G78038


Basic Information

Item Value
gene id G78038
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 160750 ~ 303218 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115455
ATAAGATGATatatgttttgcctttttttctttgtgtttgttagGAAATAAGTAATATTCATCAATGAGACTGAATCTTATTCTTGCAAGCCAAGACCAGAAGACCATAATATTCACATTCAGTCTCATTTCAAgtcaaaatgtatacattaattGCTTTGAAGTGATTTTTTCTACATCTCCACAGATATCTTATACGTAACCTCCTTTAATGTGCAGCAAAACTCAAGCGATTTCAAGCCATGactttaacactttttattattgcacaCAAATCCATTGCATTACTGTGATAAGGCAGTACAATATATACAGCTTATATACAGTGGCTTTCAGAAAGTATTCACACCccgtttgttttaataatgaaatatttttttcttccttcaaTCAAATCACCCCTTCtcctctcaaaagaaaaaaccaaaaacaattgCAATAACCTTCTTGGCGAAGAGAAATAAAAAGGGACTCGATACCTTCTGAAGGCACTATATATTCATAGTGTGTACAGCGTTTCAACCACGAAGACATTCAGAAACTACCAGCCACAGCGTGAAGCCATCTACACCTTCATCCTGTTTCACACAGAAGAATCACCTTACAGTATGGCAAGCAGATATGAGCGCACAGACAGTAAATATTTGAGAACTGTAACAAAGAAATCACCAAAGAATCGTCTAAATCGAGGAGCTCGTATGGCTATCTTCACACGGCGTTTCTGCAGGACGGCAGAGAGGTGATTTTTGGCCTTCGTCCCGCTCGCTCTTCCTGCCCTCGCTTTCATGCACACCATATAGTGTCTTTCACATcaagtacaaaaatatatttctattgaCAAAAGCAAACGTCAGTAAATATTAGTTATCTGCAGACAGATCCGTGGGGTGTACAAAGTTACTAGCGGTTCAGTTGAGTTACTCGTAGAAGCGTTTAACGTCACATCACACATGGACTCGATGTCTTACAATATCTAAACACATAATGATGTTTAAGATGCGTTTCTGCTTTTCTATCgaattaaaatcaaatagtCGAAGACAGAAGAGCCTCGCAAACATTTGAAAAAGGACTGAAAAAATACTCTCGTAAGCAAGACTAGTTCAAGTTCAGGCGGTTCAGTTGAGTTACTC
>TU115456
cacacacacacacacacacacacacacacacacacacacacacacacacgcacacacacacacacacacacacacacacacgcacacacacacacacaaacacacacacacacaaaccttaCTCATCTTTCCACAAATCAACAGTAAGCGTAAAAACAGAGATGTGTTTTTTGCAGACACGAATCATAGTAAATGCTGGCGTGAGCGTCGACGCACATCACAGAGACATAAAGACAAGGACCCTGCcgttctgtcatcgtttactcacgcTCGAGACTGTTTAGTTAGGCATATTCTTCAAAGTATCTTCTTTCCAGATATCTTCTAATAATTTActcatgagggtgagcaaatgatgaatGATGAACTTTTGGTatcactttctatgaagcctctatttataataatactgtaatgaaAGCTAGTCGCAGAGTTCTTTATCAACAGCTGTCTAAAGTgtaccatcaaaataataatattatatataatttaaaaaaagttcaaatcaaATATGTCATACATTCATCTGATCTGATATCAGATTTGATGGCTATTTGAGAGAAAACAGGATCGTTATTAAGTGGCATTTGTCCActttaagtaaagtaacaaGTAAAATAGAAAGGAATGAGActcataattaatgcattataactattagaaatataatccattgtaacAGAAGTGGATTAATCATGTTCATTGTGTTATAAATTATCATGCTCTTAAAATCATCAACCactaataagtaaatattataacacattaaaactgttcttatgaatattcattagATGATACAAcataagttatttataatgcattatgcattcattataatgcctaaTACccttattatgtttaataagtACATGATTAATAGAAAGTGTTACTGAACCTTCCACTAATAGCAAAGAACTAAATGAACTCACAGTACACGAGCAAATCAACTCTAACCAAGAACTACAGAAAGAAGGGAATATTACAACTAGTTATCAAATTAAGAGTCTTTAGAAAACTATTTTAGGGGTTATATGATGTTGctgaaaagaacattattttgtgtatctGGTGTAATTCAATctgtttatgcagtttaaggatccaaaaacacattattttccacatactgtacattactgtttctcctctaagctccgcctcctgatttgtacaaagctcatcgttctgaAAAAGCGAGGtatgctctgattggtcagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115455 False 1133 lncRNA 0.37 2 160750 303218
TU115456 True 1221 lncRNA 0.34 2 162462 163750

Neighbor

gene id symbol gene type direction distance location
LOC122354020 iars,LOC107697556 coding upstream 44249 69645 ~ 116501 (+)
LOC122354142 zgc:172352,LOC107701181,LOC107575329,LOC107747702,LOC107684012 coding downstream 48737 351955 ~ 365169 (+)
si:ch211-159e12.5 NA coding downstream 93973 397191 ~ 403408 (+)
slc11a2 slc11a2,LOC107669929,LOC107561796,LOC107747835,LOC107677945 coding downstream 122262 425480 ~ 438326 (+)
npffl npffl,LOC107747841,LOC107669931,LOC107738884,LOC107677943 coding downstream 137002 440220 ~ 442079 (+)
alas1 alas1 coding downstream 139735 442953 ~ 448514 (+)
G78072 NA non-coding downstream 35618 338836 ~ 339676 (+)
G78061 NA non-coding downstream 47401 350619 ~ 350944 (+)
LOC122354311 NA non-coding downstream 64585 367803 ~ 373639 (+)
G78047 NA non-coding downstream 99227 402445 ~ 405473 (+)
LOC122353670 NA non-coding downstream 100234 403452 ~ 404970 (+)
LOC122353551 NA other upstream 95602 63006 ~ 65148 (+)
G78055 LOC107569407,LOC107569398,LOC107688685,LOC107571108 other downstream 29851 333069 ~ 334396 (+)
LOC122354326 LOC107747702,LOC107684012,LOC107574232,LOC107701181,LOC107737133 other downstream 45299 348517 ~ 350442 (+)
G78083 NA other downstream 106115 409333 ~ 410684 (+)
G78084 NA other downstream 108821 412039 ~ 412753 (+)
iars1 iars,LOC107697556 other downstream 283197 586415 ~ 599371 (+)

Expression


Co-expression Network