G78072


Basic Information

Item Value
gene id G78072
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 338836 ~ 339676 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU115514
cacacacacacacacacacacacacacacacacacacactcacacacactcacacacacactcacacacacacacacactcacactcacagacacactccacagacacactccacacacacacacactcacacacacacacacacacacactcacacaccacagacacactcacagacacactcacagacacactcacacacacactcacacacacacacacacacacacacacacacacactcacactcacagacacactcacagacacactcacagacacactcacagacacacacacacacacacacacacacacaggaatgGTTGAGTATTCAGTCCTTTAGGATGTGGTGGAAAAACACTCTTCACGGTCCAGGCTGCATCTGTGACCTCAAACCGCAGTGAATTATGGGAATAAAACGATCATTCGGCAAAGAACGGATGCTCCAGAGCATTCAGAGCAGAGATTCGTTTCAACGGATCAAACGTCAGCATTTCCTGTTCAGACAGAGGAAGAAGTCAACAAAAAGtccatttagtttagtttatctGTTTAGTTACTGTGTGCAGGAACCAGTCAAAGCACTCCATTCAAGACTAGTTTTTAAACTAAGTTTAAGTGTGagtttcttttctgtttttggtgTACTGATGAAACTAACGTGAGGTGTGAGGGTCTGTTCTTCACGCTCTCTGTACGTGGACTGATTAGCATTAACCAGTTTTACTACTAAAACAGATTACAGTAGATAATCTTAACAGCCATCTGGCTcttgacttatttttttatttc

Function

GO: NA

KEGG:

id description
ko04142 Lysosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU115514 True 795 lncRNA 0.44 2 338836 339676

Neighbor

gene id symbol gene type direction distance location
LOC122353958 sarnp,LOC107683632,LOC107696044 coding upstream 57274 280680 ~ 281562 (+)
LOC122353953 LOC107569407,LOC107688685,LOC107569398,LOC107688486 coding upstream 145979 190906 ~ 192857 (+)
LOC122354020 iars,LOC107697556 coding upstream 222335 69645 ~ 116501 (+)
LOC122354142 zgc:172352,LOC107701181,LOC107575329,LOC107747702,LOC107684012 coding downstream 12279 351955 ~ 365169 (+)
si:ch211-159e12.5 NA coding downstream 57515 397191 ~ 403408 (+)
slc11a2 slc11a2,LOC107669929,LOC107561796,LOC107747835,LOC107677945 coding downstream 85804 425480 ~ 438326 (+)
npffl npffl,LOC107747841,LOC107669931,LOC107738884,LOC107677943 coding downstream 100544 440220 ~ 442079 (+)
alas1 alas1 coding downstream 103277 442953 ~ 448514 (+)
G78045 NA non-coding upstream 9814 184597 ~ 329022 (+)
G78043 NA non-coding upstream 16852 179562 ~ 321984 (+)
G78038 NA non-coding upstream 35618 160750 ~ 303218 (+)
G78061 NA non-coding downstream 10943 350619 ~ 350944 (+)
LOC122354311 NA non-coding downstream 28127 367803 ~ 373639 (+)
G78047 NA non-coding downstream 62769 402445 ~ 405473 (+)
LOC122353670 NA non-coding downstream 63776 403452 ~ 404970 (+)
G78081 LOC107747831,LOC107561793,LOC107684010 non-coding downstream 66059 405735 ~ 408404 (+)
G78055 LOC107569407,LOC107569398,LOC107688685,LOC107571108 other upstream 4440 333069 ~ 334396 (+)
LOC122353551 NA other upstream 273688 63006 ~ 65148 (+)
LOC122354326 LOC107747702,LOC107684012,LOC107574232,LOC107701181,LOC107737133 other downstream 8841 348517 ~ 350442 (+)
G78083 NA other downstream 69657 409333 ~ 410684 (+)
G78084 NA other downstream 72363 412039 ~ 412753 (+)
iars1 iars,LOC107697556 other downstream 246739 586415 ~ 599371 (+)
atp2b2 atp2b2,LOC107561799,LOC107570616,LOC107746712,LOC102776443,LOC107697566 other downstream 263462 603138 ~ 709490 (+)

Expression


Co-expression Network