LOC122354142 (zgc:172352,LOC107701181,LOC107575329,LOC107747702,LOC107684012)


Basic Information

Item Value
gene id LOC122354142
gene name zgc:172352,LOC107701181,LOC107575329,LOC107747702,LOC107684012
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 351955 ~ 365169 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043252190.1
tACGCAGCGATCCTCGTTCCTCGACTTGGACAGATGTTCATAGAATACGATCATCCCTGGAAGAAACTGTCTGAGGAGTTTGGTCCTCACACCAAGTCCGTCACAGAGGCTCTCCTCACGCTGCTCCTGGTGTATCCTCGGAGGAATCTTTCTGCAGACCAGTGGCGCAGCGCTCAGCTCTTGTCTCTTCTGGCGTCTCCCGCCACCATGCTGAGCCCCGCGTGCTGCGACACCATGGCTTGTGAGTATCTGTCCATGGAGGTGATGGAGCGCTGGATCCTCATCGGCTTCATGTTGTGCCACAGCAGTCTAAATACCAATGCTAACTCTCAGACTTTATGGAAGATGGCCCTCCGTAACGGCCTGTACATCACAGTCATCAGAGACGAGGTTCTCAACATGCACAAGCTCTCGGAGGAGTTCTTCGACGGTCTCAAAGGATACAGTAAGCGCATCCCTGACATCAAAGAATGTAAAGAGTACGTCATCACTAACTGCGGGGCATTGCGGAGAGAGAAGCGTAACTTCCTGAGGAATGCCCTGAAGGAACTTACCAAGGTTTTGGAGGATGAACCTGCATTGCTCGGACCCAAGgctttgtttgtgttcatgGCGCTGTCGTTCTCTCGTGATGAAGTGCTCTGGCTTGTGCGTCATGCTGACAACATCCCCAAAACCAAGACCCCGGAGGACTATGCAGACTCACAGATGGCCGAGCTCCTCTACTACATGGAGAAGCTGCGCACTCTTTTGGCTCAACACAGATATGTTATACAACGCTACCATCTTCAGTACTTATCACAGTATGATGCTCTAGCACTGAACGACACCATTCAGGGTATGCACGTCTGTCCGGAGGAAGAATCGATTCTTATGTCTTCATTTGTCTCAACTCTGTCTGCAATGAGTCTCAAGCACTTGGACGCAGGAGAAGAGTTTGACCTGAAACCATTCAGACTGGACTGGTTTAGATTGCAGGCTTACACCAGTATTGGTAAAGCTCCTCTGGCGCTGAAGGACTACCCTGAGCTCGCCAAGGTCATGAACATGGCCCAGTTTCACACGAGGATGATGGACAATGTGAACGAACTCCTCTGTGAGACGGCTGATCTCTCTATCCTCTGTTTCCACTCGCGGGTGTTCGAGAAGCTGTTCTCTCAGAGCAGCGAGGACGTGTCCATGCAGCGCTACCTCACGGCTTTCCCCGTCATCTGTTCACACTTCAGTCAGTGTCTGCATCCGCTCTGTCCAGAAGAGACCGAGGAAACAGAGGCTCAAAGCCTGAGGCTGTGTGTGACCTTTCTGGAGGAGATTTCCCGTCTGACGTGTTCGGTTGTGCTGGAGATATGTGCTGAACAGTGCAACCTACATGAGAAGTTATTGCCTAAACACAGTGCAGAGACCATCAGTACAGCACGCAATAAAAAACTGAAGAAGTCATTACCAAAGAAAGGAGACATGCCGAAAGAGAAACCAGGGACGGAAAGCCTCCGAAAGGACAGAGTCATCGTCACAAATCTGGATAAGATGCACCTGGCTCTGACAGAACTGTGTGCTTCCTACAGTATCTGCGCTGATTTCAGCGTGTTCAAGCACATCCTTGTACCTGCTGAGTTCCTGCTCTCACAGCTGGAGATTAGACTCAACAAGGTTATTGTGCAGATGGCCAATTATAACCAGAGCACCCACGAAATCGCCCGGCCCTCGGAGCTGCTGGCTGGGATTCAGGCTTATGTTACCAGTCTGCAAAGCCTCAGCTGCTACATCAACATTGACGTCACGCGCCTGGTGAAGAGCGTCTTGTTGCAGCAGACGCAGCCGCTGGACTCGTATGGAGCACAGACCATCACAACGCTCTACACAAACTGGTTTCTGGAGGGTCTCTTGCGTCAGGCCAGCAGCGCTCTCATAGTCCACTGTCCTACCACACAGTGTTTTGTGAACCAGAACACTGAGAATGAGCAGAACTTTCGTGCTGAAGAATACTCCGACATTTGTGGTTTGCGATCGTTGGCTGAACTGATTGGTCCTTATGGACTGAAGTTTTTAAATGAGAACCTCATGTGGCACATCATATCCCAAGTTGGAGAACTAAAGAAACTCGTAAGTGACAACATGGATGTCCTCGTACAAATGAGAGCTAACTATGAGAAACCTGAAGCAATGAATGAACTTCAAAAGAAACTCACAGgtagtgaaaatgttttaaagagaatGACCATTATCGGCGTGATTCTGTCGTTCCGCTCCATGGTGCAAGACGCTCTTGAGGAGGTCATGGACAGACACTGCCCGTTTGTGATGAGACCCATCAGGTGTCTGAAGGACTTCATCTACCCTGACGGTGACATTAAGGTGTCACTCGGTGTGTATGAAATGGCTTCGGCGGCTGGTTTGCCGTGTGAGATCGACCCGGCGCTGGTTTCAGCCATCGCAAACATGCAGACAGACAACTCATCCACTGAGGAGGATTTCAAAATCACCTGCCTGCTGCTAGTTTTTATAGCCGTGTCTTTACCCACGCTGTGCCTGGATCCAAACTCCTTCTACAGCCGAGAACATGGAGGTCATCAAAACAACATTCATTGTCTGGCGACTGCAATAAATCACCTCGCGGCAGCCATGTTTACTGTCCAGAGAAAAAATATCCAGACTCAGCTTCAAGAGTTCCTGAAGGTCTCTCTCACCGCCGGATGCCCAGCAAgagtttcatattttataattcatacACAGAGCAAACATTTACTGAAGATCTTGGTGGCATCATCTATCTTGCTGCAGTTGGGTCAGAATGTGGAACGAGTGGAAATAAAGAACAGAGATTCAGTTTATCTTCTTCTACACATGACGGTGGAGCAGTCACCGTTCCTGAGTCAAGACATGCTGGAAACGTGTTTTCCATACGTACTCCTCAGAAACGCTTACAGAGAAGTGCACAAGATCTTCATCCGCACTATGGGctaaactttgtttttgtttttgtatatacaacccctggcaaaaagtatggaatcaccagtcttggacg
>XM_043252191.1
tACGCAGCGATCCTCGTTCCTCGACTTGGACAGATGTTCATAGAATACGATCATCCCTGGAAGAAACTGTCTGAGGAGTTTGGTCCTCACACCAAGTCCGTCACAGAGGCTCTCCTCACGCTGCTCCTGGTGTATCCTCGGAGGAATCTTTCTGCAGACCAGTGGCGCAGCGCTCAGCTCTTGTCTCTTCTGGCGTCTCCCGCCACCATGCTGAGCCCCGCGTGCTGCGACACCATGGCTTGTGAGTATCTGTCCATGGAGGTGATGGAGCGCTGGATCCTCATCGGCTTCATGTTGTGCCACAGCAGTCTAAATACCAATGCTAACTCTCAGACTTTATGGAAGATGGCCCTCCGTAACGGCCTGTACATCACAGTCATCAGAGACGAGGTTCTCAACATGCACAAGCTCTCGGAGGAGTTCTTCGACGGTCTCAAAGGATACAGTAAGCGCATCCCTGACATCAAAGAATGTAAAGAGTACGTCATCACTAACTGCGGGGCATTGCGGAGAGAGAAGCGTAACTTCCTGAGGAATGCCCTGAAGGAACTTACCAAGGTTTTGGAGGATGAACCTGCATTGCTCGGACCCAAGgctttgtttgtgttcatgGCGCTGTCGTTCTCTCGTGATGAAGTGCTCTGGCTTGTGCGTCATGCTGACAACATCCCCAAAACCAAGACCCCGGAGGACTATGCAGACTCACAGATGGCCGAGCTCCTCTACTACATGGAGAAGCTGCGCACTCTTTTGGCTCAACACAGATATGTTATACAACGCTACCATCTTCAGTACTTATCACAGTATGATGCTCTAGCACTGAACGACACCATTCAGGGTATGCACGTCTGTCCGGAGGAAGAATCGATTCTTATGTCTTCATTTGTCTCAACTCTGTCTGCAATGAGTCTCAAGCACTTGGACGCAGGAGAAGAGTTTGACCTGAAACCATTCAGACTGGACTGGTTTAGATTGCAGGCTTACACCAGTATTGGTAAAGCTCCTCTGGCGCTGAAGGACTACCCTGAGCTCGCCAAGGTCATGAACATGGCCCAGTTTCACACGAGGATGATGGACAATGTGAACGAACTCCTCTGTGAGACGGCTGATCTCTCTATCCTCTGTTTCCACTCGCGGGTGTTCGAGAAGCTGTTCTCTCAGAGCAGCGAGGACGTGTCCATGCAGCGCTACCTCACGGCTTTCCCCGTCATCTGTTCACACTTCAGTCAGTGTCTGCATCCGCTCTGTCCAGAAGAGACCGAGGAAACAGAGGCTCAAAGCCTGAGGCTGTGTGTGACCTTTCTGGAGGAGATTTCCCGTCTGACGTGTTCGGTTGTGCTGGAGATATGTGCTGAACAGTGCAACCTACATGAGAAGTTATTGCCTAAACACAGTGCAGAGACCATCAGTACAGCACGCAATAAAAAACTGAAGAAGTCATTACCAAAGAAAGGAGACATGCCGAAAGAGAAACCAGGGACGGAAAGCCTCCGAAAGGACAGAGTCATCGTCACAAATCTGGATAAGATGCACCTGGCTCTGACAGAACTGTGTGCTTCCTACAGTATCTGCGCTGATTTCAGCGTGTTCAAGCACATCCTTGTACCTGCTGAGTTCCTGCTCTCACAGCTGGAGATTAGACTCAACAAGGTTATTGTGCAGATGGCCAATTATAACCAGAGCACCCACGAAATCGCCCGGCCCTCGGAGCTGCTGGCTGGGATTCAGGCTTATGTTACCAGTCTGCAAAGCCTCAGCTGCTACATCAACATTGACGTCACGCGCCTGGTGAAGAGCGTCTTGTTGCAGCAGACGCAGCCGCTGGACTCGTATGGAGCACAGACCATCACAACGCTCTACACAAACTGGTTTCTGGAGGGTCTCTTGCGTCAGGCCAGCAGCGCTCTCATAGTCCACTGTCCTACCACACAGTGTTTTGTGAACCAGAACACTGAGAATGAGCAGAACTTTCGTGCTGAAGAATACTCCGACATTTGTGGTTTGCGATCGTTGGCTGAACTGATTGGTCCTTATGGACTGAAGTTTTTAAATGAGAACCTCATGTGGCACATCATATCCCAAGTTGGAGAACTAAAGAAACTCGTAAGTGACAACATGGATGTCCTCGTACAAATGAGAGCTAACTATGAGAAACCTGAAGCAATGAATGAACTTCAAAAGAAACTCACAGgtagtgaaaatgttttaaagagaatGACCATTATCGGCGTGATTCTGTCGTTCCGCTCCATGGTGCAAGACGCTCTTGAGGAGGTCATGGACAGACACTGCCCGTTTGTGATGAGACCCATCAGGTGTCTGAAGGACTTCATCTACCCTGACGGTGACATTAAGGTGTCACTCGGTGTGTATGAAATGGCTTCGGCGGCTGGTTTGCCGTGTGAGATCGACCCGGCGCTGGTTTCAGCCATCGCAAACATGCAGACAGACAACTCATCCACTGAGGAGGATTTCAAAATCACCTGCCTGCTGCTAGTTTTTATAGCCGTGTCTTTACCCACGCTGTGCCTGGATCCAAACTCCTTCTACAGCCGAGAACATGGAGGTCATCAAAACAACATTCATTGTCTGGCGACTGCAATAAATCACCTCGCGGCAGCCATGTTTACTGTCCAGAGAAAAAATATCCAGACTCAGCTTCAAGAGTTCCTGAAGGTGGCATCATCTATCTTGCTGCAGTTGGGTCAGAATGTGGAACGAGTGGAAATAAAGAACAGAGATTCAGTTTATCTTCTTCTACACATGACGGTGGAGCAGTCACCGTTCCTGAGTCAAGACATGCTGGAAACGTGTTTTCCATACGTACTCCTCAGAAACGCTTACAGAGAAGTGCACAAGATCTTCATCCGCACTATGGGctaaactttgtttttgtttttgtatatacaacccctggcaaaaagtatggaatcaccagtcttggacg

