XLOC_006282



Basic Information


Item Value
gene id XLOC_006282
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 50470860 ~ 50471274 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00013433
GTTGTGAGACTTCGAGAAAAATatttagcacttataaagtatgtcGAAATCAACAAAGCAGCTGATAATGACTGGTTTCGAGTCCAACAAAGAGGGCACAAGGTGGTTTGGAAAATGCTGGTATATTCACGAGCTTCTCAAATATGATTTTGGCATGGAATTTGATATTCCAGTTACATATCCTCCTGCCACAGCTCCTGAAGTGGCCATTCCTGAGTTAGATAGGAAGACAGCGAAGATGTACAGAGGTGGAAAAATCTGCCGTACAGACCACTTCAAACCACTGTGGGCAAGAAATGTGCCAACGTTTGGTCTGGCTCATCTTATGGCTTTGGGACTTGGACCGTGGCTTGCGGTTGAGATTCCAGACCTCATTGCAAAAGGCTTAATTCAACATAAAGACCAAAACAGCTGA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00013433 True 415 lncRNA 0.43 1 50470860 50471274

Neighbor


gene id symbol gene type direction distance location
XLOC_006281 NA coding upstream 16160 50451904 ~ 50454700 (+)
XLOC_006280 NA coding upstream 80450 50383914 ~ 50390410 (+)
XLOC_006279 cox5b2 coding upstream 92822 50375800 ~ 50378038 (+)
XLOC_006278 dnajc12 coding upstream 97839 50368668 ~ 50373021 (+)
XLOC_006277 gpr137ba coding upstream 298895 50151407 ~ 50171965 (+)
XLOC_006283 CU570781.3 coding downstream 10543 50481817 ~ 50517225 (+)
XLOC_006284 NA coding downstream 16883 50488157 ~ 50490156 (+)
XLOC_006285 NA coding downstream 49351 50520625 ~ 50521600 (+)
XLOC_006286 dre-mir-202 coding downstream 131365 50602639 ~ 50602714 (+)
XLOC_006287 dntt coding downstream 306913 50778187 ~ 51021871 (+)
XLOC_006276 NA non-coding upstream 603452 49865172 ~ 49867408 (+)
XLOC_006275 NA non-coding upstream 644962 49825560 ~ 49825898 (+)
XLOC_006273 NA non-coding upstream 1157520 49308550 ~ 49313340 (+)
XLOC_006288 CABZ01077016.1 non-coding downstream 322482 50793756 ~ 50793872 (+)

Expression



Co-expression Network