G8724


Basic Information

Item Value
gene id G8724
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 2511622 ~ 2609519 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU13085
CGCCATTTATTTGTCTTCCTCTCCGTTGACATCCTGTACAAATCAAAAGGCTCACAGGACAAGGGAAGgcaaagttaataaaataatagtctCTCCTAGAGTCGCTTaatttgtgcaaagaaaaagtCAGAGGCTGGAAAACGGACATTACCATAAAAATGAAGCAGTAACTATTTGCATAACAATAGCTGAATTCTGACATCAGTGCGAGTCTGGACAGCAGTTTGTTGAGCCTCTGCCTCTCATCAGATGAGATATTATACGTAGACATTATAATCACTGGTGGTACAATCTCAACTGAAACACATACTGTCTAAAACTGACCGTTGCATATCCGTCCATAAATGTACATCAAAAAGGGTGACAAAGCGAATGTTAAGGGTTAAATACAAGTTAAAGCTTAAGACATCATCTTGTCCCTCAGCTGATAACTCTTAAAGCAATTGCACTGTATGTAACTCTCACCcgatttcagttttgtttttctgacgCACTGAACACAGACTGTTGAGCGCAAGCTGTATTTAACCCAGAATACTCCTTTCAAGTGGTTTCGTTCCTTAACAGCTCTGCTGATTCGACTTCAAAACGTGCAAGACTCATTTTGCCGAatctaattatgtaattatcAAGCTTGTGCCCAAAGATCTTAACTGAACTCGGAAAACTAGCCCTTCAACCTAAGTTTTAGGATTTTCATTAAGAGCtctttgaaagaaaacaatcacagtgagagagaaacagggcATTGTGCGGtgataaaattacatattttctttttttttttttactgtaaaaacagatAAGTCTTTAGGATACtaagcatatattttttaaatacagtgttCAAATTTGGAATTCTGACCTTAACTAAAACAAACCATACTTCCACTCAATCATGCCTGTATAATATTGGCgtatttttctcatttgtagAATTATTAACCATGACAAAACTTCGTAATACcgacaaatctttttttatcctttttcttttttatatttagataattAGCCTTGCAGCATTGTACCCGCTGTACATAAAAGTGTGACATTTTTGTGTGCGTTTTTTCATATTCGCCCTCCTTTCCAATCAAAAACGCTTGCTACGGATGCAAAAAGAACCTTTTATGACGAACGTTTCGGTGCCAGTGTGTCGATGTGAATTCACCAACGTGAGGTCGTATTCGTGCGAAGACCTTGAGAAATCAACCTTGCcccaaaaacacacaggacttacgAGATGCCTAACAATTATATATTAcgataaaacattaaaactgaactTAAAATCGAAATGCATTAATACCACGTGCACTCGTTTTAAAACGCGACAAAGCCCTGCCAATCCGGCGTGATTCAACACGGGACGCTGGAGTTCGAATACTCGCATCCCATCGCTGACAATGACTTAAAAACCCCTCAAGTTGGAGCAGACTCGGTCACTAACGTTCTAGACATTGCTCCATTTTAACCCTTCGTGTGTGTTAGTAATACAGAGAGCGAGACCGATGGATGGTGTAAGGATTGCTTCGTTTTTGAGGTTGGGTTGCCAGTATTGGAAGACAGATGCGTGGTGCGCTGGGACGCTAATCTTCGTCGTCCTCCTCATCTTCGCTGATGGCCTGCCCTCGGGCGGCGTAGGTGTAGCCAGAGAGGGCGCTGCTGTGATGCGATGAGGGCGAGGAGGGCGGGGAGGTTTTGGTGAAGAAGGGCAAGCGGAAAGTTGGAGACGGGGAGCGCTCGCGCGTGGGACTGCTGCTGGGGCTGTGCCGCGGACTGATGGCCTGAAGCATTCGCCCTTTACCCTCCTTC

Function

GO:

id name namespace
GO:0044428 obsolete nuclear part cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13085 True 1815 lncRNA 0.42 2 2511622 2609519

