mtnr1bb (mtnr1bb,LOC107720651,LOC107693905,LOC103030874,LOC108423763,LOC105890457,LOC108276622,LOC107556861)


Basic Information

Item Value
gene id mtnr1bb
gene name mtnr1bb,LOC107720651,LOC107693905,LOC103030874,LOC108423763,LOC105890457,LOC108276622,LOC107556861
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 9542381 ~ 9560238 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249973.1
gctgctttaaaaaataacttggAGCGAACGTAACGGTCGCCATGGGGCAACGCGGCGCCAAGACTTTCCAGTTCCTCAGCAGTTTTAAGGTGACGGGGAAGCGAGCCGAATACTCGCGCTAGACGAACAACTCAACTACAAGACAGAAAAGAGTTTGAGGTGCTGAAAAGATGTTGAGACAGACTCTACCTCGTATTTCCGGAGAGAGGGATGAGAGGAGAGCGGATCAACCAGAGACGACAGAGATGTACGGCTCAACTGTTCCCAACTTCTGCTGAAATCCAGCTGGAATGACTCGCTTTTtacaaGTCGCGTGAATAACTTTTAGCAAACCAAACCTCAGAGAACAAGCTGGTCCGGGATGCCAGACAATATCGCTTTTCTGACGAACAGCACAGATTTGGGGCACGTCGGTCGCGCGTTGGGTTCGAGCGCGCGCCCCGCCTGGGCGATAGCGGTGCTGGCCAGCGTGCTGATCTTCACCACTGTGGTGGATGTTTTGGGTAACCTGTTAGTCATAATTTCGGTGTTCAGGAATCGGAAACTGAGAAATGCTGGCAACGTGTTTGTTGTCAGTTTGGCCTTCGCTGACTTGGTGGTGGCTTTCTATCCCTACCCGCTGGTCTTGTACGCGATCTTCCACGACGGCTGGTCTCTGGGGGAAACCCAATGTAAAATCAGCGGATTTCTAATGGGCCTGAGTGTGATCGGCTCGGTTTTCAACATCACCGGCATCGCCATCAACCGTTACTGCTACATCTGTCACAGCTTTGACTATGGACGTCTCTACAGCTTCCGTAACACTCTGCTGTTAGTGGCCCTGATCTGGGCGCTCACTGTGCTCGCCATTCTGCCCAACTTCTTTGTGGGTTCGCTGAGTTACGACCCCCGTGTTTACTCCTGCACCTTCACTCAGACTGCCAGCAGCTCCTACactgtggtggtggtggtggttcACTTCCTGGTGCCCATCGCGGTGGTGACCTTCTGCTACCTGAGGATTTGGGTTCTGGTGATACAGGTGAGGAGGAAGGTGAAGAGCGAGGAACGCTCAAGGGTGAGACCCAGCGACCTGCGCAACTTCATCACCATGTTCGTGGTGTTCGTCTTATTTGCAATCTGCTGGGCTCCACTCAATCTAATCGGTCTCGTGGTGGCCATCGACCCAGAGGTCATGGCTCCACGTATTCCAGAGTGGCTCTTTGTGGTCAGCTACTTTATGGCCTATTTCAACAGTTGCCTCAATGCAATCATTTATGGACTCCTCAATCGGAACTTCCGAAAGGAGTACGTGCGAATCATGACGTCGGTGTGGATTCCTCGGAGGTTTGTGACTGAGACCTCCAGGGCAGCCACAGATGGGATGAGGAGCAAACCCTCACCAGCCATTAATAACAACGAGTAACTTTTGTTTTCAGCCGATCACTGTTTAGGAGGAAACGTCATGGATGCATGAAGCTAATTTATATGCGTTGAACTGTGAACACTTGACTTTTTTAATGCTACAAAACCATTATGTACAACTCAGggtgcttattttattttcatcctTGGCTTATTGGAAATTTGTGAGTGCCTAAATTTCTGCAAAACTTGAAACTTTAAGTACGTTTTACTGAATTTTTCAGGTGACTCATCTACAAACAGCGCTAttagtcatttcatttttttctccgTTGAAGATGCAGGTTTATTAAACAGCACAGCACCATGAAAATGACATTCCTGTGAGAACGAAATCATTGGAAAATGATATCGCATTGCTTGTAGCATGTTTCacagcagtttcaaagcaaacagCTGAACATGAATGAACTAATGCTTTATTACATTGTTTGTAACACGGCAATTCAGTAGTCAAGAGTGCTGCACAAATGCtctattgcattttaaattaatgtaccACCTACACTAAACCCTGCCGATTAGTTTTAAGAAGAgcaaatatttgataaaaacacatttggtgAAGCAACCACAACATTTGAGCTTCAAAGCTTTGAGCTATTTTTACAGGACACATACCAAAATACCAGgtgaatgacaaaaaatatgttcaaaCGGAGCAATTTATGTAATGCAAaggttaatgttcattttagcatgTATACATGTGTTTATGCAGTATGTAGAAATGTGGGCAGTTACATGTTTCCAGTGAGCCTtggttgtttatttttgatgttgtgaTCCATTTCAgaacactattattattattaatcgtattaataaatatttatctcaccatttatattgaaaattaaatgaagtaagttttatgatttgtttatgatccatgcatatttattgaagacattttgtacaattttgtGGGTCTGTTGTATATATGTTGTATAAACAAGTATGTATCACATATTTTAGCCATTTTCAATTCAGAACTTCTGCCTTACACTTGAACATTCACatcaaatctgaaaaaaaaatccatatattTAATCAAGGTGCCAAATGTTAATACTTTGACAGTAAGTATCTGATATACCAAATCAGTTTGTCATATCGAACCAAATGAGATTCTGAGAGCAacctaatttaaatgtaatgtcaaCAGAGCTTTAATGAGCGAAGAGCTTCCAGCACAGCAAGATAAAGCAcaagcttcaaaaaaaaaagaaaaaaaaaaaagcacttcatGCGGATTCCGCAAAGACAAATTTAGCTTTTTCAAAGCGAACGGTGACAGCGAGCGGTCAGTCAGTAATCAgtttcaatctgttttcaccTCTTATCTTTCAAACATTAAATGTCATTCATGACTTTGGGGTTATTACTCTGCCAGGAAATGCGCATGACTCTGAAACCATGTATTTTCTTCAA

