CI01000000_02127038_02149249


Basic Information

Item Value
gene id CI01000000_02127038_02149249
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 2126408 ~ 2152020 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_02127038_02149249.mRNA
AATCAAAGTCTAATTAGTAACTCAATTTATAGAGCGATAATCACAACAACTATTGCCAAGCAGACCGCTGGGAGCAATACAGCATGTTTTCTTCCAGTTTCATTGCAGTTCCTTGTACCATCCAATTTCATATACGCCGCCTGATAAATTTATCACTTGCGGTTTGACATAAATAGTTCACAGAGTACTCCAGTTTTTACACTAGTAAAGATGACCTTAGACAGTGTTCAATGAAGTCATATTAACACCTATCCAGACAACATAACAGCACAACAGACACTATAGCACATATATATTTAAGGAGCGGAGCAGGTTATGAATATTTCGCAGTGTTAAGTTTCCTATTAAGCGTTGACATTTCACTCCTCACTGTAGGTGGTACTGGGGGAAAATGACAGGTTGAGGAAAGGAATTTCCATGCAAACTCTATGTTTTTTTTTTTTTTCCTTTTCTCACATCCGGTGTGTGCATGTGTTAGAGAGATGGGGGGGGGAGCACATAGATCTTAATATATTTTAGTTTTAGCTTTGTTCTCATGCAGACACTAATAAATGCATTCAAAATTAAAAACACTTAAAAAGCACTATATATCATAGAAATAATCAAGTAATACATCTATTTCCACCCTCTGAGTTTACCTGTAGTAACATTCAATGCATAATGCCACTAAATTAAATTTATAATGTTAAAAGACACTGAACTATTTATATGAAAAAGAGAAACTAGACCAAGCATTACTTAAGAAAGAAAAGAAGAAAACAATCATTCAATAATTGATAGGACATAAAATGATAAAATGTTTTAAATGCTCAGAATTGTTTGTCTGTTTTTCACATGTCTGAAATGGTTGTATGAAGTTTATTGATGCGTGTAATGCATTAATAATTGATGGTGATGTGGTCTCTAACCTCGCTACTATAGTAAAGCACAGCGGGAGCTCAGATTGGACATGAATGCCATTCACCAGTGAAAATAACATCTTTCAAAGCATAAACAATATCTTATTGTTTTTAATTGATCAAGTTTGAGCATTTTATTTAGTTTTGTCCAATTTTTTTTTTTTTTTTTAAATAAAAAAAACTCTCCACAATATCAGTCGTGTTTTAAGCGTTCGAACTCTTTACGTCACATTAAAAAAATACACAGTGTTTTGTCGCCATCTAATGGAATATTTTAGGTAATCATATTCTTTACAAATTGTAGGTGTAAGTGTTGTGCGTCATGTTTGGAAGAATTGGATACATGTTACTTTGCTTATCGTTGTTATATTTACGATAAACACACACACACACACACACACACACACACACACAGTCTGGTTCATTATCCTTGTAGGGACTCTCCATAGACGTAATGGTTTTTATACTGTACAAACTGTATATTCTATCCCCTAAACCTACCCATCACAGAAAACTTTTCTGCATTTTTACATTTTCAAAAAAAAACATAATTTAGTATGTTTATTAATCCATTTCCCCCATGGGGACTGCTGGCCGGTCCCCACAATGTAGGTGATTTCAGGTTTTACTATCCTTGTGGGGACATTTCCTAATATAAACCTGTATACACACACACACACACACACAAAATTGTTGTCATTCCTGACAATTAAATTCTGACAATGAATTATATGGAATTTTCTTGAAACTCTAATTTCCTGTAACTCTCTTATTTACAAACGATCAGTGAAAGAAGATGAACATCTTAAAATATTCATTGCTACAATGTTTTATTTTGTATTATTTTAATATGGGGGTTAGCAGCAAAATGCAAAGATGTAGCACAGGTTTTAAAGACCCTAATTTGTCATTTTGGAGTTTTTTTGATTTATAATAAGTAGCCTATTAGTCAAAATTAAACGAATATTAAAATGAAATAGGCAATTGATGAATTATAAAAAATAAATCAATCAAAAGAACAGAACAATAGTCAACACTGTGTGTAAAAATTGGAGAGAATGGAACAAGATTTTTACTTCTCGCACTGCTGAAGGCGGCGTTCAAATGATGACTTCTTTCACATAACAAATTTACATTTTTGTAATTGGAATAAAATTACACTTTAACAGGGTAGCATGCAAAATATGGGACACACTGACAAAGCTAAATACTATGTTGTTAATTGCAATTAGTTGATTTAAAAAAAATGTTTACTAGAATCAAATGAAGATTAATTCAACAGGTAGGTGGGACAGGCCAAAATGACCGTTTAAGTAGGATTCAGATATTAATGTCTCTTTTAGGTCTTTATACTAGGTATAAAGGTATAATTTATGTTAGGTAATAGTTTATTAGACATATCTAAAAGGTCTAGGTGTACAAAGCATGTGTTTTCCCAATGTTAACAGGCTCAACCATTCCAGTCAGACTGTGAAAAATCTGGTCTGTGATCGCCACTAGATGTCGCGCTGCTACAATTAATTGGGAGTACAAGCCTTCAACATTTTTTGAGTGGAAAAGTAGTACGAAATTCCACAGGTAATAGAATTAAAACAATAAATAACATTTGGCTTGATGCTCAAAATATGATTTTTTAACGAAAACATTCGTCCCTTGAGAGAAAAAAAACCGTCATTAAAGAAAATTAGCAAAGGAATGTGTATGGCACACATTTTCCCCTCAAATTCTCTCTCCCTCTATTCCAAGTAATATGGTCTCAAATTTGCTTTGCAACACGAGTGGCGCGTGATTTTGCAACATTACGGGGTTCATGTGTTCGGATATAGCAACATTTCTAGGGAAGATTTTACAGTAGGGACTAAACAGTAAACCATGGCACCAACCGTTATACTTTTATCTTTGTTAACTTTTATTGTTGTTTTAGTTGGAGGAGTAACTAATTCACCTTCTCTTAAAAAATCATCTGCTGCATCATATAATTTAAATGACACTCAGACAACCTCTGCAACTGCAAGCGCGAGAGCCCGTATTAAACACAGAACCACCGGCACTTATGGAAACATCTCACCTACTAAGGTAAGCAGATTCTCCAAGAAGGTCAAACCCACTGAGGCGACCACCAGAACTCTGAAACCCACTGAGGGTGGCACCAAAACTCTGAAAGCCACGACATTTAAACCCACCCAGGCGACCACCAGAGCTCTGAAACCCACGACAGTGAAACCATTCAAGTCAACTAAGGGAACCACAACAGCTCTGAAGCCCACAGTGAAATGGACTGAGGTGAGCACGAAAGCCCTGAAACCAACAACAGTGAAGCCAACAGTAACAGCCACAAGGTCGACGACCACCCCAGTGCGCTTGCACACAGAGGACCTGAATGAAAACATTGATAAAAACGTGGAACGGAGAGTTTGGAACACAAAAGAAAGTGAAGAACCACCGGTATTTGAGTGTCCTCCTTTGGGTCTGGAGTCTCTGAAAGTTAAAGACTCGCAGATTCAGGCATCTTCTTACAAGCGCATGGGCCTGGGGCCACACAGGGGCCGACTCAACATACAGTCTGGTGTGGAGGATGGGGATATCTATGACGGAGCTTGGTGTGCCCAGTATAAAGACCAGAACCAATGGTTACAGGTGGATGCCAAGAAGCTCACACGGTTCACAGCAGTGATACTACAGGGTCGCAGCTCTATATGGAGCTTGGACTATGTTGAAACCTTCAAGGTTCAGGTTAGCAATGACACCATTAAATGGAAGCCATGCATGAACGGGACAGAAGAGGCGGTGTTTGAGGGGAACAAGGACAGCGAAACACCAGTCTTGGCCATTTTGCCCGAACCGGCGGTGGCACAATACATACGCATTAACCCTCAGACCTGGTTTAAGAATGGGACCATCTGCCTGAGAGCTGAAATTATGGGCTGTGAGCTGCCAGATCCAAACAATATCTACCCATGGCAAGCTGAGGAAGGCACCAAGGACAAACTGGACTTCAGACATCATAACTACAACGAGATGAGGAAGAATTATCAAATACCCTGGTGGAATATGCAGACTTTTGAATTTTCAATGCAGATTTTGGGAAAATCTGTGGAATTCCGGAATGTCTCAATGGATTCAAACATGGCACAAATTCGACGTGGGCGCAGTTATCAGTTTTTATGCTGTAATGAGAGCAATTGGAACATAGCCCGAAAACCCTCTGCCTCTCTTTCACTCACTCTCATTCAGTCTGATTTGCCCTGTCTATTTACACTGGGCAACTCTAGTGTTTGCATTGGCCTGTGGGCTAGAGGTGAACCTGAGTTCCGCTATGTGGCCGGTATGCATGGAAACGAAGTGCTTGGGAGGGAAGTACTGCTCAACCTGATGGAGTACATATGCCAGGAGTACAAACGTGGAAATCAGCGCATAGTTCACCTAGTCAAAGAGACACGCATTCATCTTCTACCCTCGATGAACCCTGATGGCTATGAAATGGCTTACAAAAAGGGTTCAGAGCTGGCCGGATGGGCGCTGGGTCGCTATAGTTATGAAGGCATTGACATGAATCACAACTTTGCAGATCTGAACACAGTGATGTGGGATGCCATTGAGCTAGAATCAGACAAGTCTAAACTAATCAATCACTACTTTCCCATTCCAGAGCACTACACTTCAGAAGATGCTATGGTGGCTCCAGAAACGAGAGCTGTCATCAGCTGGATGCAGACTATACCATTTGTTCTCAGCGCTAACCTGCATGGAGGAGAGCTGGTGGTCACCTACCCGTTTGACATGACCAAAGACTGGGCCCCTAAAGAGCACACGCCCACCCCCGATGACAGCTTTTTCCGCTGGCTGGCCACCGCTTATGCCAGCACCAACCATGTGATGTCCAACCCAGACCGAAGGCCCTGCCACAATGAGGATTTCCTTCGTTATAATAACATTATTAATGGAGCGAACTGGCACACTGTGCCAGGCAGACAATGTGCAAACAATGCATTTGTCAATATTTGTCATCAGGTGCACAGAGGAATCAAAGGAGTGGTTAGGGACAAAGACACTGAAGCCGGCATCGCTGATGCCATCATTAAAGTGGATGACATCGACCATCACATAAGATCAGCTTTTGATGGGGACTTCTGGCGTCTGTTGAACCCTGGTGACTATGACATCACAGTGACCGCAGAGGGATATTTCCCTGCCACTCGAAGTTGCAGGGTCGAGTATGAACATTACCCCACTATCTGCGACTTCCACCTTACCAAGACACCAAAACAGCGGCTGAGAGAGATCCTGGCCAAGGGCGGCAAGATTCCAAAAGACCTGCAGCTTAGACTCCGGCAGCTGCGCATAAGGAAACTACGTGCCAGTACTAAGCTTATTAACCAACGCAGGATGTCACAGCAGCGCAGGGCTAGGGGGGCCCACAACTAGACTGACCTTTAACCTCTGACCTGCTGGCCAAGTACAGAATTAAACTGTATCAATGTCCAGGGCAAATGCAATTTAGATGGGCCTGTAAGTAGATTTGCCCTTTTCTGTGGTAACATACATTTTATATTATAGATTTGAGGATTTGTAAATTAAATTTCACACAAAAATGTCTCAAAACTGTTTTATACTTTTATACTTGACACTGTTATTGATAATGTCAATTAAAAATGATGCTGTTGTTGGAAAGTTTGATTTTTATGTTAATCTGTGCCCACATTTGTGCATAGAGGCGCAAATACAACATCTCAGTCTGGAACTGATGTCTTGTCAAATGGTTTCTTTAGCTGTTCAATGTTTATATTTTGTCTGCTATATATTCGTCAAGAGCTGATATCTGCTGAAATATATACCGAATATAATGCTCATAAAAGCACTTGGATGTTTTGTTTTTAAGGAAACTGTTGCCCAAAATAATTTAAATAACAGCAATAACACCACTGGTATTAAGATAAACATACAAAAAACAACATACCTCAATATGACAAGCACTCCTAATATCTAAATATAAGTAGTTACAGAGATCCGAATGAAATGGGAATCATTTGTAAATAACTAAACTTTTTTAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_02127038_02149249.mRNA True 5954 mRNA 0.39 13 2126408 2152020

Neighbor

gene id symbol gene type direction distance location
CI01000000_02119737_02125356 NA coding downstream 1052 2119513 ~ 2125356 (-)
