G8845 (LOC107593886,LOC107719261,LOC107681703,LOC107559363,LOC107671769,LOC107754779)


Basic Information

Item Value
gene id G8845
gene name LOC107593886,LOC107719261,LOC107681703,LOC107559363,LOC107671769,LOC107754779
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 2179839 ~ 2180676 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU13244
AGCGGCAGCCATCTGCGCTATGACCTGAATGGCATTCGAATTGAAGTAGCGTCCATCTCCACCCACAACCACGGTGGAGCCCTGCCTGTCCCTCAGGTCGATGGAGGAGAAGATGCATTGAATGAAGTTGTTCAGGTAGTTCTTTTCAGATTGGAAAACGCGGGTCTTCTTCCTCAGGCCGTTGATACCGGGCCTCTGGTCAAGGTATGGAGAAGTAGGCAAAGTCAGCACTTGCAAGGGGCTATCGTTCATTGCTCCAGTCCTTTGAGGAAGAATGTAGGAGAAGCTGCTATCTCCTctcagaggagagagagagagagaaagagagtgaccGGGACGGGAGGAGAAGGAGGAAAAGCCTTGTGCCCT
>TU13245
ATGTACCTTACAATTGTGTCAAGAATGAATATCTTTTGTGGCAAATTTAGAACTAGAAAGAGGTGAGCGATAGGTCCAATAAAGCTTCTTCCCTATTTCTTGCCATCAAAATATAGGAACGCAGTacatttgaagtggattaaaacatttaagccGTCTCGGGATAACTTTGATTAATTGTTTTGATCCAATTAAATACTGGCTACTGTTTTTACCACTAAAAATACAGACAGGGGAGTGTCTATAAGATGTGTGAGATTCAGAAGCATAGACATAGATTCCTAAGAATTATTAGAGATTGTTTTACATCAAAATacttgacattttattaattctgCTTCAAAATGTGTTACTTActtattcaaattatttgtaCAAAGAAATGTAATCCTTTTTGAGTGAAAACGGTTTCTACGCTGTATTTTGTCTTATAAGAAACATATTGTAAGAATCGCAACTGTACCCCATTAGCGGCAGCCATCTGCGCTATGACCTGAATGGCATTCGAATTGAAGTAGCGTCCATCTCCACCCACAACCACGGTGGAGCCCTGCCTGTCCCTCAGGTCGATGGAGGAGAAGATGCATTGAATGAAGTTGTTCAGGTAGTTCTTTTCAGATTGGAAAACGCGGGTCTTCTTCCTCAGGCCGTTGATACCGGGCCTCTGGTCAAGGTATGGAGAAGTAGGCAAAGTCAGCACTTGCAAGGGGCTATCGTTCATTGCTCCAGTCCTTTGAGGAAGAATGTAGGAGAAGCTGCTATCTCCTctcagaggagagagagagagagaaagagagtgaccGGGACGGGAGGAGAAGGAGGAAAAGCCTTGTGCCCT

Function

NR:

description
PREDICTED: phosphoglucomutase-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13244 False 369 lncRNA 0.42 1 2179839 2180207
TU13245 True 838 lncRNA 0.41 1 2179839 2180676

Neighbor

gene id symbol gene type direction distance location
LOC122355393 LOC107681824,LOC107719263,LOC107722033,LOC107671706 coding downstream 10518 2158449 ~ 2169321 (-)
LOC122357078 cfap57 coding downstream 109312 2056567 ~ 2070527 (-)
aldh9a1b aldh9a1,aldh9a1b,LOC107681718,LOC107593789,LOC108430735 coding downstream 182932 1991585 ~ 1996907 (-)
fzr1b fzr1b,LOC107701330,LOC107719268,LOC107593790,LOC107722096 coding downstream 200641 1972019 ~ 1979198 (-)
si:ch73-344o19.1 LOC107719287,LOC107681731,LOC107722404 coding downstream 222972 1951111 ~ 1956867 (-)
LOC122358118 LOC107681770,LOC107754775,LOC107671698,LOC107559364,LOC107593785,LOC107719272 coding upstream 8834 2189510 ~ 2204382 (-)
LOC122358726 tctex1d1,LOC107709344,LOC107719283 coding upstream 280633 2461309 ~ 2465921 (-)
LOC122358747 arf1,LOC107727518,LOC103038497,LOC107671731 coding upstream 337039 2517715 ~ 2519661 (-)
sec22ba sec22ba,sec22b,LOC107681807,LOC107727533,LOC107709355,LOC107671713,LOC107559355,LOC105891393 coding upstream 363884 2544560 ~ 2548852 (-)
tsen15 tsen15,LOC107681748,LOC107735630 coding upstream 373228 2553904 ~ 2557648 (-)
G8839 NA non-coding downstream 8889 2170627 ~ 2170950 (-)
G8643 zte38,LOC107681728,LOC107593889,LOC107719267,LOC107722624 non-coding downstream 189204 1990399 ~ 1990635 (-)
G8642 NA non-coding downstream 190764 1988847 ~ 1989075 (-)
G8640 NA non-coding downstream 192769 1984109 ~ 1987070 (-)
G8630 NA non-coding downstream 229439 1950191 ~ 1950400 (-)
G8846 NA non-coding upstream 1576 2182252 ~ 2184705 (-)
G8847 NA non-coding upstream 4973 2185649 ~ 2186096 (-)
G8854 NA non-coding upstream 32096 2212772 ~ 2213053 (-)
G8856 NA non-coding upstream 34757 2215433 ~ 2215828 (-)
G8859 NA non-coding upstream 39272 2219948 ~ 2220838 (-)
LOC122355284 NA other downstream 51299 2075298 ~ 2128540 (-)
tmem125b tmem125b,LOC107719275,LOC107681700,LOC107681734,LOC107719290,LOC107593887 other downstream 124130 2050430 ~ 2055709 (-)
slc1a7a slc1a7a,slc1a7,LOC107722044,LOC107671767,LOC107681716,LOC107593788 other downstream 141134 2016408 ~ 2038705 (-)
gng5 NA other downstream 239118 1922295 ~ 1940721 (-)
colgalt2a LOC107593860,LOC107681694,LOC107715500 other downstream 647282 1525748 ~ 1532557 (-)
insl5b LOC107719258,LOC107593780 other upstream 118120 2298796 ~ 2301360 (-)
G8880 bcl6ab,LOC107593779,LOC107719257,LOC107559367,LOC107709352,LOC107681786,LOC107671762 other upstream 258685 2439361 ~ 2441713 (-)
G8913 NA other upstream 261508 2442184 ~ 2443319 (-)
G8921 LOC107719259,LOC107593781,LOC107559342,LOC107671695,LOC107709351 other upstream 296037 2476713 ~ 2502739 (-)
LOC122358781 LOC107670596,LOC107717621,LOC107758059,LOC107709348,LOC107575479,LOC107671662 other upstream 330931 2511607 ~ 2517260 (-)

Expression


Co-expression Network