G68058


Basic Information

Item Value
gene id G68058
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5766339 ~ 5768260 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU100662
ACGGTTTCTTAGCTGGGTGAAGACGATACCCCTAAAACGACAGCGAccttaaataacaaaaaaaaaacctcatcaAACGTTACCTAAGTGACCTTTTGCGCGTTATGGCACGTGATAAATCCCTAATTCTCGATGCTCCCACGATATAGTCAGTCCAGAATGGAAACGGACAGAAGTCACCGTCGTGGTTTTGGCACATTGGCTTCTGGAACCCAGCGTGGCGTCAGCTGATAGAAACAAAGTCTAAAACATAGAAACCCGTACTATAAAAACCATGGCACTGAAATGGATCCGCCTCCTTTCAAAGGCAACAAGTGACGGCTTTACACTTGCttatcatttacaaaaagaGGTTCTGTAAAAGCccagttaaaaaaatgcaggaaatgttttttttttttcgttggtTACACCAGAGGACAAAAACGCGAGCTTTAAAAAGcacctgtgtgtttgtggggaATGGCGTGAGTTTAAAGGGAATTCCACGGTCTTCATCTCTGAGCCTTTGTTTTCTCAAGATAATGCTGTGAAGCACGTCCGAGGCCGTTTTATGAAACGTAATGCAGTTCTTTTGTGAATATCTCGATAAGGATTTTCGTCAGCACCTTTTATCTCGGCGGTGACCTCTGTACTTGACCTTTTGGCATTCACCGCTTCACTCATTAAATCTCAGCGCCTTACATGCAAGAAAATCGGTGAGAATACAGataagggagaaaaaaaacgtcCGTGGCTGatcattaaaactattaaaaggcTCAGAAGCGAAACGGCGACATTCCCTTTTAATGTCGTACTATGAAAcaatgctattaaaaaaaagtcggTCACAAAAAAAGTGACGTTGtcataaaagcacacacacacacacacacggagatgGTTGCTCCCTATATGCCTGCGTGGGTCTGTTGGTTCGTGTTTTTGTCTGTCCGGTTCAGATGCCGGGTTCTCCGGGGTTCAGTCCGGTTCTGTCCGGTTCAGATAACGGGTTCTGCTGGCAGAGACCGTGGCACTTCTGATCACCGCCAT
>TU100664
ACGGTTTCTTAGCTGGGTGAAGACGATACCCCTAAAACGACAGCGAccttaaataacaaaaaaaaaacctcatcaAACGTTACCTAAGTGACCTTTTGCGCGTTATGGCACGTGATAAATCCCTAATTCTCGATGCTCCCACGATATAGTCAGTCCAGAATGGAAACGGACAGAAGTCACCGTCGTGGTTTTGGCACATTGGCTTCTGGAACCCAGCGTGGCGTCAGCTGATAGAAACAAAGTCTAAAACATAGAAACCCGTACTATAAAAACCATGGCACTGAAATGGATCCGCCTCCTTTCAAAGGCAACAAGTGACGGCTTTACACTTGCttatcatttacaaaaagaGGTTCTGTAAAAGCccagttaaaaaaatgcaggaaatgttttttttttttcgttggtTACACCAGAGGACAAAAACGCGAGCTTTAAAAAGcacctgtgtgtttgtggggaATGGCGTGAGTTTAAAGGGAATTCCACGGTCTTCATCTCTGAGCCTTTGTTTTCTCAAGATAATGCTGTGAAGCACGTCCGAGGCCGTTTTATGAAACGTAATGCAGTTCTTTTGTGAATATCTCGATAAGGATTTTCGTCAGCACCTTTTATCTCGGCGGTGACCTCTGTACTTGACCTTTTGGCATTCACCGCTTCACTCATTAAATCTCAGCGCCTTACATGCAAGAAAATCGGTGAGAATACAGataagggagaaaaaaaacgtcCGTGGCTGatcattaaaactattaaaaggcTCAGAAGCGAAACGGCGACATTCCCTTTTAATGTCGTACTATGAAAcaatgctattaaaaaaaagtcggTCACAAAAAAAGTGACGTTGtcataaaagcacacacacacacacacacggagatgGTTGCTCCCTATATGCCTGCGTGGGTCTGTTGGTTCGTGTTTTTGTCTGTCCGGTTCAGATGCCGGGTTCTCCGGGGTTCAGTCCGGTTCTGTCCGGTTCAGATAACGGGTTCTGCTGGCAGAGACCGTGGCACTTCTGATCACCGCCATCCATCTGCACACACATCGAAGTCTGACTGTACAGCAGAGCTTTACACGTTAAGGGTCACGTTTACCTTGCAAAACACACCTGGTAAAATTAATAATCGtgatttttggtttaaaataaaataaaattaaataaaattaaattactataaattatttggggttttattaataaaaaataattaataaaaaaacattgaatattttaatttaaatatatctaaataaatgaaattgcaATTCACAATCTCAGAGATTTaaatactgcacctttaaagtCTTTGCAAGGTTGCCTGTATTTATagtaagcaaaataatttaaacattaaatacaacaaaatgtttttagtttcatCCCACGTGAAAATTCCGTTTTCACATTATAGCTGATTTAGCTTTTGTTTATGacgaaattacatttaaaaagggCAGAAAATGATTATATTGACCtacataatgtaacattttggcTTGCTTCTACAGAATACACACTGATGGAACActctttataataaatgatcgtatacattattaataaataaatccttgtattattgtctttcattggacaaaaatatatttaagtaaaattataaatttaaatatatatatatatttttatattttttcagtgtagttcGCGAGGTTTACCATATAAGTTTTGCAGTACCTGTCGAAAAAGTATTCACTCTCCGTTCTGAAGTAGTAGATATGAGATTTGAAGTGCAGTTTGAAGACGTGCTCTTTGTGGATGTTTTCAGATTCTCCTGCATGAGTCACTGAGTAACCCAACAGAGGCAGACTGGCCAGAGGATACTTGTCCTGACCGAGAAGAGACAGacgtttcacacacacattcacagaggacgtgacagtgtgtgtgtgtgtgt