Function

NR:

description
PREDICTED: nck-associated protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043252190.1 True 3028 mRNA 0.49 26 351955 365169
XM_043252191.1 False 2947 mRNA 0.49 26 351955 365169

Neighbor

gene id symbol gene type direction distance location
LOC122353958 sarnp,LOC107683632,LOC107696044 coding upstream 70393 280680 ~ 281562 (+)
LOC122353953 LOC107569407,LOC107688685,LOC107569398,LOC107688486 coding upstream 159098 190906 ~ 192857 (+)
LOC122354020 iars,LOC107697556 coding upstream 235454 69645 ~ 116501 (+)
si:ch211-159e12.5 NA coding downstream 32022 397191 ~ 403408 (+)
slc11a2 slc11a2,LOC107669929,LOC107561796,LOC107747835,LOC107677945 coding downstream 60311 425480 ~ 438326 (+)
npffl npffl,LOC107747841,LOC107669931,LOC107738884,LOC107677943 coding downstream 75051 440220 ~ 442079 (+)
alas1 alas1 coding downstream 77784 442953 ~ 448514 (+)
LOC122354000 NA coding downstream 88393 453562 ~ 456072 (+)
G78061 NA non-coding upstream 1011 350619 ~ 350944 (+)
G78072 NA non-coding upstream 12279 338836 ~ 339676 (+)
G78045 NA non-coding upstream 22933 184597 ~ 329022 (+)
G78043 NA non-coding upstream 29971 179562 ~ 321984 (+)
G78038 NA non-coding upstream 48737 160750 ~ 303218 (+)
LOC122354311 NA non-coding downstream 2634 367803 ~ 373639 (+)
G78047 NA non-coding downstream 37276 402445 ~ 405473 (+)
LOC122353670 NA non-coding downstream 38283 403452 ~ 404970 (+)
G78081 LOC107747831,LOC107561793,LOC107684010 non-coding downstream 40566 405735 ~ 408404 (+)
G78089 NA non-coding downstream 59217 424386 ~ 425078 (+)
LOC122354326 LOC107747702,LOC107684012,LOC107574232,LOC107701181,LOC107737133 other upstream 1513 348517 ~ 350442 (+)
G78055 LOC107569407,LOC107569398,LOC107688685,LOC107571108 other upstream 17559 333069 ~ 334396 (+)
LOC122353551 NA other upstream 286807 63006 ~ 65148 (+)
G78083 NA other downstream 44164 409333 ~ 410684 (+)
G78084 NA other downstream 46870 412039 ~ 412753 (+)
iars1 iars,LOC107697556 other downstream 221246 586415 ~ 599371 (+)
atp2b2 atp2b2,LOC107561799,LOC107570616,LOC107746712,LOC102776443,LOC107697566 other downstream 237969 603138 ~ 709490 (+)
atg7 atg7,vgll4,vgll4b,LOC107697561,LOC107750032,LOC107750033,LOC107697562 other downstream 483006 848175 ~ 913799 (+)

Expression


Co-expression Network