Function

symbol description
mtnr1bb Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within rhythmic process and signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in caudal tuberal nucleus; dorsal caudal thalamic nucleus; periventricular grey zone; periventricular nucleus; and periventricular nucleus of caudal tuberculum. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human MTNR1B (melatonin receptor 1B).

NR:

description
PREDICTED: melatonin receptor type 1B-B-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0048511 rhythmic process biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008502 melatonin receptor activity molecular_function

KEGG:

id description
K04286 MTNR1B; melatonin receptor type 1B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249973.1 True 2838 mRNA 0.43 3 9542381 9560238

Neighbor

gene id symbol gene type direction distance location
LOC122352476 LOC107693870 coding downstream 65036 9471542 ~ 9477345 (-)
LOC122352477 LOC107693870 coding downstream 72413 9464340 ~ 9469968 (-)
LOC122353226 LOC107720654,LOC107556876,LOC107685010,LOC107555192,LOC107718727 coding downstream 79774 9457441 ~ 9462607 (-)
timm10b timm10b,LOC107556877,LOC107718791 coding downstream 85211 9454716 ~ 9457170 (-)
ilk ilk,LOC107720653,LOC107718724 coding downstream 89322 9437866 ~ 9453059 (-)
kpna7 kpna7,LOC107693907,LOC107720648,LOC107556882,LOC108423764,LOC103041448,LOC108277302 coding upstream 69194 9629432 ~ 9632346 (-)
tmem135 tmem135,LOC107701128,LOC107718730,LOC107720646,LOC107693910 coding upstream 117032 9677270 ~ 9684649 (-)
cct8 cct8,LOC107693911,LOC107701129 coding upstream 125198 9685436 ~ 9690789 (-)
grik1a grik1a,grik1,LOC107693913,LOC107718733,LOC107701130,LOC107555187,LOC107557219 coding upstream 157589 9717827 ~ 9761715 (-)
tiam1a tiam1a,LOC107693916,LOC107718732,LOC107720640,LOC107557220,LOC107701134,LOC107701133 coding upstream 204088 9764326 ~ 9820581 (-)
G76042 NA non-coding downstream 216903 9322599 ~ 9325478 (-)
LOC122352752 NA non-coding downstream 232153 9307968 ~ 9310228 (-)
G75970 NA non-coding downstream 412061 9129886 ~ 9130320 (-)
LOC122352914 NA non-coding downstream 655023 8887004 ~ 8887358 (-)
G75871 NA non-coding downstream 1282114 8230688 ~ 8260267 (-)
G76112 NA non-coding upstream 10193 9570431 ~ 9572283 (-)
G76213 LOC107557212,LOC107693892,LOC107718792 non-coding upstream 100453 9660691 ~ 9663782 (-)
LOC122352922 NA non-coding upstream 135600 9695838 ~ 9697388 (-)
G76225 LOC107693912,LOC107720644,LOC107557217,LOC107555188,LOC107718731,LOC107701131 non-coding upstream 141754 9701992 ~ 9710708 (-)
G76229 NA non-coding upstream 156795 9717033 ~ 9717413 (-)
cd209 NA other downstream 31951 9489330 ~ 9510430 (-)
G76068 NA other downstream 112581 9427962 ~ 9429800 (-)
G75913 LOC107688158,LOC107713356,LOC105014858,LOC103473696,LOC107686448 other downstream 986293 8543097 ~ 8556088 (-)
smtna smtna,LOC107686451,LOC107569392,LOC107688657,LOC107713360,LOC107744109,LOC107579337 other downstream 1014934 8519666 ~ 8527447 (-)
unc13bb unc13bb,unc13b,LOC107686461,LOC107713368,LOC107688005 other downstream 1145982 8318889 ~ 8396399 (-)
LOC122353179 LOC107693906,LOC107720543,LOC107555189,LOC107701125,LOC107718772 other upstream 12134 9572372 ~ 9625405 (-)
fgf13b fgf13,fgf13b,LOC107555168,LOC107718748,LOC107720625,LOC107701151,LOC107548853,LOC107693932,LOC108444526 other upstream 707116 10267354 ~ 10283665 (-)
G76438 NA other upstream 819858 10380096 ~ 10383309 (-)
G76498 NA other upstream 917821 10478059 ~ 10480189 (-)
rps6kb1a rps6kb1a,LOC107747022,LOC107548877,LOC107744622,LOC107699259,LOC107693887 other upstream 1412643 10972881 ~ 10983738 (-)

Expression


Co-expression Network