arl14 (arl14,LOC107722413,LOC107719289)


Basic Information

Item Value
gene id arl14
gene name arl14,LOC107722413,LOC107719289
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 1933512 ~ 1936759 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU12886
GGTtctaaaatttttatttatttttttcctccccgATAGAAAAGGTCACATTGTCAGTTTCCATTTTTCCCCCTCTGTGCTTACGTTCCTTATGCAGAGAGTCACTGTTCAAACCCGCTCCCCTCTTCTGAACCGAAGAGATCAGCAACATTAAGGAACAGGCTCTTCTCTAATGGACTGAAGCCCTCAGTCACTTTATTGGTTTTAAACTCCAGTTCTTCCACAGGAATCATCGTGGTTGAGTTAAAGAGCTTCGGCTCCTCAGCAACAGATGCTGAGGTGACCTCAGCTGGGCCGGACGGCGGGAACCCAGTTGACCGGGTGCTGGTTTCTTGCTTTGATATCAGAAACAAAGGGCCTAATGTGGCAATCTTGCCCTGGTCTtTTGTTGAGTCGGTTCCTCTCTTCGACACACCACCATAGGCAAACTGCTTTGAACGCATGAGAGTTTTAAAAGGTTCCAATGACTGACCTGGTCTCACATGAAAGAaaccagccgatcttggctttGGGACCAAATAAGGCTGTTTGACAGGAGGGGCTAGTGTAACGCGGAAAGGCTGGATTAGTTCAGGCTCTGCCGCAGCTTGTAAGGATGGCTCACAGGTGTTACACACCTCATCACTTCCATCCACAGACTGCCACCTGCAACATCCACAGGGATCTTGCATAAATTGCAACCGattgatacaaaaaaataaataaataaaaatcttgataGAAGCCAGTCATTACCTTCCGTCAATAAAAGAACATGCTCGGTTCTG
>XM_043224371.1
GTTGCAACTGAGTAAGCGTTCTATAAGTCTGCCCTTACACACTCTTACTGGATCTGACGCCCAGTAGTTCAGTCGTCGTAacgtatatatatgtacgtTTGAGCTCGGTGTTGGCACGGAGTTTACGAGACACCCAACGGTCTACACTTCAAGGATTTTTCCGCACGCAAAAATGGGTCAGTGTAGTTCAAGGACAGCCGAGCAGTTTAACGAGTTTGCGTCGCTTACGACTATAAAGTTGTGTGAAAAACGCACTCCCGGCGTTTCTCAAGGAAAATGGAGAGCGGACGCCTCTCAGAACGAAGCGGCAGCGGAGAGACGGCGCCGTGGCTGCGGGACTCACGACGACTGCTCTGGACTCGTCTTTGTGGCTGATCCGACTGGTGGGGTGTGGATAGACGAAACCCTCGGGAGACAAAGGTGAACCTGCGGATGTGAACTTTTAGTCGTCGTTCTTCTTGTTTTTCCCTGAAATCCACCGTGAGGTTTCTAAAGGTGATGAAGTCAAACCAGTGCTGGACGTATCTGGAAAGACTGAGATGGGATGTCTGTGGGGcccatttaactttttttatttgtttgtttggtttccACTAACTGAAATGGAAACAGATTTATTTGAAGAGTTTTTCCAAGACATTTATGATGTCATAATGCCTGGTCACGGTCACACGTGTCATGAAGTCAGTTGATAAATGTAATGGGAAACTCATGATTGATTTCTTTAAACACACGTCTCAGGGCAACAGTCTTAACTGTAGacttgtaattatttatttcatatctaTTTATTAGTTTTGCAAAGGTTAAATTTTCAAGGTCCTATTTTATGTCAGATGACGTTCTTTAGTTTCTTTAGGATCTTTTTGAACATGTGACGTGGGAACCCATGAgattataatttagttttagcatGCGATATTTTGTTGAAACGTGTACATTAAGACATGagagaaatattaagcagaactcCGTTCCAGGCATTCTTAGCGTATCATTTGGGAGGTGTCCTGTGATACTTTGACCCATTAATCGTACAGCACTATGTAGATAAGCTAGATATAATACATCACCGAGTGACGCAGACACCATCTTAAGTAAACTTACATTTGTTGCGAGATCACAGCGAGAAGCTTTGGTGTTTGTGTACACCTGACCTACACAATGGGCCATTCAGGATCCAGACACAAACCTGAAACCCGCATCCTCCTCTTAGGGCTCGACGGAGCTGGAAAATCAACGCTTCTTTACAAACTGAAGTACAACGAGGACTTCCACACGGTTCCTACAATTGGATTCAATGTGGAAATGATCGAAGCGAAGAAGAACAGGGACAAAGTCACCCTGACCGTGTGGGACGTCGGAGGGCAGGTCAAGATGCGAGCGCACTGGAGGAATTTTTACCAGGACACGGCTGGAATTGTGTTCGTCGTTGACTCTTCTGATATTAAGCGTCTGGACGAGGCCAAGAGCGTGCTGGAACAGACCTTAAAGAGCGACCACCTCAGGGGACTCCCGGTGGTGGTTCTAGCCAACAAGCAAGATATTGTACAAGCTGCAACGGTAACCGAGATCACAGAGCAGTTTAACCTGAGAAAGAGCTGCAGTGATCGAGACTGGTTCATTCAGCCGTGTTCTGGGCTGACTGGAGCGGGGCTGGTGGACGGCTTCAGACGAATGGCACACCTGGTGAAAATGATACCCGAGGACAATAACATCAAAGAGACTGTGAAGTACATAACATCAAAATCAGTTATATCAATGAAGAAGTAGTATGCATGGCAAATTATTAAccactttttatggaaagttaTGTACACGGCGCtactacatttttatagttCATAACAGGTGTACTGGGAGAAAAACTCactactgaaaaaaatgcaaaagttatCTGGCTTataaatgaatttgaaattgAATATAGCAACCAAGATAAATCTTCGATGTCTGCGATGAAATTAATGCCCATACGAACAGCAAAAAGAATCATGTACACTGAAATGGAGGATGAATAATAGGGACCATAAAAGGGTCTAAAAAGTTacaatgattaatttaatgtatttaacatatGCTTCAAAGTACACTTTTAATGTAcagtttgtatttaaatttgttttgaaaCGTACTTGACAACCAGACTTTCAAAAAGTTATTCAAGTAATTGTGAAGTAaagggaagaagaagaaaaaaaaaaaaaaaaaaaaaaaaaaagtgccaaatgttactttaaattataattcaaaaatatttatgggTGCACATCAAAAAatgtgaaagtttttttttttttaattgcacaaaaaaaaacacttcaattgagattaattttaatgtataaacacCATTTCTGTGACCACAGCATCTGCAGTAATCGGCAAGGACCAAGATGAGAGGTtctaaaatttttatttatttttttcctccccgATAGAAAAGGTCACATTGTCAGTTTCCATTTTTCCCCCTCTGTGCTTACGTTCCTTATGCAGAGAGTCACTGTTCAAACCCGCTCCCCTCTTCTGAACCGAAGAGATCAGCAACATTAAGGAACAGGCTCTTCTCTAATGGACTGAAGCCCTCAGTCACTTTATTGGTTTTAAACTCCAGTTCTTCCACAGGAATCATCGTGGTTGAGTTAAAGAGCTTCGGCTCCTCAGCAACAGATGCTGAGGTGACCTCAGCTGGGCCGGACGGCGGGAACCCAGTTGACCGGGTGCTGGTTTCTTGCTTTGATATCAGAAACAAAGGGCCTAATGTGGCAATCTTGCCCTGGTCTGTTATAAAGAGGAGAAAAGTGTTTAAGTGCCACATTACTTGAATAAGCTGAAGAAtgagacattaaaaatgtgaaaacctTT

