTATTTAGGAAGTTAAGAGTGTACAGTAAAACTCAATGTGTAGGTATGCACTCCTtctcaattacatatttttaatgtctcAGTTTCCAGGGCATAAAAGAATGTGTTTGAGGGtaatgccttttctttctttcttttaggaATACAAGGAGTTAAAGATCATTGAAAGTTCTAATTTTGTAATTACCAATTAGCTGGTGTTATTTACCTTCTGGGTTGTAAGCTGCAGTGTGGTGGGCTGTCATgttgcctgtttttttgttatcattttttttatgttgcctGTTTTATGTTATGTGACAAAGTAGTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111908 True 2028 lncRNA 0.34 1 39383649 39385676

Neighbor

gene id symbol gene type direction distance location
AMCG00021922 NA coding downstream 10192 39371806 ~ 39373457 (-)
AMCG00021916 NA coding downstream 97847 39283270 ~ 39285802 (-)
AMCG00021917 NA coding downstream 149213 39209015 ~ 39234436 (-)
AMCG00021919 NA coding downstream 190967 39190898 ~ 39192682 (-)
AMCG00021920 znf407,LOC106583495,LOC106605077 coding downstream 330976 39044785 ~ 39052673 (-)
AMCG00021926 NA coding upstream 34581 39420257 ~ 39423376 (-)
AMCG00021923 NA coding upstream 58812 39444488 ~ 39448728 (-)
AMCG00021925 NA coding upstream 90300 39475976 ~ 39479016 (-)
AMCG00021928 NA coding upstream 169831 39555507 ~ 39556745 (-)
G89716 NA non-coding downstream 49524 39333925 ~ 39334125 (-)
G89657 NA non-coding downstream 443825 38939562 ~ 38939824 (-)
G89631 NA non-coding downstream 566499 38816944 ~ 38817150 (-)
G89630 NA non-coding downstream 739611 38643828 ~ 38644038 (-)
G89625 NA non-coding downstream 892064 38491335 ~ 38491585 (-)
G89724 NA non-coding upstream 142 39385818 ~ 39386082 (-)
G89748 NA non-coding upstream 76799 39462475 ~ 39462921 (-)
G89749 NA non-coding upstream 78756 39464432 ~ 39465633 (-)
G89751 NA non-coding upstream 83089 39468765 ~ 39470104 (-)
G89776 NA non-coding upstream 160265 39545941 ~ 39546146 (-)
AMCG00021918 cndp2,LOC103371436,LOC104951856,LOC105892098,LOC106958632,LOC106588296,LOC102776275 other downstream 107593 39255879 ~ 39276056 (-)
G89611 NA other downstream 985894 38395571 ~ 38397755 (-)
G89598 NA other downstream 1099794 38261387 ~ 38283855 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other downstream 2696007 36677106 ~ 36687642 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other downstream 2845931 36524509 ~ 36537718 (-)
G89765 NA other upstream 100157 39485833 ~ 39486288 (-)
AMCG00021924 eppk1,LOC106938278,LOC107592034 other upstream 101221 39486897 ~ 39548802 (-)

Expression


Co-expression Network