G81736


Basic Information

Item Value
gene id G81736
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 14490705 ~ 14493029 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU120979
TTTATTTACAAGAACCATTAGCACATGCAAAACCTTTCGGCCTCGTGGAACGGCAAACCCATCTCCGACTGGAAGAGAAATCCGTCAGGGTCCATTAACAGGCGGTCATGTAAATCCCTGCCGTCTGACTCGGGTGGACTCACCTGGTGCGTAGCTCACGCCCCACCACCACGTCCAGGGCATGAAGGAATGGTGGAAGATGTGCAGGAAGGTGATCTGACTGTGTTTCTTACGCAGCACAAAAAACCGTATCCATAAGCTCAATGAACTTCGAAAACAGAAACAACCAGGCAACTCGTGTCATCTGTGGGGGAAAAGAGACATCTTTAATACACTGATTATTTGTGCACAGGTAAGTATATCACAGGAAACGGAAAGCAAGTCTTACTCTGAGTCCTTGAGGGCTGTTTGAATAATCGCACGGGTCGCATCTCCACGTGTATCCCGTCGCCCAACCCGACATCAAGAACTACAACGCGAAACAATTAACATACAAATTTAAACTCAGGAACTGGTTTTCGAGGAGCAACTCAAAACCAGAATGGCATCTccataatgaataaaaacacacgcCTCGCTCTGAGTCAAACACATTAGCCCGAGCGCACCGCCTCGCAGAAGCCATCTCCTGATTCTCACCTCGTATACGATATATGCAGACAGGCCAACCAAGGACAGGTTGTAGACGATCATAGCTTCTTTCAGTTGGAAGGGTTTGCGGTTGGCCATAAACCTGGGGCCAGCGTACAGTGCGAAGAAAAGATAAGCAAGCAGGACAGCGGTCATGTTGACTGGACTCTCCATTAGCAGGTAACCCTTCACCCGCGGGTCTTTCCTGATAAGAGGCTGTCATAGACCTCCAGTACTCTGTCTTTCACCGTCTCCAGCATTTTTACTGACGTCAGCTTCACGTTCAGCTACACAAAAAGCACCTGTGAGGGCAGAAACAGAGATGTCGTGAGCGCAGAGCGTAACGTCACGTGGAGCAAAACGCGCATAAATGCAGTCGGTGTATCTCAACGCTGGGGTTTCCACCAGCAGCTGGCTAACGGAGTCAAacgctTGTAAGAGATGTATCAGGTGACATCAACAGCTGATCCAGTGAAAATGAAAGACCTTGAACTTCACGCTGGAAACATGTGATGTTAATCTCAAGTCCGTTTAAAATTCTTTAGCCAGATGCTCTCTTAACAATGAACCCGCTTACTCTACTACCACTAAAGagagtttttctgtttttaccaAATTCAGTTTCTTTATCGTTTTCCGTCTCCCTCTTTCCCTCCTCCATGTGTTCTTCCCATCTTGGCTGATATGGTGTGATGTTGGAGGTGTGGCTGCAGAAGGGAGTGGAACGGCCCCAGTGAGGTAATGCCTGCCTCCCATTAACCTTCATGAAACGCTCGGTCGCCTACACCGAATATATCAGCGCCTCGGCTTTGCCGCTGGGTTTATACAGCGGACTGCACGGATGGAGGAAGCGGAATCGGCTCTTATCACAGATCTGTGTCCCGACTGAACTCTGTGTAAACACAGGAGGGGTTCAGGTGTGTCGCGCACTTCGGTTTGAAGTCTTTCttttcagcaaaacaaagaacTTCCTAAAGTAAGCTGTGAGGAAAGGACTGTACaatgaacagcaaaaaaaaaaaaacgctacaGCGAACTGCCTGCATCCACAGCTTAGTCACTAACCGAATGTTAAAGATTAACAAATGCAATGAAaagagatgtaaaaaaaaaaatcaccttcgCTCACTAAATAAAT

Function

GO:

id name namespace
GO:0019219 regulation of nucleobase-containing compound metabolic process biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0009889 regulation of biosynthetic process biological_process
GO:0031326 regulation of cellular biosynthetic process biological_process
GO:0051252 regulation of RNA metabolic process biological_process
GO:1903506 regulation of nucleic acid-templated transcription biological_process
GO:0010468 regulation of gene expression biological_process
GO:2001141 regulation of RNA biosynthetic process biological_process
GO:0010556 regulation of macromolecule biosynthetic process biological_process
GO:0051090 regulation of DNA-binding transcription factor activity biological_process
GO:2000112 regulation of cellular macromolecule biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120979 True 1768 lncRNA 0.47 4 14490705 14493029