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU100662 False 1035 lncRNA 0.44 1 5766339 5767373
TU100664 True 1922 lncRNA 0.38 1 5766339 5768260

Neighbor

gene id symbol gene type direction distance location
LOC122351927 epha3,LOC107738584,LOC107676997 coding upstream 34269 5629122 ~ 5732070 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding upstream 238744 5523560 ~ 5527595 (+)
si:dkey-11f4.14 NA coding upstream 375153 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 380070 5377251 ~ 5386269 (+)
cd58 NA coding upstream 389553 5369603 ~ 5376786 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 48585 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 215629 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 234515 6002775 ~ 6004352 (+)
LOC122351516 LOC107720938,LOC107752607,LOC107689504,LOC107549895,LOC107549742 coding downstream 237092 6005352 ~ 6030322 (+)
LOC122351469 col4a1,LOC107557928,LOC107715912,LOC107688716,LOC107702910,LOC107721605 coding downstream 408813 6177073 ~ 6193230 (+)
G68056 NA non-coding upstream 1465 5746855 ~ 5764874 (+)
G68013 NA non-coding upstream 204169 5467541 ~ 5562170 (+)
G67979 NA non-coding upstream 373960 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 425050 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 452779 5307018 ~ 5313560 (+)
G68069 NA non-coding downstream 27834 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 65880 5834140 ~ 5914281 (+)
G68101 LOC107670329,LOC107549899,LOC107730347,LOC107730410 non-coding downstream 122088 5890348 ~ 5892207 (+)
G68160 NA non-coding downstream 320220 6088480 ~ 6103697 (+)
G68167 NA non-coding downstream 373359 6141619 ~ 6165064 (+)
trnam-cau_112 NA other upstream 308810 5457458 ~ 5457529 (+)
trnar-ccu_65 NA other upstream 309076 5457191 ~ 5457263 (+)
trnam-cau_111 NA other upstream 309496 5456772 ~ 5456843 (+)
trnar-ccu_64 NA other upstream 309764 5456503 ~ 5456575 (+)
trnar-ccu_63 NA other upstream 310897 5455370 ~ 5455442 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other downstream 115667 5883927 ~ 5885753 (+)
LOC122351907 LOC107670338,LOC107721263 other downstream 194624 5962884 ~ 5973123 (+)
si:ch211-167j6.3 NA other downstream 2573035 8341295 ~ 8342751 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other downstream 2662851 8431111 ~ 8433483 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other downstream 2692484 8460744 ~ 8506143 (+)

Expression


Co-expression Network