CI01000000_02110517_02117247 NA coding downstream 9161 2110481 ~ 2117247 (-)
CI01000000_02088219_02091989 NA coding downstream 34300 2087915 ~ 2092108 (-)
CI01000000_02044627_02071415 B4GALT1, B4GALT1L coding downstream 54885 2044275 ~ 2071523 (-)
CI01000000_01999025_02018302 TCERG1 coding downstream 108106 1998132 ~ 2018302 (-)
CI01000000_02356194_02395660 EBF3, EBF1 coding upstream 204120 2356140 ~ 2395660 (-)
CI01000000_02412118_02437900 NA coding upstream 260031 2412051 ~ 2438101 (-)
CI01000000_02461645_02466865 NA coding upstream 309625 2461645 ~ 2466865 (-)
CI01000000_02554934_02555230 NA coding upstream 402559 2554579 ~ 2555230 (-)
CI01000000_02595861_02603891 NA coding upstream 443841 2595861 ~ 2603891 (-)
G1260 NA non-coding downstream 27045 2095997 ~ 2099363 (-)
G1298 NA non-coding downstream 97220 2028892 ~ 2029188 (-)
G1269 NA non-coding downstream 144829 1960144 ~ 1981579 (-)
G1266 NA non-coding downstream 207033 1919129 ~ 1919375 (-)
G1254 NA non-coding downstream 216679 1909522 ~ 1909729 (-)
G1332 NA non-coding upstream 9733 2161753 ~ 2162405 (-)
G1331 NA non-coding upstream 12079 2164099 ~ 2165266 (-)
G1366 NA non-coding upstream 47570 2199590 ~ 2199851 (-)
G1376 NA non-coding upstream 54758 2206778 ~ 2207000 (-)
G1385 NA non-coding upstream 69843 2221863 ~ 2222104 (-)
G1270 NA other downstream 148072 1924081 ~ 1978336 (-)
CI01000000_01357072_01359013 NA other downstream 766470 1355476 ~ 1359013 (-)
G1077 NA other downstream 775230 1332179 ~ 1351178 (-)
CI01000000_00683745_00689383 NA other downstream 1436955 682205 ~ 689610 (-)
G795 NA other downstream 1968418 157542 ~ 157990 (-)
CI01000000_03172562_03175863 HIGD2A other upstream 1018371 3170391 ~ 3175863 (-)
CI01000000_03245643_03246684 NA other upstream 1093114 3245134 ~ 3246721 (-)
CI01000000_03564077_03564373 NA other upstream 1414679 3562887 ~ 3567571 (-)
G2484 NA other upstream 1418046 3570066 ~ 3573554 (-)
CI01000000_04079738_04081018 MIF other upstream 1926101 4078121 ~ 4081117 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_007576 cpxm1b coding NC_007125.7 CM002898.2 52323322 ~ 52354463 (+)