LOC122352450


Basic Information

Item Value
gene id LOC122352450
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 15111412 ~ 15115448 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249857.1
ATGGACAGGAAAATGGAAGCCTTGAGCACCAAAACCAAGACCAGAATAGGGTTTTGGAACATACGGACGATGTACCAAGCAGGAAAACTGGCGCAAGTGACATCAGAGATGCGTCGATACAGTCTGCACATGTTAGGCGTTAGTGAGACGAGATGGACAGGAtacggaaaaaaaacaacatcaacagGAGAGACCATACTCTATTCAGGCAGAGAGGATGACCAACATGAGGAGGGAGTTGCCATCATCTTGAAGAGAGGAACAGAGAAAAACATGATTGAATGGAAACCTGTCAATAGCAGACTGATGAAAGTGAGGATGAAAGGGAGACAAGTAAACATGACAGTCATTCAGTGCTACAGTCCAACAAATGACAGCGAGGATGAGAGGAAAGACCTTTTCTATGAACAGCTGGATGCTGAAGTCAAGTAAACACCAAGGCATGACCTTTTGATTGTCATGGGAGACCTCAATGCAAAGGTTGGCAATGACAATACCAACAACGAGCGAGCAATGGGCAAGCATGGCTGTGGGATAATGAATGAGAACGGAGAAAGGCTCATTGACTTCTGCAATACCAACAACCTAGTTGTGGGAGGCACCTTGTTCCCACACCGTGACATCCATAAGCTGACTTGGTACTCACCAAACGACAGGGACAGGAACCAAATTGACCACCTGCTGATCAACGGAATGTGGAGAAGATCAATTTTGAATGTCCAGGTCAAGCGAGGAGCCGATGTTGCAAGTGATCACCAACTTGTTACAGCTATGTTGCTACTGAAACTGAGAAAAGCAGAGAACAAGACCCATACTACAAGAAGACTTGACATCCAGAAACTTAAAGATCCCCGCATAAGACACAACTTTGTTCTACAGGTCAAGAACAGATTTCAAGCACTGCAGGATCTGGAAACAGAAGTCAGAGTTGACAAGATCGACTTAACATATGAAAACATCAAGAATGTCTATCAGAAGAGTGCAGAAGAGAGTCTTGGATACAGAAccaagaaacagaaaaaggatTGGATCAGACTGAGCACATGGAAAGCCATAGAGAATAGAAGGAAACTCAAGAACCAGCTGATGAACACAAAGTCAGAAAGGCTATTAGAGAGATACAAGCAGCAATACAGAGAGTCCAACAAGGAGGTGAAGAGGAAGTTCAAGACAATTTGGACTTCAGCAACTATACCTGAGGAATGGACCAAAGGTGTGATCATCAAAATTCCAAAGAAGGGCACACTCAGCGACTGCAACAACTGGCGAGGCATCACCCTTTTATCCATCCCTAGCAAGATCCTGGCCAAGGTAATCATCAAAAGGTTATCGAAAGCCGTGGACGCAGAACTGAGAAAGGAACAAGCTGGATTTAGAGCAGGGAGGAGATGCACAGAACAGATTTTCGCTCTGCGTAACATCATAGAACAGAGTGCagaatggtgtctTCAGCTTTATGTAAACTTCATTGACtttgaaaaagcatttgacAGTGTGCACAGAGACAGCTTGTGGCGAATCTTGAGGGCCTATGGAATACCGTATGACATGGTAAAGCTGATCAGGAGTTTCTACAACAACTACAGCTGTTGTGTGGGAGGAAGCGACATCTGGTTTGAGGTAAAAACTGGGGTCCGTCAAGGCTGCGTGATGTCCGCTCTTCTCTTTAACTTGGTGATAGACTGGGTGAtgatttctttatattttgattaa

Function

GO:

id name namespace
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds molecular_function
GO:0004418 hydroxymethylbilane synthase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249857.1 True 1713 mRNA 0.44 3 15111412 15115448

Neighbor

gene id symbol gene type direction distance location
si:ch211-256e16.3 si:ch211-256e16.3,LOC107674048,LOC107552129,LOC107717492,LOC108412900,LOC105898657,LOC108260968,LOC106601741 coding downstream 482338 14620986 ~ 14629074 (-)
LOC122352591 uqcrc2a,LOC107671252,LOC107717493,LOC107552131,LOC107674831 coding downstream 492802 14611801 ~ 14618610 (-)
mosmoa c16orf52.L,c17h16orf52,C20H16orf52,LOC108258941,LOC106518731,LOC102224510,LOC105910214 coding downstream 500189 14591019 ~ 14611223 (-)
sdr42e2 sdr42e2,LOC107726803,LOC107654653,LOC107717482,LOC107552104,LOC106592406 coding downstream 543219 14554997 ~ 14568193 (-)
mfsd13al zgc:171489,mfsd13b,LOC107726812,LOC107573382 coding downstream 565261 14541530 ~ 14546151 (-)
LOC122352451 LOC106676183,LOC106674878 coding upstream 190087 15305535 ~ 15306408 (-)
LOC122352614 LOC107701908,LOC107729578,LOC107556598 coding upstream 192451 15307899 ~ 15315868 (-)
LOC122353145 LOC107701914,LOC108437168,LOC108277112,LOC105013038 coding upstream 201200 15316648 ~ 15341965 (-)
mafga mafga,LOC107556599,LOC107739593,LOC107729585,LOC107701907 coding upstream 232019 15347467 ~ 15362276 (-)
LOC122353069 LOC107565282,LOC107679515,LOC107730972,LOC107694558 coding upstream 567823 15683271 ~ 15684293 (-)
G77669 NA non-coding downstream 7843 15102149 ~ 15103569 (-)
G77514 NA non-coding downstream 613958 14495498 ~ 14497454 (-)
LOC122353010 NA non-coding downstream 646092 14460368 ~ 14465320 (-)
G77480 LOC107575404,LOC107692500,LOC107728752 non-coding downstream 685925 14424513 ~ 14425487 (-)
G77476 NA non-coding downstream 742857 14366281 ~ 14368555 (-)
G77672 NA non-coding upstream 23159 15138607 ~ 15139007 (-)
G77674 NA non-coding upstream 40901 15156349 ~ 15156591 (-)
G77676 NA non-coding upstream 44017 15159465 ~ 15159847 (-)
G77692 NA non-coding upstream 158465 15273913 ~ 15276004 (-)
G77700 NA non-coding upstream 229552 15345000 ~ 15347289 (-)
G77671 NA other downstream 3660 15107137 ~ 15107752 (-)
vwa3a LOC107675622,LOC107552102,LOC107726804,LOC107717475 other downstream 521513 14568330 ~ 14589899 (-)
im:6904045 NA other downstream 626120 14484799 ~ 14485292 (-)
LOC122353009 LOC107562038,LOC107562041 other downstream 629963 14467186 ~ 14481449 (-)
G77465 hyou1,LOC107691632,LOC107588517,LOC107747001,LOC107693979,LOC107577052 other downstream 768400 14340046 ~ 14343012 (-)
LOC122352744 LOC107556605,LOC107709039,LOC107722845,LOC107690595,LOC107555077 other upstream 114521 15229969 ~ 15289672 (-)
G77702 NA other upstream 242237 15357685 ~ 15358232 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other upstream 777196 15892644 ~ 15897232 (-)
LOC122352931 LOC107758671,LOC107689893 other upstream 901223 16016671 ~ 16021774 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other upstream 915079 16030527 ~ 16057307 (-)

Expression


Co-expression Network