G8479


Basic Information

Item Value
gene id G8479
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 1399408 ~ 1399728 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU12713
ATAAAACCATGGTACCATGGTACtaacaaaaaatagaaatattgtcCTGGTACCAAAACAGCCTTGACAACATGATGGTACCCAGCCCTCTTCACGTGAGGACAGCAGAGCGTGGAAACGAGCTGTGGAGTTGGGAAGACCAACCTCATCCTGCAGACGTCTTTGGTTCCTCTCCTCTTCCTGAAGCTGCTGCCTGAGTCGAAGCGCCTGACGTTCAGCCGTGCTTATATTCCTCTCCAGCTCCTTATTGTTCTCTATCTCACGCTCCATGAAGTCCTTCCTCTCCTTGAGCACATCATTCTTCTCTCTAATCACTTCATT

Function

NR:

description
uncharacterized protein LOC110529913 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12713 True 321 lncRNA 0.48 1 1399408 1399728

Neighbor

gene id symbol gene type direction distance location
eif4a2 eif4a2,LOC107568626,LOC107593804,LOC108267852,LOC105889495 coding downstream 10544 1382577 ~ 1388864 (-)
LOC122328981 NA coding downstream 14242 1385097 ~ 1385166 (-)
LOC122328955 NA coding downstream 14533 1384697 ~ 1384875 (-)
LOC122328960 NA coding downstream 15133 1384090 ~ 1384275 (-)
LOC122328985 NA coding downstream 15624 1383708 ~ 1383784 (-)
wu:fc46h12 NA coding upstream 9141 1408869 ~ 1413253 (-)
LOC122323714 LOC107715522,LOC107681815,LOC108437516,LOC108267691,LOC105889505 coding upstream 15617 1415345 ~ 1425295 (-)
ripk2 ripk2,LOC107681812,LOC107715521,LOC107722215,LOC107701343 coding upstream 28148 1427876 ~ 1440763 (-)
LOC122360826 LOC107701342,LOC107722497,LOC107701321,LOC107722488,LOC107568618,LOC107577250,LOC107578884 coding upstream 76520 1476248 ~ 1514995 (-)
zgc:110366 zgc:110366,LOC107681729,LOC107715516,LOC107578550 coding upstream 160049 1559777 ~ 1562613 (-)
G8443 NA non-coding downstream 66304 1332845 ~ 1333104 (-)
G8439 LOC107722542 non-coding downstream 89117 1309945 ~ 1310291 (-)
G8415 NA non-coding downstream 150818 1248176 ~ 1248590 (-)
G8386 NA non-coding downstream 352501 1046590 ~ 1046907 (-)
G8385 NA non-coding downstream 356458 1042745 ~ 1042950 (-)
G8489 LOC107696015,LOC107710542,LOC107721879 non-coding upstream 62332 1462060 ~ 1462514 (-)
G8599 NA non-coding upstream 440444 1840172 ~ 1876938 (-)
G8623 ppm1la,ppm1l,LOC107681725,LOC107722109,LOC107701333,LOC101065476,LOC106534897 non-coding upstream 523556 1923284 ~ 1929991 (-)
G8622 ppm1l,LOC107560765,LOC107722109,LOC107681725,LOC107701312,LOC107701333 non-coding upstream 530896 1930624 ~ 1932631 (-)
G8630 NA non-coding upstream 550463 1950191 ~ 1950400 (-)
mfsd8l2 si:ch211-38m6.6,LOC107681768,LOC107656858,LOC107565819,LOC107722537,LOC107599859,LOC108437504,LOC105026921 other downstream 61410 1331430 ~ 1337998 (-)
dipk2aa dia1a,LOC107681802,LOC107599840,LOC107722302,LOC107565821,LOC108437525,LOC108268022 other downstream 196421 1179945 ~ 1202987 (-)
LOC122325167 NA other downstream 795464 119350 ~ 603944 (-)
colgalt2a LOC107593860,LOC107681694,LOC107715500 other upstream 126020 1525748 ~ 1532557 (-)
gng5 NA other upstream 522567 1922295 ~ 1940721 (-)
slc1a7a slc1a7a,slc1a7,LOC107722044,LOC107671767,LOC107681716,LOC107593788 other upstream 616680 2016408 ~ 2038705 (-)
tmem125b tmem125b,LOC107719275,LOC107681700,LOC107681734,LOC107719290,LOC107593887 other upstream 650702 2050430 ~ 2055709 (-)
LOC122355284 NA other upstream 675570 2075298 ~ 2128540 (-)

Expression


Co-expression Network