G82072 (LOC107753843,LOC107680456,LOC107562070,LOC107718864,LOC107563489)


Basic Information

Item Value
gene id G82072
gene name LOC107753843,LOC107680456,LOC107562070,LOC107718864,LOC107563489
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 15280979 ~ 15282157 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU121497
TTTAGGTCTGGCTTCAACCCATAAAATGGCATTGAAAGACTAAGTAGCCATCCTGGCAAAAAACGGCCATCAACGCACTCAAGGAAAGGGGCTTCGCCCCACTGAACCCCACTGCTATTGATCACATAACTATCTCCACGTGCCCACTTGGGAGTGTCTAGGGTGCTTAGGTCATTTAGAAGAACCCGTTTCGACAAGGCATGGAGGGGTGGAGCGCTGGACTTAAACATATCAAACCAGCTTTGGTCAGGAGCAGGAGGACGAAAGCTGCTCCAGGCGGATGTCAGGTCCTGCAGAAGAATGTCTTGGGTTGTGCCTTTGGAGGCACGGAGCACCAGCTGCGGCTGTTGGATCGTGGGGTCAGCGTCGAATGTTAGAAAAGCTCGTCTGACTAGGCCCGGCCTGTCTCCTTCGAGCATGGCCCGCACCAGTGCATGGTACCACTCGATGTCCTCTCGTACACTGGTTTCCCTCAGCTCACTAGCTTGGAATATCAGGTTGAGAAAGTTGGCAGCATTGGTCAGAGATGCTATGGCTTGGTGCAAGAGAGGGAGAAGGTCTCTAGGCGGAGATCCCAGTCGAACAGGCAGCTGGAAACTCTTTGTGCATGTAGAGGCAGCCAAAGTAGATGAATTGCCAGTGTAGAGGTAGCTCTCCGCGGCAGACTGGTCCTCCTCCGTGATCGCTTTTACTGGACTGGTGGGTCGAGCACTGGTAGACGAGCTCTTTCCTGCTACGGTATTTAGGTCAGTGGGACAAGGTGTTGGGGTGATCTCCAAGCTGGACGTGTCTTCAAGTTCAAACACAGTGGTGGTCTGAGCAGAGAGCAGGTTGGGAAGTAGCAGCAGCAGAGGTAGTAGTCCAACACACCGGCCCATCCTTGAAGCAAGTGCTCCTCCAATGCTTTTTGTGAAAGTAAAGATCATCTTTGTGCTGTCTCACATCCTGAAAGACACTTAGCCTTCTTGTCTTCTCTATCCCTGGATTTGTTTCTTCTCTCCTCTTGTTGTAAGCTGATTGACAGGTGTCAGTGCTGATAGAGTTCTCGATTTCACAGACAAGTAAGCATGCATTCATGCACAGACCGACTATTCATTTTTGAAGGTGAAGGAGGCCATGCTTAAACTCCATTGCGATCAGTCGGTCGGGTCCACCCTAGATGCTGGAACCAACACAGCG

Function

NR:

description
PREDICTED: probable G-protein coupled receptor 179

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121497 True 1179 TUCP 0.51 1 15280979 15282157

Neighbor

gene id symbol gene type direction distance location
mrpl45 mrpl45,LOC107753856,LOC107680544 coding upstream 13140 15264806 ~ 15267839 (+)
npepps npepps,LOC107718863,LOC107674532,LOC107753845,LOC107680533 coding upstream 16479 15246948 ~ 15264500 (+)
LOC122354562 si:ch211-156l18.7,LOC107753880,LOC107562056 coding upstream 83738 15194515 ~ 15197241 (+)
krt95 LOC107753879,LOC107562057,LOC107746886 coding upstream 90647 15187469 ~ 15190332 (+)
LOC122354453 LOC107753800,LOC107655990,LOC107723864,LOC107602815,LOC105898142,LOC103367601 coding upstream 109699 15166761 ~ 15171280 (+)
socs7 socs7,LOC107753846,LOC107680565,LOC107718866,LOC107674567 coding downstream 1576 15283733 ~ 15296180 (+)
sp2 sp2,LOC107680542,LOC107718867,LOC107674551,LOC107753850 coding downstream 15688 15297845 ~ 15305484 (+)
wipf2a LOC107680504,LOC107562076,LOC107753881,LOC107718872,LOC107674524,LOC107563570 coding downstream 50765 15332922 ~ 15342417 (+)
cdc6 cdc6,LOC107718871,LOC107674517,LOC107753851,LOC107680478,LOC107562079 coding downstream 61402 15343559 ~ 15348297 (+)
krt99 LOC107753854,LOC107680487,LOC107674510,LOC107562074,LOC107718894,LOC107564824 coding downstream 121696 15403853 ~ 15410909 (+)
G82071 LOC107753843,LOC107562070,LOC107563489,LOC107718864,LOC107680456 non-coding upstream 4833 15274713 ~ 15276146 (+)
G82060 NA non-coding upstream 39697 15236600 ~ 15241282 (+)
G82055 NA non-coding upstream 78444 15197912 ~ 15202535 (+)
G82032 NA non-coding upstream 116456 15164324 ~ 15164523 (+)
G82031 NA non-coding upstream 122037 15158590 ~ 15158942 (+)
G82080 jupa,LOC107674533,LOC107562072,LOC107753847,LOC107680531,LOC107577149 non-coding downstream 71536 15353693 ~ 15354803 (+)
LOC122354565 NA non-coding downstream 92797 15374954 ~ 15383449 (+)
LOC122354481 NA non-coding downstream 133490 15415647 ~ 15418985 (+)
G82096 NA non-coding downstream 142260 15424417 ~ 15429408 (+)
G82109 LOC107718897,LOC107674554,LOC107680534,LOC107597144 non-coding downstream 216957 15499114 ~ 15499972 (+)
palm1a palm,palm1a,LOC107656088,LOC107674557,LOC107723854,LOC107753814,LOC107593145 other upstream 425107 14824407 ~ 14855872 (+)
zfyve9b zfyve9b,LOC107753830,LOC107656105,LOC107562066,LOC107723065,LOC107665831 other upstream 792170 14472566 ~ 14488809 (+)
ptgfr ptgfr,LOC107753832,LOC107562064,LOC107655972,LOC107665835 other upstream 812376 14465892 ~ 14468603 (+)
LOC122353763 NA other upstream 926274 14352300 ~ 14354705 (+)
G81717 NA other upstream 974402 13887333 ~ 14306577 (+)
LOC122354546 abcc10,LOC107753844,LOC107680503,LOC107674523,LOC107718869,LOC107680501 other downstream 24495 15306652 ~ 15331632 (+)
hap1 si:dkey-28e7.3,LOC107680538,LOC107674537,LOC107718874,LOC107753848,LOC107564818,LOC107562051 other downstream 106909 15389066 ~ 15400192 (+)
col9a1a col9a1a,LOC107674561,LOC107563512,LOC107753862,LOC107680514,LOC107718896,LOC108438673 other downstream 174725 15456882 ~ 15491776 (+)
G82131 NA other downstream 248436 15530593 ~ 15531490 (+)
mcf2l2 mcf2l2,LOC107656072,LOC107753795,LOC107563754,LOC107674528,LOC108439422,LOC108270998,LOC107718904 other downstream 459480 15741637 ~ 15802025 (+)

Expression


Co-expression Network