smim14 (smim14,LOC107757606,LOC107700293)


Basic Information

Item Value
gene id smim14
gene name smim14,LOC107757606,LOC107700293
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 13154486 ~ 13159444 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4379
TCAACGTCAGCGCGAGCTACTTGCCATGCACGAACCGAGCCTTCGCCGTAGTAGCATTCCTAATTTTTGCTTCCCGATCATTATCAAAACACAGACGGAACATCAGCCGGAGCTGGGGCCCGTTGCCAAACACCAGTGTGCACAAGGGAGCATTCGCACTGGATTTGGCCTGTGCTGGCGGAGGCTCGCGGGGGTCAGTAGTCACATTTCGGTCCTCCAGGTTTGAGGCGAATGGTTTTAAATCCCTTCGAGTGAGTTGTCGAAGTCGTCGAAGAGGATGGCAGAGGGAGGTTTTGACCCCTGTGAGTGCATCTGCTCTCATGAACATGCCATGAGGAGACTCATCAGTCTGCTGAGACAGTCCCAGTCCTACTGTACAGACACAGAGTGCCTTCAGGAGATGCCAGGCCCTAACTCCTCTGTCGAAGGGGACATCACTCTGCCCATGATTATTATGGGATGGCTAGTTCTAGCTCTCATGCTCTTCTTGCTCCGCCCAGCCAGCTTGAGAGGCCCTTCAGCCAGCAGCAAGCCCTCTGGTCCCCGCGGTAATCGCGGCAGAGAGCCACCAGCACCTCCTGTGGACTAGAGCtttttccaccacaaaagatTTGATCTTTTAATCCATCTTCCACCTGATCAACTACTGTGACTAATATAACTTGTTAGTTTCCTTAATCATCTATCAGTGTTTCAGATTCCAGAGACTTTAGTCCGATGAAGGGGAGGGTGACGCTGAAAATGCTGAATTGTTGGAGTCTAAAGTTTCCCggatttatatatctatatatatatatatatcttattatatacttatatatattttattttattttattataaagcattattAGGTATTTAACAATTGGTAAAATCACATATAGGCCTATATAATGACATTTGTCCTAGatcatatgaatatgaattgtGATCTAGAAATTGGGTGTTGTCAAAAGATTTGGGTTGGTTTTGAGTAGACTGAAGTAAAAAGGATAATGTTTCTTGTCCTTTGGAGACCAGTACATTCCAAAGCTGTGATGACTTCACAGACATGATGTCATGATGAGAATGAGTCATTCTAAAGAcagatgcaattaaaatgatttaagattGACCAAGACCATTTCCAGTAGAGaccagtagaaaaaaaaagtagtataaGAGGAAAGAATGAAATGTGCGTATTCCAGTTTTGACGTCATGGCTGTGTGGATGTTGTCATGTTCTGGGATCTGTTGACCACAGAGAGGTGGCTGATTAAAAGCAGACCTCTCCACCCTGAAGGCTTTCTATTTACCCTTTATGTACAAAAATCACTAGATTTTTGTTGCTAGCATAGCCACTTGAATGCCGCTCTtaagacttttcttttttgcatttgctcAGGAATCATTATGTAGCTATACTTAAACAGTTGGTCAAATAGTATGGGTAACTGTCAAATGTCAGTGATGAAAGTCTGAAAGCAATGTAATCTTTAAAATTGATAAGAAAAATTGGGTACTTGGGAATTAAGGGCGAATTGACTAATAGTAGCACTTTGGTTGTGGCACCTTTTACAGTTGTGTACAGAATGCAAAGCTCCAGAAAAGCACCAAAGAGAGGATGTAAATGTGCCCCATTTCAAGTTTGGTGTAGCTTACTCAAACTTCCTGTCTTTTAAGTTCTGTGAGAATGTTAGAATGTCTTATTTGGTGCAATTAGCTGGACTAAGGATTTCTGGATGGATCggttgtggtggtggtggtgtggaTTTCAGGGCATGAAAAGTCTGTCTATGTACACTGTTATAATGAAACTGCTCTGTGAGAAAGGGCTTGATCTATGCACTTTtgtttactacaaataaatatgaataatagcA
