XLOC_006276


Basic Information

Item Value
gene id XLOC_006276
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 49865172 ~ 49867408 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013695
tttactaattttaatgTTTATCCTAGAAATTGGAAATTGCAGGATACAAAAgcagacattttttattttatttttttattgcatctgGTGAGTTTGATGAGTTTATCAGCATTTTTTGGTTTACAGTAAatctcacaattcagacttttttcTCAGAACTGAGAGGGGAAAAATTATATAGATATATCATTATTATCACAGAAATTGGAAAATTGCAGGACACAAacgatttatttttttgcatctggTGAGTTTCTCAGCATTGTTTCcctttatatctcacaattcagactttatttctcagaatcgtgaggagaaaaatataataaaattataaaatgataCATATTTACTTTGCACAGTAACCTTTTTCATTTTTATCCCTGAAATTAGAGAATTGCAAGATACAAACGCCGACATTTATTTTCAGCATTTCTTccatttatatctcacaattcagactttatttctcagaatcgtgaggggaaaaataaaataatctttacatttacaatttataatttttatccTAGAAATTGGAAAATTGCAAGATACaaacacagatttttattttatttttttttgcatgtggtGAGTTTGTCAgcatttatatctcacaattcagactttttcCCTCAATATCgtgaggggaaaaaataaaatgatatatagtatatatttactcattttattttcaaCCTAGAAATTGGAGAATTACAAGATACAAatacagacatttatttatttttgtttgtacctGGTAAGTATCAGCCTTTTCTGGTTTATACCTCACAATTCTTTTTTCTCAGAGCCATGAGGGGAAAAAttctataattataatatttttatcccAGAAATGAGAGAATTGCAAGATCCAAACAGCCTTTTCTTAGTGCATCTGGTGATTTCGTCAGCATTTCTCACAGTTCAGACGTTTGTctcagagaaaaaaataaatcgaTTCCCAAttacctttttttatttgtatcccGATGCAGAAACGTGCTCCTAGAGGTAGATCTGACAAAACGTTGAATCATATCTAGATCTCTGATGTTTCAGATAAAGTTTAACACAACATACAATacacaaaactaaacaatacAGAAGATAAACACAATTATATTAATGATTAAGAACTTGACGTATTTTTCACTGGCGACTGGGACATTTGCGTCAGATGGAGctggaataaaaacaataaatattaccaTGACTTGAACCTCGTGTGACCTTTGACATTCACTGCACATCATCTCCAGGTCCTCCAGATCCTCTCAAGTGCATTTCATAAACGAAGACCAAGGAAACGTGGCTTTCATCCTTGTGGGAGAATAAATATATCAGCGTTCTGAAGGCATTACGTGCAGACATTCGTTACGTCACTCATGCACGAGTCTGGATTCAAAATACAGACGGTAGTGTGTTCAGATGATTTCAGTCTTCAACAGCAGGACTCATATTCTCAGGAGGGACGATAAGAGAAAGATCTGGGCCGACCAGATTGTAGCagctttcaaaaataataatcacacaTGGGGAAATGAGAAAAACACCAAGACAGAAACCAAGAATATCACAGGCCTGCGTTCGCTCGCTCCACATCCGTCCTGCAGGATACAGTAGCTTATAGCACAGCGTTAATGTTGTGCGTTCCCATGCCAACAGGGGGCGGAGACTGTGATGGTCATGGGCGGGGCTTGTGCATGCTGGCTCCTTCTCTCCTTCGGTGAATCAGCCTGCGGCGTAACTGCTGAGGAAAGAGTAAAACATGGGCAGCTTCATGCGCTGCTGGTCTCGCCGACACCACGCGATCACCGTGCCCTCACTGTTAGCCGTGTATAGATGATGACCGTCACATGAGAACGTCAGACT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013695 True 1875 lncRNA 0.37 2 49865172 49867408

Neighbor

gene id symbol gene type direction distance location
XLOC_006275 NA coding upstream 39274 49825560 ~ 49825898 (+)
XLOC_006274 ggps1 coding upstream 95800 49727333 ~ 49769372 (+)
XLOC_006273 NA coding upstream 551832 49308550 ~ 49313340 (+)
XLOC_006272 NA coding upstream 577862 49283773 ~ 49287310 (+)
XLOC_006271 egln1a coding upstream 658459 49175624 ~ 49206713 (+)
XLOC_006277 gpr137ba coding downstream 283999 50151407 ~ 50171965 (+)
XLOC_006278 dnajc12 coding downstream 501260 50368668 ~ 50373021 (+)
XLOC_006279 cox5b2 coding downstream 508392 50375800 ~ 50378038 (+)
XLOC_006280 NA coding downstream 516506 50383914 ~ 50390410 (+)
XLOC_006281 NA coding downstream 584496 50451904 ~ 50454700 (+)
XLOC_006270 CABZ01005325.1 non-coding upstream 882372 48982686 ~ 48982800 (+)
XLOC_006268 NA non-coding upstream 901331 48902167 ~ 48963841 (+)
XLOC_006282 NA non-coding downstream 603452 50470860 ~ 50471274 (+)
XLOC_006283 CU570781.3 non-coding downstream 614409 50481817 ~ 50517225 (+)
XLOC_006284 NA non-coding downstream 620749 50488157 ~ 50490156 (+)

Expression


Co-expression Network