G79361


Basic Information

Item Value
gene id G79361
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 5239514 ~ 5240712 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU117432
ggcTGGTCATCTGAGCTTATTCACATCAGTATGTGAGtgaaaaaagctttatttctgGGTAATTTCAATATTCACTCTAAAACTGAAGTGAATGATCTTAAATGTGTtctaatttaatgaaaacatgtaaaaaagtGAAAGTCGGAATCCCAAGATATAATGTCACAATTGCAAGTtctaaagtcagaattgtgaaatataaacttgcaattctgagaacatATCAATCTTTTTTCACTCAAAATTGGACTCTGTAACTtgcaattgcaactttatatcacACAGTCCAAGATATAAATgaacaattctgacttttttttccatgtaattGCAACTCTCTCTCACAATgctgactttataacttgccAGTTTTTTAGGCAGGTCATTTttaatcaggaaaaaaaaaaaaaaaaaaattaaaaaataataaacatttttttgggaaGTTGTTATACAACTTCTCTGTGAGCAAAGTTGgcacatttttgtcaaattcaatgtcattaaacagaattttcaggaaaaagaaaaggctCTCTGGGTTAAAATGACTAGAAACACAATGAGTTAAGAAAGTTATtgttataaagttataaagttATTTGCATTTACTCATCACATCAAGATTTGTCCGTTATCAATGAATGTACAGAATTCCACAAGCTAATGagtagaaaatgttatttagttTATGAGACACAATGTAAGTTGAATGTTTTGATCATATGACCATTGGGTTTCAACTGTATGAGGTTTTTACTGCAGATTTTGACTGTTCTGATCTGGACTAAAGCTACGTCAAGCTGACAACACAATAACTTTGCACAATTGCTTTTGAAATGAATATGGAATTTCTAATGAAGCATAAAACACCAGTTCATTAGGCCCCCATCATTATACCAGCATCAGCAAGTTTAACTGAAAGCCTACAAAGGATTTTCAGTTTCTCACTTTAGCAACATCTGTGGCCTCAATCATTCTCATATCActgtttattatctttattttgatatttacttTGACATCTGAAACGATTcgtacacatacattatgttgtctttgttaattgtttttttttctgcaaatgaaTTTTTCTGGTGTGTGAGCTACTGTTGTACCTttcaaaataatgaatgcaATTGGTGCTGgggtcaaaaaaaagaaataaaataaaggtaattgAATAATTTGCTTGGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117432 True 1199 lncRNA 0.31 1 5239514 5240712

Neighbor

gene id symbol gene type direction distance location
aldh4a1 aldh4a1,LOC106582961 coding downstream 10184 5218233 ~ 5229330 (-)
LOC122353703 LOC107712987,LOC107746004,LOC107701987,LOC107592853,LOC107735212,LOC107706548,LOC107557400 coding downstream 27356 5210782 ~ 5212158 (-)
LOC122354090 LOC107658671,LOC107718693,LOC107557899 coding downstream 730334 4497560 ~ 4509180 (-)
ghrh LOC107718698,LOC107557909,LOC107745328,LOC107658696,LOC107560430,LOC107669017 coding downstream 752317 4484135 ~ 4487197 (-)
pank4 pank4,LOC107742899,LOC107557906,LOC107745330 coding downstream 785078 4436874 ~ 4454436 (-)
iffo2b iffo2,LOC107557407 coding upstream 2895 5243607 ~ 5273639 (-)
akr7a3 akr7a3,akr7a2,LOC107712983,LOC107657980,LOC107582419,LOC107557399 coding upstream 38755 5279467 ~ 5284046 (-)
kcnab2a kcnab2a,LOC107592856,LOC107712982,LOC107657983,LOC107582417,LOC108431628,LOC108255041 coding upstream 112947 5353659 ~ 5382528 (-)
pax7a pax7a,pax7,LOC107582416 coding upstream 252039 5492751 ~ 5547015 (-)
errfi1a errfi1,LOC107701998,LOC107756659,LOC107592857,LOC107736087,LOC107654423,LOC107579142 coding upstream 395417 5636129 ~ 5644021 (-)
LOC122354468 NA non-coding downstream 44188 5194012 ~ 5195326 (-)
G79329 LOC107660256,LOC107566921 non-coding downstream 57816 5181296 ~ 5181698 (-)
G79327 LOC107393734 non-coding downstream 66995 5171775 ~ 5172519 (-)
LOC122353716 NA non-coding downstream 75050 5162029 ~ 5164464 (-)
G79256 NA non-coding downstream 770233 4464787 ~ 4469281 (-)
G79454 NA non-coding upstream 468282 5708994 ~ 5710707 (-)
G79472 fam213b,LOC107756615,LOC107702003,LOC107592888,LOC107582414,LOC107712975,LOC107654427 non-coding upstream 486732 5727444 ~ 5729058 (-)
G79490 LOC107592861,LOC107702006,LOC107756656,LOC107582474,LOC107712957,LOC107654430 non-coding upstream 552258 5792970 ~ 5794230 (-)
G79530 NA non-coding upstream 617253 5857965 ~ 5858242 (-)
LOC122353630 NA non-coding upstream 694192 5934904 ~ 5936532 (-)
si:dkey-197i20.6 si:dkey-197i20.6,LOC107745350,LOC107710445,LOC107658773,LOC107669007,LOC107592569 other downstream 1273723 3961981 ~ 3965791 (-)
G79085 zgc:113223,LOC107745344,LOC107698001,LOC107556176 other downstream 1324879 3913248 ~ 3914635 (-)
LOC122354343 cpne5b,LOC107680428,LOC107714485,LOC107555996,LOC107699334,LOC107751002,LOC108436414 other downstream 1404591 3813505 ~ 3834923 (-)
G79003 NA other downstream 1698459 3540001 ~ 3541055 (-)
cdab cda,LOC107714500,LOC107751011,LOC107572847,LOC107680435,LOC108436250,LOC105898129 other downstream 1983302 3253863 ~ 3256212 (-)
mmel1 mmel1,LOC107712974,LOC107756657,LOC107654428,LOC107702001,LOC107592889 other upstream 498304 5739016 ~ 5765140 (-)
G79565 NA other upstream 855421 6096133 ~ 6096480 (-)
vamp3 vamp3 other upstream 1572913 6813625 ~ 6847790 (-)
phf13 LOC107756642,LOC107751178,LOC107582403 other upstream 1890866 7131578 ~ 7141236 (-)
LOC122354641 svbp other upstream 1912753 7153465 ~ 7155275 (-)

Expression


Co-expression Network