LOC122353953 (LOC107569407,LOC107688685,LOC107569398,LOC107688486)


Basic Information

Item Value
gene id LOC122353953
gene name LOC107569407,LOC107688685,LOC107569398,LOC107688486
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 190906 ~ 192857 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251863.1
AAGAGTTACTATTCAGACAGATCCTCATTCCATAAGATCTGTACATTTCTCAGCAGTATTTTGGCTATATAAGCTTTCACTGAACAGCACTAACACACACCGAATGAAGGACCATCCACACCGAATCCTCATCTGACAAGAGAAGGTCTGTGATTTGGAGAAATGAAGGTTTATCAGAGCGTCCTGCTTCTCTTCAGCTGCCAGTTACTTCCTACTCTGGCTTTAGACTGTACCGTGATGAGCGGTAACCTGAAGCAGATAGACGCTGGGTCTGGTTTAGTCAGCGGAGTGAACATTTATAACGAGGTGTTCATCCTGGAAGATAACGTCTTCTCAAAGATCAACATGTCTCTGAAGCATTTCAGTGTTGGTCCTGCTGGTCAGCTCGGGGTGGATGCAGCAAACAACATCTTCAAGCTTCAGAGTGGCAGGTTTATTCAGTTTCCAGGACTTCTCAAACAGGTGGATGCTGGAGGCGATCAGATCATTGCAGGAGTCAATATGAATGATGACATATTCTGCTTAAATATGGATGCTAACGACAAATGGCCATCCAGCAGTATTCCTTGGACTCAGATCGGTGGAAAGCTGAAGTATTACAGCTGTGGTCCGTACAGCTGCTGGGGCGTCAACAGCTACGACCAAATCTACATCAATAGGGATGTGTCTAATAATGCCTGTTCTGGGAGTGGCTTTGTGAATATTCCTGGACTTCTGTCCATGATTGAAGTAGCAACTGATGGCAGCGTCTTTGGTGTTAACTATCAAGGGAATTTGTACCAAAGAACTGGCGTCTCTCGCGCCAACCCGTCTGGCACGGACTGGATCTCAATGGTTGTCTGTCCCAGCAGCCACAAGCATGTGAGCTTCGACCTGGGAGTGCTGTGGGTGGTGTGTGTGGACGGCTCCATCCGTAAATGTACTTTATAGAGAAACAAGAATTCTCAGAGTAAACTAATTATGATGATCAAAGTCATTATTAACAGAAAGCCAAGAGCTTGATTgtacattcttttcttttttcttttccttctttcttgttgaataaataaagcatctATCTCATCAA

Function

NR:

description
PREDICTED: fish-egg lectin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251863.1 True 1069 mRNA 0.44 6 190906 192857

Neighbor

gene id symbol gene type direction distance location
LOC122354020 iars,LOC107697556 coding upstream 74405 69645 ~ 116501 (+)
LOC122353958 sarnp,LOC107683632,LOC107696044 coding downstream 87823 280680 ~ 281562 (+)
LOC122354142 zgc:172352,LOC107701181,LOC107575329,LOC107747702,LOC107684012 coding downstream 159098 351955 ~ 365169 (+)
si:ch211-159e12.5 NA coding downstream 204334 397191 ~ 403408 (+)
slc11a2 slc11a2,LOC107669929,LOC107561796,LOC107747835,LOC107677945 coding downstream 232623 425480 ~ 438326 (+)
npffl npffl,LOC107747841,LOC107669931,LOC107738884,LOC107677943 coding downstream 247363 440220 ~ 442079 (+)
G78052 NA non-coding upstream 16433 171385 ~ 174473 (+)
G78063 NA non-coding downstream 54497 247354 ~ 367172 (+)
G78066 NA non-coding downstream 57763 250620 ~ 251865 (+)
G78067 cyp27b1 non-coding downstream 78139 270996 ~ 411425 (+)
G78072 NA non-coding downstream 145979 338836 ~ 339676 (+)
G78061 NA non-coding downstream 157762 350619 ~ 350944 (+)
LOC122353551 NA other upstream 125758 63006 ~ 65148 (+)
G78055 LOC107569407,LOC107569398,LOC107688685,LOC107571108 other downstream 140212 333069 ~ 334396 (+)
LOC122354326 LOC107747702,LOC107684012,LOC107574232,LOC107701181,LOC107737133 other downstream 155660 348517 ~ 350442 (+)
G78083 NA other downstream 216476 409333 ~ 410684 (+)
G78084 NA other downstream 219182 412039 ~ 412753 (+)
iars1 iars,LOC107697556 other downstream 393558 586415 ~ 599371 (+)

Expression


Co-expression Network