zcchc7 (LOC107709449,LOC107655886,LOC107548354)


Basic Information

Item Value
gene id zcchc7
gene name LOC107709449,LOC107655886,LOC107548354
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12499771 ~ 12544141 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043243721.1
TTGCACTATGAACAAGAATGGCAATAACTAAAACAATCCCCAGACTCAAGAGTGACTGACCTTCCGTGCGTGTGCTATGTAGCGCTTTTCCCAGGTAAGAATGCTAGTTGGCCAACCATTTAATTTTCCTGCGGAGTCCGGAAGCGGGTGTCCCTGAGTTGCAAATCGGAATTTATAAACAGGGCTCTCCTTGAGATGTTCTCAGGGTTTCAGAAGTGGGATGACTACGAGGACGAGTTGTACCAGGACGATGAAGACTCGAGTTTGTCTGACACTAACAGTGAGCTGGAGTTCCAGCTTTATTCCCAACTGCACTACAGCGCTGAGATCCAAGAGGATCCCGAGGACTCGAGAGAGGTCCAGTCATCAGTACCACCGACTCGAACACAGCAGAAACCCTTGCCTCCTGCTCCACCTGTAGATGTTATCGTGATTGACTCTGGCACAGATGCCATCACGGTGTCAGACAACACGGAGGACGATGACAGCGTCTGTAATAGAAAGGGTCAATCGTCATCAAAACTTTGGAACAGGAAGTTGCAGACCCATAGCTTGCTTTCGCCCTCTCTGCCACAAGTTCAAGCAAGAAGGAGCTCCCCAGTTGATGTTGTTGTGTTGAATTCTGATTCAGACGACTCTTCTGAATCTGTACCTCCTTTTGTGGAGGATCTGGATTCGGACTCGGATGGGACGGAGAACTGGATGATCCTGGGCCTGGACAAACAGGATGGAGATCAGAACATACAGCTCAACCTCTCCGTAGAAGAACATGCAAATGATGAAGAGAATAAACAGATCTGGGCTGTGTCAAAAAAGGATAAAGAGgctcAGATCTTTAATAAAGGGTTTTCCCGGAGGCGTCTTTCAGGCCGTTACTACGCTGAAAAATCCATCACGTGTCACAACTGCAAAAAGTCCGGCCATCTCTCCAAAAACTGCCCCACACCAAAGAAGGTGCCGTGCTGCTCATTATGTGGGGTTCAGGGACATGTTCTGAGGATTTGTCCAAACCGTTACTGTTCTAACTGCTCTCTGCCCGGCCACATCAGTGACAACTGTCTGGAGAAAGCTTACTGGCACAAACGCTGCCACCGCTGTGACATGACTGGACACTTCTCTGACGCTTGCCCAGAAATCTGGAGACAGTATCACATTACGaCCACTAAGGGACCTCTCTGCAAAGCCAGTGATCCAGAGGCCTCCAGGAAACCTGCTTACTGTTATAACTGCTCTATGAAAGGACACTTCGGCCATgAATGCACCCGGAGGAGAATGTACAACGGGACGTATCCCACCCTGCCATTTATTTCCCGTTACGACACGAAGGATCACTTCCATTTCCGGGAAATTCGAATCGAAAAGCAGGCCAGAGAACTTGAGCGAGCCGGATTGCTTTCACCTGACAGAGCCGTCGTTATACACACCCCCCAACCTccgaaaaagaaacaaaaaaccaGCCACAAACAGTCTCCATACCCATACAGCGCTCACAGCAACAACCAGTACACACCGAAAAGACGCATtgcacacacacccaaacacacacacttcaacgTCCAGAAGAACCACGGCAAACACACCCCTAAGTTTAATGAagccaaaaagaagaaaaaagtaaaaagcaaaacacaatCTGAAGTCATTGTTATAGATGAAGATGCAGACTTTCCTAGAGGTTGCAAAAAGAGCCTTCACAAGACAAGAGATGTTTCATCAGCCAACGTGAAGCCGAAGAAGTTCTTcggaaaggaaaagaacaataaaaaggacaaaataacaaaaaagaaggAGAGGAAATGGCAAAAGAGAGAACGGAAAGCTGCTAAAGATTCTTCCATGTATCCCTCTGATGAAAACCTTTTTCTGATTAAGCAAAGAAAGGTAAAAGGtaggaaaaacatttaaaagggaTGTCAAGCGATTCATATGAGAGTGAATGAATCGTCAGGTGGTTCACCTTCTACTTGTGATTGCTTTCGGTCCGTTCTCTTCCAATTCACATGGTTTTGAATACAGTATTACGCCTTTTTAAGTTGCTCTTTAAAGACAAATTCTACTCAAATCAGACCCTCTCACCCAAATTCTGTCAATTTCTCAGTGCTTGGCTTTTATTCATATACTAATTTGACATCAAAAAGTGCAAAATTTTGGGAAAGATTTAATGTTTAGCAAATTCAGGTATTTTAAAAGCAGGTGTTGAGCTTGTACATGGCCACTTGAtagatttttctattttatgtaCATGCTGACTTCTGTAACATTGTGATTAAATTAAAGTCTGTTTGTATTGATA