>XM_043243982.1
CGCACAATTGGACGCCTCAGGACAGATACAAATCAACGTCAGCGCGAGCTACTTGCCATGCACGAACCGAGCCTTCGCCGTAGTAGCATTCCTAATTTTTGCTTCCCGATCATTATCAAAACACAGACGGAACATCAGCCGGAGCTGGGGCCCGTTGCCAAACACCAGTGTGCACAAGGGAGCATTCGCACTGGATTTGGCCTGTGCTGGCGGAGGCTCGCGGGGGTCAGTAGTCACATTTCGGTCCTCCAGGTTTGAGGCGAATGGTTTTAAATCCCTTCGAAAGAGGATGGCAGAGGGAGGTTTTGACCCCTGTGAGTGCATCTGCTCTCATGAACATGCCATGAGGAGACTCATCAGTCTGCTGAGACAGTCCCAGTCCTACTGTACAGACACAGAGTGCCTTCAGGAGATGCCAGGCCCTAACTCCTCTGTCGAAGGGGACATCACTCTGCCCATGATTATTATGGGATGGCTAGTTCTAGCTCTCATGCTCTTCTTGCTCCGCCCAGCCAGCTTGAGAGGCCCTTCAGCCAGCAGCAAGCCCTCTGGTCCCCGCGGTAATCGCGGCAGAGAGCCACCAGCACCTCCTGTGGACTAGAGCtttttccaccacaaaagatTTGATCTTTTAATCCATCTTCCACCTGATCAACTACTGTGACTAATATAACTTGTTAGTTTCCTTAATCATCTATCAGTGTTTCAGATTCCAGAGACTTTAGTCCGATGAAGGGGAGGGTGACGCTGAAAATGCTGAATTGTTGGAGTCTAAAGTTTCCCggatttatatatctatatatatatatatatcttattatatacttatatatattttattttattttattataaagcattattAGGTATTTAACAATTGGTAAAATCACATATAGGCCTATATAATGACATTTGTCCTAGatcatatgaatatgaattgtGATCTAGAAATTGGGTGTTGTCAAAAGATTTGGGTTGGTTTTGAGTAGACTGAAGTAAAAAGGATAATGTTTCTTGTCCTTTGGAGACCAGTACATTCCAAAGCTGTGATGACTTCACAGACATGATGTCATGATGAGAATGAGTCATTCTAAAGAcagatgcaattaaaatgatttaagattGACCAAGACCATTTCCAGTAGAGaccagtagaaaaaaaaagtagtataaGAGGAAAGAATGAAATGTGCGTATTCCAGTTTTGACGTCATGGCTGTGTGGATGTTGTCATGTTCTGGGATCTGTTGACCACAGAGAGGTGGCTGATTAAAAGCAGACCTCTCCACCCTGAAGGCTTTCTATTTACCCTTTATGTACAAAAATCACTAGATTTTTGTTGCTAGCATAGCCACTTGAATGCCGCTCTtaagacttttcttttttgcatttgctcAGGAATCATTATGTAGCTATACTTAAACAGTTGGTCAAATAGTATGGGTAACTGTCAAATGTCAGTGATGAAAGTCTGAAAGCAATGTAATCTTTAAAATTGATAAGAAAAATTGGGTACTTGGGAATTAAGGGCGAATTGACTAATAGTAGCACTTTGGTTGTGGCACCTTTTACAGTTGTGTACAGAATGCAAAGCTCCAGAAAAGCACCAAAGAGAGGATGTAAATGTGCCCCATTTCAAGTTTGGTGTAGCTTACTCAAACTTCCTGTCTTTTAAGTTCTGTGAGAATGTTAGAATGTCTTATTTGGTGCAATTAGCTGGACTAAGGATTTCTGGATGGATCggttgtggtggtggtggtgtggaTTTCAGGGCATGAAAAGTCTGTCTATGTACACTGTTATAATGAAACTGCTCTGTGAGAAAGGGCTTGATCTATGCACTTTtgtttactacaaataaatatgaataatagcA
>XM_043243993.1
