XLOC_006267 (CU651669.1)


Basic Information

Item Value
gene id XLOC_006267
gene name CU651669.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 48765887 ~ 48841757 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012269
tataatataatatataaatatattcccCCAGTTTTCCAGTTGGGGCCACTATTACTCCAGTTTCATACTATAGCTGTTTTTAAACTGATGTCCAAGGAATATTTCAGCCTTAAATCTCCACACACCATAGTATTTCATTTAATTGACctgttgtaaaaatatatagttacCCAAAATACCTGCTTTGAGGAGTCTGTTTACCGCTGTTTATATACATTCTTGCCCTCCCCGTGAACAAGTGCGTGGGCGGGGTTTGGCAACAGCTCGACTAATCATCTTCCACAAGGGGCGGAGCTACAGGCCGGCTTCATGTGAGCCGAACAAACGGCAGTATTTGGATTGAGTGAGTGGAGGGTGAAGGTACCAGCTCTCCTGTGAACTGTCTTCTGTGGAATATGATCATACCCCTGGCTTTGTATTTTAAAGGGATGCAACTGATGCTCTTCCACACAATATGGGACTTTCTTTTACTCTAAATGCCGAAGAGACTGCAAATCAAACTATATAAAATGATCATGTTTGTATCGAACAAGTGCAATGGTAAACTCAATAGCTTCTTTGAGATTTCATGCAAATACCTTGGTATATGAACATGAAATCAttcattgtatttattcattgtcaaaataataaatcattgtaCTTTTTGTAATAAAGGAAACGGCATGTACTGCTTCA
>TCONS_00013427
TTTGGATTGAGTGAGTGGAGGGTGAAGGTACCAGCTCTCCTGTGAACTGTCTTCTGTGGAATATGATCATACCCCTGGCTTTGTATTTTAAAGGGATGCAACTGATGCTCTTCCACACAATATGGGACTTTCTTTTACTCTAAATGCCGAAGtctCTTTGGCTCCAGTAAGGGCTGATGGGAGTGTTTACTGTTGACAGCTGACATCAGATGGTGGGACGGGGAGATCGAGAGCGAAAGCGTGAATGAATG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101069

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012269 False 678 lncRNA 0.38 2 48765887 48767474
TCONS_00013427 True 251 lncRNA 0.47 2 48766220 48841757

Neighbor

gene id symbol gene type direction distance location
XLOC_006266 NA coding upstream 32854 48729645 ~ 48733033 (+)
XLOC_006265 si:ch1073-268j14.1 coding upstream 113302 48617974 ~ 48652585 (+)
XLOC_006264 NA coding upstream 148363 48615112 ~ 48617524 (+)
XLOC_006263 NA coding upstream 178477 48568987 ~ 48587410 (+)
XLOC_006262 NA coding upstream 209127 48552706 ~ 48556760 (+)
XLOC_006268 NA coding downstream 60410 48902167 ~ 48963841 (+)
XLOC_006269 CABZ01030259.1 coding downstream 61188 48902945 ~ 48903059 (+)
XLOC_006270 CABZ01005325.1 coding downstream 140929 48982686 ~ 48982800 (+)
XLOC_006271 egln1a coding downstream 333867 49175624 ~ 49206713 (+)
XLOC_006272 NA coding downstream 442016 49283773 ~ 49287310 (+)
XLOC_006259 NA non-coding upstream 701578 48063125 ~ 48064309 (+)
XLOC_006273 NA non-coding downstream 466793 49308550 ~ 49313340 (+)

Expression


Co-expression Network