LOC122352562


Basic Information

Item Value
gene id LOC122352562
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 16246653 ~ 16249749 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251885.1
caaagaaAGTTTACAAGACGTCATCTTCACCTCTCTTCTGTCAGACACTGAGGTCCAATGCAGTCATAGAATGAGAAGAGCCTGCTTTATGAGAGTCTGTCTGAGAGTCATATAATTGacttttcattgaggccctaaagaatcatatcaacaATTAGAAAATGGGCATCCAATGACCTCTTTAATAATTTTTCAGTCAGTGTCTGCTCAGCTGATGGAGCTCTTCCGTGATCGTTTGGGTTCATCGATAAGCTGCGTTGCTGCGAAGGTCAAGCGCAAATCTCCTTCTGCTGCCATCTTTCTGAACGGGAAAACCTCTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251885.1 True 322 lncRNA 0.43 3 16246653 16249749

Neighbor

gene id symbol gene type direction distance location
dusp11 dusp11,LOC107602062,LOC107758654,LOC107689237,LOC107558079,LOC107565330 coding downstream 2620 16240176 ~ 16244033 (-)
stambpa stambpa,LOC107758608,LOC107658597,LOC107558102,LOC107746197,LOC107689905,LOC107602045 coding downstream 7584 16232746 ~ 16239069 (-)
ess2 dgcr14,LOC107758656,LOC107746196 coding downstream 14073 16227319 ~ 16232580 (-)
dgcr2 dgcr2,LOC107689205,LOC107602057,LOC107746195,LOC107558114,LOC107658593,LOC107758577 coding downstream 19478 16217026 ~ 16227175 (-)
car15 car15,LOC107602060,LOC107758609,LOC107689182,LOC107558080 coding downstream 32968 16209748 ~ 16213685 (-)
tcf7l1a tcf7l1a,LOC107602061,LOC107558109,LOC107658535,LOC105912913 coding upstream 6530 16256279 ~ 16283760 (-)
march5l march5l,LOC107718703,LOC107689266,LOC107602066,LOC107658605,LOC107588990 coding upstream 92280 16342029 ~ 16345823 (-)
stc1l stc1l,LOC107689312,LOC107718700,LOC107588987,LOC107658607,LOC107758648,LOC107602071 coding upstream 149104 16398853 ~ 16401534 (-)
LOC122352454 wdr45,LOC107658559,LOC107689948 coding upstream 188571 16438320 ~ 16442017 (-)
LOC122352611 NA non-coding downstream 53113 16189534 ~ 16193540 (-)
G77936 NA non-coding downstream 66758 16178600 ~ 16179895 (-)
trnag-gcc_66 NA non-coding downstream 127631 16118952 ~ 16119022 (-)
trnag-gcc_65 NA non-coding downstream 127797 16118786 ~ 16118856 (-)
LOC122353141 NA non-coding downstream 145309 16098995 ~ 16101344 (-)
G77979 NA non-coding upstream 101648 16351397 ~ 16353048 (-)
G77980 NA non-coding upstream 124471 16374220 ~ 16379551 (-)
G78010 NA non-coding upstream 144465 16394214 ~ 16395645 (-)
LOC122353043 NA non-coding upstream 246228 16495977 ~ 16497273 (-)
morn3 orai1b,morn3,LOC107746203,LOC107602056,LOC107689140,LOC107758661,LOC108425168,LOC107758660,LOC107683200 other downstream 69542 16172478 ~ 16177111 (-)
cabp1b LOC107583405,LOC107746207,LOC107658587,LOC107758669,LOC107689072,LOC108440152,LOC103029522,LOC107373232,LOC102297829,LOC108232745,LOC103473718,LOC105890914,LOC107558082,LOC102200114 other downstream 189346 16030527 ~ 16057307 (-)
LOC122352931 LOC107758671,LOC107689893 other downstream 224879 16016671 ~ 16021774 (-)
npffr1l1 npffr1l1,LOC107658551,LOC105907118 other downstream 349421 15892644 ~ 15897232 (-)
G77702 NA other downstream 888421 15357685 ~ 15358232 (-)
LOC122352830 LOC107689301,LOC107718705,LOC107602072,LOC107658608,LOC107658557,LOC107589035,LOC105888796,LOC106563065 other upstream 166159 16415908 ~ 16490354 (-)
zgc:100918 zgc:100918,LOC107588983,LOC107689338,LOC107602073,LOC105902761,LOC105015198,LOC106563067,LOC103037223 other upstream 182778 16432527 ~ 16437594 (-)

Expression


Co-expression Network