TGGACGCCTCAGGACAGATACAAATCAACGTCAGCGCGAGCTACTTGCCATGCACGAACCGAGCCTTCGCCGTAGTAGCATTCCTAATTTTTGCTTCCCGATCATTATCAAAACACAGACGGAACATCAGCCGGAGCTGGGGCCCGTTGCCAAACACCAGTGTGCACAAGGGAGCATTCGCACTGGATTTGGCCTGTGCTGGCGGAGGCTCGCGGGGAAGAGGATGGCAGAGGGAGGTTTTGACCCCTGTGAGTGCATCTGCTCTCATGAACATGCCATGAGGAGACTCATCAGTCTGCTGAGACAGTCCCAGTCCTACTGTACAGACACAGAGTGCCTTCAGGAGATGCCAGGCCCTAACTCCTCTGTCGAAGGGGACATCACTCTGCCCATGATTATTATGGGATGGCTAGTTCTAGCTCTCATGCTCTTCTTGCTCCGCCCAGCCAGCTTGAGAGGCCCTTCAGCCAGCAGCAAGCCCTCTGGTCCCCGCGGTAATCGCGGCAGAGAGCCACCAGCACCTCCTGTGGACTAGAGCtttttccaccacaaaagatTTGATCTTTTAATCCATCTTCCACCTGATCAACTACTGTGACTAATATAACTTGTTAGTTTCCTTAATCATCTATCAGTGTTTCAGATTCCAGAGACTTTAGTCCGATGAAGGGGAGGGTGACGCTGAAAATGCTGAATTGTTGGAGTCTAAAGTTTCCCggatttatatatctatatatatatatatatcttattatatacttatatatattttattttattttattataaagcattattAGGTATTTAACAATTGGTAAAATCACATATAGGCCTATATAATGACATTTGTCCTAGatcatatgaatatgaattgtGATCTAGAAATTGGGTGTTGTCAAAAGATTTGGGTTGGTTTTGAGTAGACTGAAGTAAAAAGGATAATGTTTCTTGTCCTTTGGAGACCAGTACATTCCAAAGCTGTGATGACTTCACAGACATGATGTCATGATGAGAATGAGTCATTCTAAAGAcagatgcaattaaaatgatttaagattGACCAAGACCATTTCCAGTAGAGaccagtagaaaaaaaaagtagtataaGAGGAAAGAATGAAATGTGCGTATTCCAGTTTTGACGTCATGGCTGTGTGGATGTTGTCATGTTCTGGGATCTGTTGACCACAGAGAGGTGGCTGATTAAAAGCAGACCTCTCCACCCTGAAGGCTTTCTATTTACCCTTTATGTACAAAAATCACTAGATTTTTGTTGCTAGCATAGCCACTTGAATGCCGCTCTtaagacttttcttttttgcatttgctcAGGAATCATTATGTAGCTATACTTAAACAGTTGGTCAAATAGTATGGGTAACTGTCAAATGTCAGTGATGAAAGTCTGAAAGCAATGTAATCTTTAAAATTGATAAGAAAAATTGGGTACTTGGGAATTAAGGGCGAATTGACTAATAGTAGCACTTTGGTTGTGGCACCTTTTACAGTTGTGTACAGAATGCAAAGCTCCAGAAAAGCACCAAAGAGAGGATGTAAATGTGCCCCATTTCAAGTTTGGTGTAGCTTACTCAAACTTCCTGTCTTTTAAGTTCTGTGAGAATGTTAGAATGTCTTATTTGGTGCAATTAGCTGGACTAAGGATTTCTGGATGGATCggttgtggtggtggtggtgtggaTTTCAGGGCATGAAAAGTCTGTCTATGTACACTGTTATAATGAAACTGCTCTGTGAGAAAGGGCTTGATCTATGCACTTTtgtttactacaaataaatatgaataatagcA
>XM_043244004.1
CTCATCTGTTAATTCCACCACATCAATGCACGAAGTCTACTACGGCAAAGCCTTCGCTCGCGTCTATGAACGCGCCGGGCGTTATGTTCGTCCAGGCCGCCCCGCTGATTGGCTGAACCGCGGTCGCTGGCGAGTTGAAGGCTTCgctcatgaataataattacGCCGCACAATTGGACGCCTCAGGACAGATACAAATCAACGTCAGCGCGAGCTACTTGCCATGCACGAACCGAGCCTTCGCCGTAGTAGCATTCCTAATTTTTGCTTCCCGATCATTATCAAAACACAGACGGAACATCAGCCGGAGCTGGGGCCCGTTGCCAAACACCAGTGTGCACAAGGGAGCATTCGCACTGGATTTGGCCTGTGCTGGCGGAGGCTCGCGGGGGTCAGTAGTCACATTTCGGTCCTCCAGGTTTGAGGCGAATGGTTTTAAATCCCTTCGAAAGAGGATGGCAGAGGGAGGTTTTGACCCCTGTGAGTGCATCTGCTCTCATGAACATGCCATGAGGAGACTCATCAGTCTGTGCCAGGCCCTAACTCCTCTGTCGAAGGGGACATCACTCTGCCCATGATTATTATGGGATGGCTAGTTCTAGCTCTCATGCTCTTCTTGCTCCGCCCAGCCAGCTTGAGAGGCCCTTCAGCCAGCAGCAAGCCCTCTG
