G78045


Basic Information

Item Value
gene id G78045
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 184597 ~ 329022 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115464
AAGCAAACTTACTGGCTCCCACGGTGAAGCTGCTCCAGCCCTGAAACACAGACGAGGTTCAGGACGAGTGAGGGACAGAGCGTGATTGAATGAAAGCTGCCGCGGTGTTACCGAGTAGATGGAGGACATGGCGTTGTTCACAAAGTCCTCATCTTTCTTGGGCGGGTTGGGAGTGTTTCCAAACCCCACATATCTATTCTCCTGCGCCCCGGTCGCTCCGGCGCTGAAACACAGAACCCTTTTAAAGCACGTCTTCTCTTAGTGTCCTGAACGTGACACACGGGTGTCTTGTCAAGATTCAGGGTCAGTTTCCATGCGATGCGTATATTAGCGTTTAATAGAAACGAGTGAAGCACAAGCTCACTTCTGGTAGGAGTTGACGTCGTCGCTCAGCCAGTCCTCGAAGGCCTTGTCCGAGGAGTGCGTGTGGTTCTGACCCGCAGCGGCACTGGACCTGAAACGACAGACGCTCTGTTAGCCGTCAGCACCGGCGCCGCTCACAGAGAGTCCGTCTCGGGGCAGTACCGGTGCGCAGCACTCAGGCCGCTCTTGGCCTGCGGAGGAGTCCAGTTCCTGGCGGGAGAGTTCTCCATCGTCCACTCCTTCCCTTCGGCCTGAGTCACCACCTTCAGCacggatacacacacacttcagacaCTCAACAGACAGGTTGTTGAGAAGACCTCTAGctttctgtttctttatgtGATATGGCAATAGCTCGTATAAGATAtataatggtttaaaatgaagaaagtgTTGAAGGGACCTTGTCTCTGAAGAGCGCAGCGGCTTTGCTGTTGTATTTCTCCTGCAGGCTCCAGCTGGGGTCGTAGTCGTCCTGCAGCTCCAGGAACATACGGAACTTCCTGTTTCCTCCGACCTTCATCTTCTCCAGCTCCAGGTCCTTCCACTTGTCCATCGACACAGACCGCACAAAGCTACGAGGAGATAAACAGAGTTTATGATCATCAGACACACTTCAGATTCCTCTAAATCAGAACGGAGCTGACCTGAGATGGACCCCGAGGCCCCTGTGTTTGCCCGAACACTCCAGACAGATCCAGATCCCGTACGTCACACTGACCCACTGAGGATTAAACGCTCCGCACTCGAAgcacacctgacacacacacacacacacacacacacacgctgaacACACACCtcctgagacagagagagagagagagagagagagagagagagagactcacaTTGTTCTCGTCGTCGGACCGGACCTCCTTCAGCACTCGTCTGGTTCTGGGACTCGCCATCGCTCCTGAAACACACTCTTATGATCTTTCAGGTGCACACGGTTAAACAAGTCTCTCAATAAAGCCTGCATTGGTTTGATccaatattattcaaatctttTTCAACACAGTTGagtgaaaaagacatttataatgtcacaaaagattACCGTTTTaggtaaatgcatttttaatgaaagatatctaaacagaaaacattattttaaataactaacctattttaacattttactgtactttAGATTAAAAAgattggtgagcagaagagacttctttacaaaaaaaaaattaaaaatcttgcCGTTGAAAAACTGTTGCCTGTTTATGACTGTAGAAGTGAAAGTATTAGTCTGAGAGTAATGTTAAGATGTGTCTTCAAATCTTGATTGTTTACAATAACTtctatctattttaaaaaaactaatcAAATCACAGCATCTGTGAAGAGTTTGAGAAACAAAAACTAAGAAAACTCAAGCTGGACATCACTCCTGAACAGAGTTTTTTATAATACCGCGAAATTCTCTGTcatgctataataataataataataataataatatcaaattaTTCAAAAAGTGTGCTACATGTAAACTAATCTGCCATTTTGAGCACAAAATGTGTTTCAGAGGTCCTCTCCCTGATAGAATGAGATCAGTCTGTAGATGAAATAAGGCTCAGATCTCTGATGTGTTCTTAATAACTCGATCAGATTCGTGTGATATGATCGTGATGAAGATCCGACGAGTCTGTCTTTACCTGCTGGGTTTGTCTTCGgctctgaggaggaggaggaggatgatgatgatgatggtctCTCTTCACGCGGATCTCATTCACTCATCAACAGTCACTTCAAACGATTTCCACCGAGACCAAGCGTTTCGACCACCGGCTGATCTCTACCGTTTAACGCGTTGAAACACCGGCCTGACCATCGATCGGTGCTGCGCTGGCAGACAGCGGCATTCTGGGACATCCGCGCTGCGTCACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115464 True 2271 lncRNA 0.46 2 184597 329022

Neighbor

gene id symbol gene type direction distance location
LOC122354020 iars,LOC107697556 coding upstream 68096 69645 ~ 116501 (+)
LOC122354142 zgc:172352,LOC107701181,LOC107575329,LOC107747702,LOC107684012 coding downstream 22933 351955 ~ 365169 (+)
si:ch211-159e12.5 NA coding downstream 68169 397191 ~ 403408 (+)
slc11a2 slc11a2,LOC107669929,LOC107561796,LOC107747835,LOC107677945 coding downstream 96458 425480 ~ 438326 (+)
npffl npffl,LOC107747841,LOC107669931,LOC107738884,LOC107677943 coding downstream 111198 440220 ~ 442079 (+)
alas1 alas1 coding downstream 113931 442953 ~ 448514 (+)
G78052 NA non-coding upstream 10124 171385 ~ 174473 (+)
G78072 NA non-coding downstream 9814 338836 ~ 339676 (+)
G78061 NA non-coding downstream 21597 350619 ~ 350944 (+)
LOC122354311 NA non-coding downstream 38781 367803 ~ 373639 (+)
G78047 NA non-coding downstream 73423 402445 ~ 405473 (+)
LOC122353670 NA non-coding downstream 74430 403452 ~ 404970 (+)
LOC122353551 NA other upstream 119449 63006 ~ 65148 (+)
G78055 LOC107569407,LOC107569398,LOC107688685,LOC107571108 other downstream 4047 333069 ~ 334396 (+)
LOC122354326 LOC107747702,LOC107684012,LOC107574232,LOC107701181,LOC107737133 other downstream 19495 348517 ~ 350442 (+)
G78083 NA other downstream 80311 409333 ~ 410684 (+)
G78084 NA other downstream 83017 412039 ~ 412753 (+)
iars1 iars,LOC107697556 other downstream 257393 586415 ~ 599371 (+)

Expression


Co-expression Network