G8209 (c1ql3b,LOC107708591,LOC107747511,LOC107599856,LOC107681760,LOC107566459,LOC107691085,LOC107691073)


Basic Information

Item Value
gene id G8209
gene name c1ql3b,LOC107708591,LOC107747511,LOC107599856,LOC107681760,LOC107566459,LOC107691085,LOC107691073
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 565896 ~ 566914 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU12311
CTGGTTATTCTTGCACAGATCAGCCCACATGCTGGTCCCGTCACCTCCTCTCATTAATACGTGATACACGAAAAAGTAGATCCCTGGGATGGAGCAGGTGAATTTACCGCTGGTGGGGTCATAGTGATTGCCCAGGTTAGTGACCACATCGTCAAACTTCAGCACCTCGTAGCCCTCGTGTTGTTTTTTGAGTCCCGCGTAGAAGGCGATTTTGGGCACGGTGCTGTACGTCGCCGCACTTATGACACCGGTGACTCCGGGCGGACCGGGTAATCCTGGTGGCCCCGGTTCCCCGATGACCCCAGGTGGACCTGGAGGTCCGGGTGGACCCGGCGGACCAGGTTGACCCCTCGGACCGATCCTTCCCGAGCGCCCTTGCTCTCCTTTCGCACCGCGAATGAAAGTTGGTGGGGACTGAACCAAGCGGTTGTCTGTCGGTGCTGATGATGGAGACTTTGTTCCGTACGGATCGCACACCATGCGGCACGCGCCGAGCATCTCGTAGCGCGGGTCGGATCCCGCCGCGTTGACCAGCACCGGGATGAGAATAACCAGCACCAGCACCATGACAACACCCAGCACGCCCGTGGCGATCACCCGCGCTCTGACGCCCAGTCTCGACAGCACCGGGCGCGCCTCGCGCTGCGATTTACGCGCAATCTTGCTCGGCGCGGAAGAAAcgccaaaaaaacaaattcaacttCCCTGCAGCTCCAGGGAAAGTCAATTAACTTTGACCGAAGACGCTATATCATTCCCCGAATTGACGTAAACGTCACCTGGActaactttttgtttgtttataatgaaAACGAAGTTACAGACTGGgaacacaaacataaatgtgTGAGAGATGCTTTACAGCCTTGCTTTCTCACCTGAGGGTGGGTGGTGGGTTGGAAACATCgtgagaaagacaaagagagagagagagagagagagagggagtgcgCGCGCACGTGAGCTGTATCTTTAGAAAGA

Function

symbol description
c1ql3b Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Orthologous to human C1QL3 (complement C1q like 3).

NR:

description
PREDICTED: complement C1q-like protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12311 True 981 lncRNA 0.55 2 565896 566914

Neighbor

gene id symbol gene type direction distance location
LOC122325106 pter,LOC107681810,LOC107599857 coding upstream 906 559979 ~ 564990 (+)
LOC122325174 NA coding upstream 325500 238742 ~ 240396 (+)
LOC122325083 erich6,LOC107681751,LOC107708872,LOC107708884 coding upstream 332486 224016 ~ 233410 (+)
wu:fi34b01 NA coding upstream 390888 171622 ~ 175008 (+)
LOC122325155 selt1a,selenot,LOC107681817,LOC107708642,LOC106599070 coding downstream 38172 605086 ~ 609167 (+)
zgc:153615 zgc:153615,LOC107747506,LOC107691014,LOC107708656,LOC107599852,LOC108430722,LOC103026425 coding downstream 82070 648984 ~ 654781 (+)
zmp:0000001127 NA coding downstream 91843 658757 ~ 662000 (+)
txndc12 txndc12,LOC107708672,LOC107681819,LOC107690994,LOC107599851,LOC107566463,LOC107739415 coding downstream 96877 663791 ~ 667351 (+)
slc25a24l slc25a24l,LOC107708925,LOC107681683,LOC107751862,LOC107566460,LOC107599866 coding downstream 118309 685223 ~ 692838 (+)
G8207 NA non-coding upstream 49927 487780 ~ 515969 (+)
LOC122325207 gpt2l,LOC107599855,LOC107708598,LOC107691046,LOC107747508 non-coding upstream 309010 248481 ~ 256886 (+)
G8169 NA non-coding upstream 345152 210641 ~ 220744 (+)
LOC122325201 NA non-coding upstream 402249 162991 ~ 163647 (+)
G8151 NA non-coding downstream 4115 571029 ~ 603945 (+)
G8213 gpt2l,LOC107599855,LOC107691046 non-coding downstream 16448 583362 ~ 584348 (+)
LOC122325219 NA non-coding downstream 67237 634151 ~ 634766 (+)
LOC122328698 NA non-coding downstream 76120 643034 ~ 644926 (+)
G8173 NA non-coding downstream 101390 668304 ~ 671563 (+)
LOC122360757 fam73b,miga2,miga1,LOC107599369,LOC107705989,LOC107675762,LOC107737175,LOC107661559,LOC107708777,LOC107681767,LOC107722319,LOC107703235,LOC107558173 other upstream 108151 447162 ~ 457745 (+)
LOC122325097 fuz,LOC107708997,LOC107691039 other upstream 320532 241451 ~ 245364 (+)
G8167 NA other upstream 342529 200092 ~ 223367 (+)
st6galnac5a st6galnac5a,LOC107681827,LOC107708707,LOC107599846,LOC107751866 other downstream 233018 799932 ~ 828405 (+)
ccdc39 ccdc39,LOC107722234,LOC107701322,LOC107708988,LOC107568623 other downstream 830610 1397524 ~ 1408721 (+)
rc3h1b LOC107681708,LOC107560775,LOC107722144 other downstream 977859 1544773 ~ 1559774 (+)
LOC122360854 si:dkey-119f1.1,LOC107593796,LOC107715495,LOC107719281,LOC107701334,LOC107681697,LOC107593797,LOC108443183 other downstream 1336153 1903067 ~ 1910679 (+)
arl14 arl14,LOC107722413,LOC107719289 other downstream 1366598 1933512 ~ 1936759 (+)

Expression


Co-expression Network