Function

NR:

description
PREDICTED: zinc finger CCHC domain-containing protein 7-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K12597 AIR1_2; protein AIR1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043243721.1 True 2293 mRNA 0.45 10 12499771 12544141

Neighbor

gene id symbol gene type direction distance location
adamtsl7 LOC107709448,LOC107750434,LOC107702297,LOC107570220 coding downstream 5446 12477518 ~ 12494325 (-)
LOC122342847 NA coding downstream 59326 12437822 ~ 12440445 (-)
LOC122342838 NA coding downstream 64873 12429730 ~ 12434898 (-)
ncapd3 ncapd3,LOC107655906,LOC107709432,LOC107750432,LOC107702392 coding downstream 80491 12407369 ~ 12419280 (-)
wdr19 wdr19,LOC107591558,LOC107750430 coding downstream 93216 12390944 ~ 12406555 (-)
melk melk,LOC107709443,LOC107702285,LOC107570222 coding upstream 63625 12607766 ~ 12617282 (-)
LOC122348170 frmpd1,LOC107709451,LOC107655878,LOC107548301,LOC107750435,LOC107702397,LOC107570223 coding upstream 74342 12618483 ~ 12643576 (-)
chrna8 LOC107709454,LOC107655813,LOC107548356,LOC107562618,LOC107702399,LOC108410819 coding upstream 180433 12724574 ~ 12772830 (-)
chrnb3a chrnb3a,LOC107562617,LOC107655822,LOC107548357,LOC107709455,LOC107702298,LOC107750476 coding upstream 234448 12778589 ~ 12794404 (-)
chrna6 chrna6,LOC107709456,LOC107655806,LOC107750436,LOC108260984,LOC108412407 coding upstream 272614 12816755 ~ 12823474 (-)
G2842 NA non-coding downstream 44199 12455354 ~ 12455572 (-)
G2841 NA non-coding downstream 45002 12454231 ~ 12454769 (-)
LOC122348535 ncapd3,LOC107709432,LOC107702392,LOC107750432,LOC107655906,LOC107591581 non-coding downstream 55888 12427167 ~ 12443883 (-)
G2837 NA non-coding downstream 57328 12426213 ~ 12442443 (-)
G2882 NA non-coding upstream 5781 12549922 ~ 12550239 (-)
G2889 NA non-coding upstream 48300 12592441 ~ 12595294 (-)
G2891 NA non-coding upstream 73627 12617768 ~ 12618042 (-)
G3020 NA non-coding upstream 342635 12886776 ~ 12887653 (-)
G3070 NA non-coding upstream 661646 13205787 ~ 13206826 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other downstream 133663 12337962 ~ 12366108 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other downstream 382388 12097910 ~ 12117383 (-)
apela NA other downstream 711105 11783629 ~ 11788666 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other downstream 919054 11514151 ~ 11580717 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other downstream 986938 11510439 ~ 11512833 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other upstream 360058 12904199 ~ 12926482 (-)
smim18 NA other upstream 424952 12969093 ~ 12973012 (-)
smim14 smim14,LOC107757606,LOC107700293 other upstream 610345 13154486 ~ 13159444 (-)
G3072 NA other upstream 747155 13291296 ~ 13291723 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other upstream 1285322 13829463 ~ 13842664 (-)

Expression


Co-expression Network