CI01000000_17507574_17510080 (MDP1)


Basic Information

Item Value
gene id CI01000000_17507574_17510080
gene name MDP1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 17507574 ~ 17510895 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_17507574_17510080.mRNA
ATGGCGCCACTTCCGCATTACCGCGGCACTGTGCGGGATTCAACACGTACCAAGGTTTCCATTTATCACGATACTGAAAAGATCCTGAGCTCACTCCATAGTCAGGGATTCAAGATCGGCATTGCATCACGAACCACCGAGACGGAAGGAGCCAATCAGCTGCTCTCACTCTATAAACTCAACCAATACATCACCTTTAAGGAGATCTACCCTGGGTCAAAGGTCACTCACTTTAAAAGGCTGAAAGCTGACAGTGGCGTCCAGTTTTCTGACATGATGTTCTTTGATGATGAGGATAGGAACATCGTGGAGGTTGGCAAACTAGGTGTTCACTGCGTGTTGGTTCGTAATGCGATCACCTCTGGTCTAGTCAATAAAGCACTGGAGGAGTTCAGTAAGAAGCAGTGATGGTGTCTGGTCCCGCAGAGATGCAGCTGCTGCAAATGAAGAAGAATCTGTTCGCTATGCAAATGGCATGTTATAGAGAACTAGGAGTGTCATGTTCAGTGGTTATTTCTGTGTAATCAACTGTCCAATGATAGTTTTTAACTTGACAAATGTAATTGGCGAAAGCATAAAATGCAATTTTAGCATTTAAATAATTTAGATTTTTGGTACATTTGTAATGCAATTTATTTATATTTTTATTTTTCAGTGTATAAATTGATAATTGCACCTGTGCTTAATTTTTTATCTAATAAACCCCTGGTTTCACAGACAAGGATTAAGCTATTCCTAGACTAAAATGCATGTTTGACCTGTTTTAACTGAAAGCAACTTGTACTGACATCTTAGAATATGTCAGAGCCATTTGTTTGGGTTCAAGATGCACATTAGTAATGTTTTTTTTTCTAGGGTATGTTTACGAAAGATACTTAAATACCCTAAATTGAACTAATGCCTAATCCTGGCTTAGTCTAAGCCCTGTCTGTGAAACCGGGCCAAAGACCGTTAAGTTAAACTTTTAACTATACAGCTCACACAGTTTGTAAAACAAAAAGGTCAGTGTTTTAATTGTTAATGTATGTGGCATTTAAATATGTTCTATTTTTACAATAGAAAAATATTTTATATTTATAAAACATGGCATCCAATTTCTGTTTGTCTTTCTTTTTTCTCTTGGTGTGTTCCTGGATATTTTCAACTTATTTCTCACAAAAATATTTTTTTAAAATAAAAGTAAACATTCTAGTTTTAAAGGATAGCCTTAGATATATACTGTA

Function

symbol description
mdp1 Predicted to enable acid phosphatase activity. Predicted to be involved in fructosamine metabolic process and peptidyl-tyrosine dephosphorylation.

GO:

id name namespace
GO:0016791 phosphatase activity molecular_function

KEGG:

id description
K17619 MDP1; magnesium-dependent phosphatase 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_17507574_17510080.mRNA True 1223 mRNA 0.36 5 17507574 17510895

Neighbor

gene id symbol gene type direction distance location
CI01000000_17501554_17504867 NA coding upstream 2670 17501554 ~ 17504904 (+)
CI01000000_17478377_17481058 NA coding upstream 25403 17478377 ~ 17482171 (+)
CI01000000_17388536_17403918 FAM13B coding upstream 102447 17387718 ~ 17405127 (+)
CI01000000_17361598_17367002 NA coding upstream 140500 17360882 ~ 17367074 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 coding upstream 162437 17339154 ~ 17346200 (+)
CI01000000_17540827_17545953 DPF2L coding downstream 29932 17540827 ~ 17546145 (+)
CI01000000_17642401_17643835 NA coding downstream 131304 17642199 ~ 17643839 (+)
CI01000000_17644414_17655141 CPEB4 coding downstream 133458 17644353 ~ 17655748 (+)
CI01000000_17672091_17673742 MSX2A coding downstream 160777 17671672 ~ 17675142 (+)
CI01000000_17729584_17730495 NA coding downstream 218689 17729584 ~ 17730599 (+)
G11314 NA non-coding upstream 91479 17415856 ~ 17416095 (+)
G11309 NA non-coding upstream 160022 17347285 ~ 17347552 (+)
G11057 NA non-coding upstream 444427 17062923 ~ 17063147 (+)
G11053 NA non-coding upstream 451424 17055911 ~ 17056150 (+)
G11012 NA non-coding upstream 472731 17032576 ~ 17034843 (+)
G11251 NA non-coding downstream 39813 17550708 ~ 17582913 (+)
G11413 NA non-coding downstream 193440 17704335 ~ 17704550 (+)
G11423 NA non-coding downstream 216983 17727878 ~ 17729245 (+)
G11435 NA non-coding downstream 243695 17754590 ~ 17759604 (+)
G11441 NA non-coding downstream 259957 17770852 ~ 17771247 (+)
G10201 NA other upstream 1577012 15930266 ~ 15930562 (+)
G9201 NA other upstream 3272633 14215024 ~ 14234941 (+)
G7522 NA other upstream 5328566 12178369 ~ 12179008 (+)
G7514 NA other upstream 5370566 12136522 ~ 12137008 (+)
G11465 NA other downstream 373058 17883953 ~ 17887462 (+)
G11521 NA other downstream 521844 18032739 ~ 18164112 (+)
G11801 NA other downstream 1169972 18674116 ~ 18745376 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_022597 si:dkeyp-27c8.2 coding NC_007134.7 CM002907.2 40755764 ~ 40766518 (-)