LOC122352433 (LOC107741179,LOC107686204,LOC107589583,LOC107583407,LOC107579158,LOC107743479,LOC107583406,LOC107589561)


Basic Information

Item Value
gene id LOC122352433
gene name LOC107741179,LOC107686204,LOC107589583,LOC107583407,LOC107579158,LOC107743479,LOC107583406,LOC107589561
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 14043687 ~ 14046052 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249849.1
tcagctgatttgggagCGTTTCGGAGTCACTCAGGTAACATGAGCTCCATGCAGTCAAACTCCTCTGCAAATGTGACTTTTGTTCGTCCTGCTACATTTTTCCTCATGGGCTTTTCTAACATACCACATGTGAAATACTACTATGTCTTCTTGTCTTTAGTGTATGTTGTGACTGTTTTAGGGAATTCATTTATCATGTGTATCATTTATTCAATCCGCAGACTCCACACAGCCAAATATATAGCTGTTTTTCATTTAGCCCTTTCTGATCTGTGTGGAAGCTCAGCTTTGATTCCAAAAGTCAtggacacatttttatttgagcacCAATTTGTTTCATATGAAGCATGTTTTGCATACATGTTTTTTGTATATCATTTCATGAATCTCCAGTCTTTGACACTGCTTGTTTTGGCTTATGACAGGTTAGTAGCAATTTGTTTTCCTCTGCGGTATCATGTCATTGTAACCAAACCAGCCATGTTTCTGATCCTAGGGGTGATGTGGATATTTTCTGTGACACATTTTTCTGTACTTGTAGTTTTGGTGAATAGACTCTACTTTTGTAGTTCTAATGTGgttaatagttatttttgtgATCATCGCCCTGTCTATAGACTAGCCTGTAATGATAATTCTATGAATATTTTGATAGGAAAAATTACCTTTGGTCTCCTGATTTGCACACCACTCATACTGATCATCATCACATATTTCTGCATTGCTCTGGCTTTGCTTAAGATTGCTCACGGAGCTGACCGGATCAAAGCCATGAAAACCTGCACCTCTCATCTCATGTTGGTGGCGATCAGTTATCTCCCAATAATaagcaataatatttcatctATAACAACATATTCTGATCCGAACGCCGGGATAATTAACACTTCTCTGACACAGACAATGCCACCTATGCTGAATCCCATCATATACACTCTAAAGACAGAGGAGGTCATGCAATCCGTAAAAGACCTGTACAAACGACGCAAGGTGAACACTAttaaagaaagaaggatgaaatgCAGgagtaataaaacataa

Function

NR:

description
PREDICTED: olfactory receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249849.1 True 1041 mRNA 0.38 2 14043687 14046052

Neighbor

gene id symbol gene type direction distance location
LOC122352432 LOC107741179,LOC107686204,LOC107589583,LOC107583407,LOC107579158,LOC107743479,LOC107743480,LOC107697403 coding downstream 7363 14035335 ~ 14036324 (-)
LOC122352431 LOC107589561,LOC107583406,LOC107741179,LOC107589922,LOC107579158,LOC107686204,LOC107589583 coding downstream 12532 14030151 ~ 14031155 (-)
LOC122353045 LOC107697402,LOC107743478,LOC107589583,LOC107583407,LOC107579166,LOC107686204,LOC107741179,LOC107743480 coding downstream 16004 14026685 ~ 14027683 (-)
LOC122352430 LOC107743476,LOC107578847,LOC107743445,LOC107589561,LOC107583406,LOC107697382 coding downstream 19854 14022835 ~ 14023833 (-)
LOC122352429 LOC107578824,LOC107743443,LOC107697381,LOC107686201,LOC107743445,LOC107697382 coding downstream 26049 14016637 ~ 14017638 (-)
LOC122353030 LOC107583407,LOC107579158,LOC107686204,LOC107743479,LOC107589583,LOC107741179,LOC107697403 coding upstream 7004 14053056 ~ 14054080 (-)
LOC122353024 or109-1,LOC107579166,LOC107743480,LOC107743446,LOC107741168,LOC107697403,LOC107579158,LOC107743479 coding upstream 10016 14056068 ~ 14057063 (-)
LOC122352435 or109-1,LOC107579166,LOC107743480,LOC107743446,LOC107741168,LOC107697403,LOC107579158,LOC107743479 coding upstream 11037 14057089 ~ 14097135 (-)
LOC122352544 or109-1,LOC107579166,LOC107743480,LOC107743446,LOC107697403,LOC107579158,LOC107743479,LOC107741168 coding upstream 17114 14063166 ~ 14097125 (-)
LOC122352546 or110-1,LOC107579177,LOC107697404,LOC107589615,LOC107686207,LOC107736199 coding upstream 22539 14068591 ~ 14069633 (-)
G77379 NA non-coding downstream 48920 13994422 ~ 13994767 (-)
G77378 NA non-coding downstream 56521 13986935 ~ 13987166 (-)
G77352 NA non-coding downstream 238358 13805089 ~ 13805329 (-)
G77351 NA non-coding downstream 238795 13804483 ~ 13804892 (-)
G77347 NA non-coding downstream 242775 13800013 ~ 13800912 (-)
G77390 NA non-coding upstream 13387 14059439 ~ 14097135 (-)
G77432 LOC107744607,LOC107691628,LOC107693969,LOC107747009 non-coding upstream 98839 14144891 ~ 14145304 (-)
G77456 NA non-coding upstream 245801 14291853 ~ 14292718 (-)
G77472 NA non-coding upstream 315302 14361354 ~ 14361734 (-)
G77476 NA non-coding upstream 320229 14366281 ~ 14368555 (-)
ovca2 ovca2,LOC107697430,LOC107743470,LOC107728834 other downstream 235868 13806104 ~ 13807819 (-)
ypel2a LOC106603438,LOC106931471,LOC106940241,LOC101067200,LOC107659943 other downstream 389274 13643184 ~ 13654413 (-)
sparta spg20,LOC107728829,LOC107589828,LOC107577790,LOC107697408 other downstream 500072 13538156 ~ 13543615 (-)
dclk1a dclk1a,dclk1,LOC107588999,LOC107728871,LOC107577778 other downstream 510623 13492273 ~ 13533064 (-)
mogat2 mogat2,LOC107751377,LOC107691703,LOC107747029,LOC107686211,LOC107589716,LOC107579037 other downstream 1254592 12782353 ~ 12789095 (-)
G77440 dlg1,LOC107738847,LOC107659037 other upstream 156210 14202262 ~ 14204127 (-)
G77441 dlg1l,LOC107653521,LOC107705307,LOC107660320 other upstream 158364 14204416 ~ 14208006 (-)
G77443 NA other upstream 188454 14234506 ~ 14264322 (-)
G77465 hyou1,LOC107691632,LOC107588517,LOC107747001,LOC107693979,LOC107577052 other upstream 293994 14340046 ~ 14343012 (-)
LOC122353009 LOC107562038,LOC107562041 other upstream 421134 14467186 ~ 14481449 (-)

Expression


Co-expression Network