Function

symbol description
arl14 Predicted to enable GTP binding activity. Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human ARL14 (ADP ribosylation factor like GTPase 14).

NR:

description
PREDICTED: ADP-ribosylation factor-like protein 14

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005525 GTP binding molecular_function

KEGG:

id description
K17200 ARL14, ARF7; ADP-ribosylation factor-like protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
TU12886 False 767 lncRNA 0.46 2 1935914 1936759
XM_043224371.1 True 2868 mRNA 0.41 1 1933512 1936379

Neighbor

gene id symbol gene type direction distance location
ppm1la ppm1l,ppm1la,LOC107681725,LOC107722109,LOC107701333,LOC100694563,LOC103365160 coding upstream 882 1923052 ~ 1932630 (+)
si:dkey-119f1.1 si:dkey-119f1.1,LOC107593797,LOC107701334,LOC107722422,LOC107560764 coding upstream 31765 1880691 ~ 1901747 (+)
rgs13 LOC107715509,LOC107593894,LOC107681737,LOC107560784,LOC107722654,LOC107701324 coding upstream 56626 1874022 ~ 1876886 (+)
rgs1 LOC107681696,LOC107560781,LOC107701325,LOC107722662 coding upstream 66321 1864505 ~ 1867191 (+)
rgs18 rgs18,LOC107681733,LOC107715502,LOC107701327,LOC107560778,LOC107722673 coding upstream 78277 1848086 ~ 1855235 (+)
ipo13a si:ch73-182a11.2,LOC107593890,LOC107681711,LOC107560786,LOC107722396 coding downstream 20417 1957176 ~ 1971483 (+)
prdx1 prdx1,LOC107577377,LOC107681736,LOC107560788,LOC108267618 coding downstream 46482 1983241 ~ 1987091 (+)
zte38 zte38,LOC107681728,LOC107593889,LOC107719267,LOC107722624 coding downstream 50570 1987329 ~ 1991484 (+)
uck2b uck2b,LOC107593786,LOC107719266,LOC107681732,LOC107560789,LOC107722061 coding downstream 60679 1997438 ~ 2001435 (+)
czib si:ch211-284b7.3,c7h1orf123,cunh1orf123,LOC107681739,LOC107719286,LOC107671679,LOC107722617,LOC103022465 coding downstream 65332 2002091 ~ 2004413 (+)
LOC122362698 NA non-coding upstream 3945 1925860 ~ 1929567 (+)
G8586 NA non-coding upstream 11289 1919412 ~ 1922223 (+)
G8585 LOC107701323,LOC107593893,LOC107719279,LOC107560771,LOC107722646 non-coding upstream 14199 1918706 ~ 1919313 (+)
G8556 NA non-coding upstream 250419 1681427 ~ 1683093 (+)
G8508 NA non-coding upstream 259757 1599046 ~ 1673755 (+)
LOC122355709 LOC107593853,LOC107719278,LOC107681699 non-coding downstream 10369 1947128 ~ 1948362 (+)
G8670 tmem125b,LOC107681734,LOC107719290,LOC107593887 non-coding downstream 116552 2053311 ~ 2055730 (+)
G8691 NA non-coding downstream 233837 2170596 ~ 2170820 (+)
G8700 NA non-coding downstream 274994 2211753 ~ 2212073 (+)
G8701 NA non-coding downstream 275499 2212258 ~ 2212609 (+)
LOC122360854 si:dkey-119f1.1,LOC107593796,LOC107715495,LOC107719281,LOC107701334,LOC107681697,LOC107593797,LOC108443183 other upstream 22833 1903067 ~ 1910679 (+)
rc3h1b LOC107681708,LOC107560775,LOC107722144 other upstream 373738 1544773 ~ 1559774 (+)
ccdc39 ccdc39,LOC107722234,LOC107701322,LOC107708988,LOC107568623 other upstream 524791 1397524 ~ 1408721 (+)
st6galnac5a st6galnac5a,LOC107681827,LOC107708707,LOC107599846,LOC107751866 other upstream 1105107 799932 ~ 828405 (+)
LOC122360757 fam73b,miga2,miga1,LOC107599369,LOC107705989,LOC107675762,LOC107737175,LOC107661559,LOC107708777,LOC107681767,LOC107722319,LOC107703235,LOC107558173 other upstream 1475767 447162 ~ 457745 (+)
LOC122358138 LOC107593886,LOC107719261,LOC107671769,LOC107559363,LOC107754779,LOC107681703,LOC106568718 other downstream 242007 2178766 ~ 2191448 (+)
sgip1b sgip1b,LOC107719259,LOC107593781,LOC107709351,LOC107671695,LOC107559342,LOC107681818,LOC108430747 other downstream 333920 2270679 ~ 2288216 (+)
G8725 sec22ba,LOC107681807,LOC107727533,LOC107709355,LOC107671713,LOC107559355,LOC105891393 other downstream 462195 2398954 ~ 2401745 (+)
LOC122358652 slc35a3b,LOC107559354,LOC107593843,LOC107671667,LOC107709347 other downstream 469983 2406742 ~ 2419955 (+)
zgc:55943 zgc:55943,LOC107727521,LOC107671715,LOC107709356,LOC107559369,LOC107593773,LOC108430752 other downstream 611307 2548066 ~ 2555321 (+)

Expression


Co-expression Network