>XM_043244015.1
GGAGCTGGGGCCCGTTGCCAAACACCAGTGTGCACAAGGGAGCATTCGCACTGGATTTGGCCTGTGCTGGCGGAGGCTCGCGGGGGTCAGTAGTCACATTTCGGTCCTCCAGGTTTGAGGCGAATGGTTTTAAATCCCTTCGAGTGAGTTGTCGAAGTCGTCGAAGAGGATGGCAGAGGGAGGTTTTGACCCCTGTGAGTGCATCTGCTCTCATGAACATGCCATGAGGAGACTCATCAGTCTGCTGAGACAGTCCCAGTCCTACTGTACAGACACAGAGTGCCTTCAGGAGATGCCAGGCCCTAACTCCTCTGTCGAAGGGGACATCACTCTGCCCATGATTATTATGGGATGGCTAGTTCTAGCTCTCATGCTCTTCTTGCTCCGCCCAGCCAGCTTGAGAGGCCCTTCAGCCAGCAGCAAGCCCTCTGGTCCCCGCGGTAATCGCGGCAGAGAGCCACCAGCACCTCCTGTGGACTAGAGCtttttccaccacaaaagatTTGATCTTTTAATCCATCTTCCACCTGATCAACTACTGTGACTAATATAACTTGTTAGTTTCCTTAATCATCTATCAGTGTTTCAGATTCCAGAGACTTTAGTCCGATGAAGGGGAGGGTGACGCTGAAAATGCTGAATTGTTGGAGTCTAAAGTTTCCCggatttatatatctatatatatatatatatcttattatatacttatatatattttattttattttattataaagcattattAGGTATTTAACAATTGGTAAAATCACATATAGGCCTATATAATGACATTTGTCCTAGatcatatgaatatgaattgtGATCTAGAAATTGGGTGTTGTCAAAAGATTTGGGTTGGTTTTGAGTAGACTGAAGTAAAAAGGATAATGTTTCTTGTCCTTTGGAGACCAGTACATTCCAAAGCTGTGATGACTTCACAGACATGATGTCATGATGAGAATGAGTCATTCTAAAGAcagatgcaattaaaatgatttaagattGACCAAGACCATTTCCAGTAGAGaccagtagaaaaaaaaagtagtataaGAGGAAAGAATGAAATGTGCGTATTCCAGTTTTGACGTCATGGCTGTGTGGATGTTGTCATGTTCTGGGATCTGTTGACCACAGAGAGGTGGCTGATTAAAAGCAGACCTCTCCACCCTGAAGGCTTTCTATTTACCCTTTATGTACAAAAATCACTAGATTTTTGTTGCTAGCATAGCCACTTGAATGCCGCTCTtaagacttttcttttttgcatttgctcAGGAATCATTATGTAGCTATACTTAAACAGTTGGTCAAATAGTATGGGTAACTGTCAAATGTCAGTGATGAAAGTCTGAAAGCAATGTAATCTTTAAAATTGATAAGAAAAATTGGGTACTTGGGAATTAAGGGCGAATTGACTAATAGTAGCACTTTGGTTGTGGCACCTTTTACAGTTGTGTACAGAATGCAAAGCTCCAGAAAAGCACCAAAGAGAGGATGTAAATGTGCCCCATTTCAAGTTTGGTGTAGCTTACTCAAACTTCCTGTCTTTTAAGTTCTGTGAGAATGTTAGAATGTCTTATTTGGTGCAATTAGCTGGACTAAGGATTTCTGGATGGATCggttgtggtggtggtggtgtggaTTTCAGGGCATGAAAAGTCTGTCTATGTACACTGTTATAATGAAACTGCTCTGTGAGAAAGGGCTTGATCTATGCACTTTtgtttactacaaataaatatgaataatagcA