Neighbor

gene id symbol gene type direction distance location
LOC122360938 LOC107593781,LOC107719259,LOC107709351,LOC107671695,LOC107559342 coding upstream 1612 2495943 ~ 2510010 (+)
LOC122360901 NA coding upstream 50400 2453850 ~ 2461222 (+)
LOC122358704 cmpk,cmpk1,LOC107719256,LOC107681787,LOC107671754,LOC107559368,LOC107709354 coding upstream 80165 2427557 ~ 2431457 (+)
LOC122358767 tsen15,LOC107735630,LOC107681748 coding upstream 120170 2390878 ~ 2391452 (+)
LOC122358683 fam78ba,LOC107593884,LOC107681754,LOC107709346,LOC107671676,LOC105891364,LOC107102035,LOC101481240 coding upstream 184179 2322711 ~ 2327443 (+)
dvl3a dvl3a,LOC107681796,LOC107671749,LOC107559372,LOC108430757 coding downstream 11323 2620842 ~ 2632556 (+)
LOC122328513 LOC107727546,LOC107671763,LOC107559376,LOC107709337 coding downstream 35476 2644995 ~ 2657785 (+)
ahsg2 LOC107727545,LOC107681805,LOC107577584,LOC107559377 coding downstream 48884 2658403 ~ 2661029 (+)
LOC122323799 LOC107681838,LOC107709342,LOC107593839,LOC108430687,LOC103043726,LOC105899208 coding downstream 85902 2695421 ~ 2701972 (+)
vps4b vps4b,LOC107710065,LOC107681797,LOC107727524,LOC107671729 coding downstream 108054 2717573 ~ 2729493 (+)
G8737 NA non-coding upstream 66422 2443588 ~ 2445200 (+)
G8716 NA non-coding upstream 190435 2288286 ~ 2321187 (+)
G8717 NA non-coding upstream 221582 2288825 ~ 2290040 (+)
G8703 NA non-coding upstream 258031 2249222 ~ 2253591 (+)
G8707 NA non-coding upstream 284371 2226905 ~ 2227251 (+)
G8764 NA non-coding downstream 3003 2612522 ~ 2613104 (+)
G8794 NA non-coding downstream 209553 2819072 ~ 2872749 (+)
G8816 NA non-coding downstream 302772 2912291 ~ 2912787 (+)
G9022 prtfdc1,LOC107711679,LOC107558005,LOC107671666,LOC104918289 non-coding downstream 507329 3116848 ~ 3121053 (+)
G9130 ipp non-coding downstream 913751 3523270 ~ 3524571 (+)
LOC122358652 slc35a3b,LOC107559354,LOC107593843,LOC107671667,LOC107709347 other upstream 91667 2406742 ~ 2419955 (+)
G8725 sec22ba,LOC107681807,LOC107727533,LOC107709355,LOC107671713,LOC107559355,LOC105891393 other upstream 109877 2398954 ~ 2401745 (+)
sgip1b sgip1b,LOC107719259,LOC107593781,LOC107709351,LOC107671695,LOC107559342,LOC107681818,LOC108430747 other upstream 223406 2270679 ~ 2288216 (+)
LOC122358138 LOC107593886,LOC107719261,LOC107671769,LOC107559363,LOC107754779,LOC107681703,LOC106568718 other upstream 320174 2178766 ~ 2191448 (+)
arl14 arl14,LOC107722413,LOC107719289 other upstream 574863 1933512 ~ 1936759 (+)
LOC122355548 NA other downstream 7688 2617207 ~ 2669943 (+)
LOC122328998 NA other downstream 8483 2618002 ~ 2618134 (+)
LOC122329004 NA other downstream 8797 2618316 ~ 2618449 (+)
G8768 zbtb41,LOC107671738,LOC107559347,LOC107709336,LOC107681803 other downstream 25722 2635241 ~ 2636586 (+)
LOC122356587 tsc22d2,LOC107727513,LOC107681775,LOC103360179,LOC107559349 other downstream 65851 2675370 ~ 2689627 (+)

Expression


Co-expression Network