Neighbor

gene id symbol gene type direction distance location
btf3l4 bt3l4,btf3l4,LOC103026176,LOC105028135,LOC107655993,LOC107562065 coding upstream 18608 14468907 ~ 14472097 (+)
LOC122353764 LOC107723054 coding upstream 50895 14417383 ~ 14439810 (+)
zgpat zgpat coding upstream 75402 14410061 ~ 14415303 (+)
rtel1 rtel1,LOC107723052,LOC107753877,LOC107665833,LOC107562060 coding upstream 81466 14393900 ~ 14409239 (+)
rbb4l rbb4l,rbbp7,LOC107753839,LOC107562083,LOC107656110,LOC108438657,LOC105893332,LOC103023991,LOC107730765 coding upstream 109172 14373890 ~ 14381533 (+)
mob3c mob3c,LOC107576341,LOC107572948,LOC107753835,LOC107723061,LOC107656107,LOC108270829 coding downstream 20666 14513695 ~ 14519419 (+)
mknk1 mknk1,LOC107753831,LOC107723060,LOC107655971,LOC107602795 coding downstream 26881 14519910 ~ 14527527 (+)
LOC122354141 NA coding downstream 34639 14527668 ~ 14532247 (+)
atp5f1b atp5b,LOC102199207,LOC100693141 coding downstream 39711 14532740 ~ 14536364 (+)
abcb11b abcb11,abcb11b,LOC107692229,LOC107602798,LOC108438644,LOC105911976,LOC108270741 coding downstream 46295 14539324 ~ 14555353 (+)
G81752 NA non-coding upstream 5442 14485025 ~ 14485263 (+)
G81750 NA non-coding upstream 38959 14451339 ~ 14451746 (+)
G81749 NA non-coding upstream 40471 14450030 ~ 14450234 (+)
G81732 NA non-coding upstream 118335 14371306 ~ 14372370 (+)
G81726 comp,LOC107733073,LOC107665851,LOC107680551,LOC107747026 non-coding upstream 180858 14267605 ~ 14309847 (+)
G81753 NA non-coding downstream 207 14493236 ~ 14497040 (+)
G81762 NA non-coding downstream 43584 14536613 ~ 14618947 (+)
G81763 NA non-coding downstream 44298 14537327 ~ 14537789 (+)
G81782 NA non-coding downstream 141079 14634108 ~ 14637259 (+)
G82017 NA non-coding downstream 613882 15106911 ~ 15108103 (+)
zfyve9b zfyve9b,LOC107753830,LOC107656105,LOC107562066,LOC107723065,LOC107665831 other upstream 1896 14472566 ~ 14488809 (+)
ptgfr ptgfr,LOC107753832,LOC107562064,LOC107655972,LOC107665835 other upstream 22102 14465892 ~ 14468603 (+)
LOC122353763 NA other upstream 136000 14352300 ~ 14354705 (+)
G81717 NA other upstream 184128 13887333 ~ 14306577 (+)
G81722 NA other upstream 460604 14021790 ~ 14030101 (+)
palm1a palm,palm1a,LOC107656088,LOC107674557,LOC107723854,LOC107753814,LOC107593145 other downstream 331378 14824407 ~ 14855872 (+)
G82072 LOC107753843,LOC107680456,LOC107562070,LOC107718864,LOC107563489 other downstream 787950 15280979 ~ 15282157 (+)
LOC122354546 abcc10,LOC107753844,LOC107680503,LOC107674523,LOC107718869,LOC107680501 other downstream 813623 15306652 ~ 15331632 (+)
hap1 si:dkey-28e7.3,LOC107680538,LOC107674537,LOC107718874,LOC107753848,LOC107564818,LOC107562051 other downstream 896037 15389066 ~ 15400192 (+)
col9a1a col9a1a,LOC107674561,LOC107563512,LOC107753862,LOC107680514,LOC107718896,LOC108438673 other downstream 963853 15456882 ~ 15491776 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G221311 NA non-coding CI01000051 null 7292239 ~ 7293753 (+)
tiger barb (Puntius tetrazona) LOC122330457 NA non-coding NC_056723.1 CM032092.1 14165648 ~ 14166969 (-)
mexican tetra (Astyanax mexicanus) G185263 NA non-coding NC_035917.1 CM008320.1 18139965 ~ 18149704 (+)