Function

symbol description
smim14 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human SMIM14 (small integral membrane protein 14).

NR:

description
PREDICTED: small integral membrane protein 14

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4379 False 1864 TUCP 0.42 5 13154486 13159246
XM_043243982.1 True 1876 mRNA 0.42 5 13154486 13159278
XM_043243993.1 False 1810 mRNA 0.41 5 13154486 13159270
XM_043244004.1 False 668 mRNA 0.54 3 13156838 13159444
XM_043244015.1 False 1756 mRNA 0.41 5 13154486 13159138

Neighbor

gene id symbol gene type direction distance location
ugdh ugdh,LOC107757604,LOC107700292 coding downstream 462 13147444 ~ 13154024 (-)
rpl9 rpl9,LOC107671920,LOC107700291,LOC107709470 coding downstream 13142 13137427 ~ 13141344 (-)
rfc1 rfc1,LOC107709439,LOC107700290,LOC107757601 coding downstream 18072 13123871 ~ 13136414 (-)
adgrl3.1 adgrl3.1,LOC107709467,LOC107671918,LOC107702411 coding downstream 69983 12993244 ~ 13084503 (-)
qdprb.1 qdprb1,qdpr,LOC107750446,LOC107702409,LOC108437732 coding downstream 187979 12963598 ~ 12966507 (-)
pds5a pds5a,LOC107757607,LOC107700294 coding upstream 8715 13168159 ~ 13189762 (-)
trnar-ucg NA coding upstream 58950 13218394 ~ 13218468 (-)
trnar-ucg_1 NA coding upstream 59852 13219296 ~ 13219368 (-)
trnae-cuc NA coding upstream 61356 13220800 ~ 13220873 (-)
trnar-ucu NA coding upstream 62138 13221582 ~ 13221654 (-)
G3020 NA non-coding downstream 266833 12886776 ~ 12887653 (-)
G2891 NA non-coding downstream 536444 12617768 ~ 12618042 (-)
G2889 NA non-coding downstream 559192 12592441 ~ 12595294 (-)
G2882 NA non-coding downstream 604247 12549922 ~ 12550239 (-)
G2842 NA non-coding downstream 698914 12455354 ~ 12455572 (-)
G3070 NA non-coding upstream 46343 13205787 ~ 13206826 (-)
G3074 NA non-coding upstream 135253 13294697 ~ 13295015 (-)
G3080 NA non-coding upstream 143309 13302753 ~ 13313529 (-)
trnar-ucg_68 NA non-coding upstream 228990 13388434 ~ 13388506 (-)
trnar-ucg_69 NA non-coding upstream 229809 13389253 ~ 13389325 (-)
smim18 NA other downstream 181474 12969093 ~ 12973012 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other downstream 228004 12904199 ~ 12926482 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other downstream 788378 12337962 ~ 12366108 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other downstream 1037103 12097910 ~ 12117383 (-)
apela NA other downstream 1365820 11783629 ~ 11788666 (-)
G3072 NA other upstream 131852 13291296 ~ 13291723 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other upstream 670019 13829463 ~ 13842664 (-)
LOC122350629 gatb,LOC107695556,LOC106602370,LOC107695902 other upstream 722449 13881893 ~ 13895284 (-)
usp53b fabp2,usp53b,LOC107580697,LOC107572698,LOC107714652,LOC107695415,LOC107700316,LOC107598280 other upstream 1502030 14661474 ~ 14687860 (-)
myoz2b myoz2,myoz2b,LOC107695402,LOC107700320 other upstream 1527152 14686596 ~ 14714546 (-)

Expression


Co-expression Network