G9241


Basic Information

Item Value
gene id G9241
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 3886082 ~ 3916483 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU13810
ttttttttttttttTGTGAAATAACCAGAAGTGTTTATTGGCATTACAATGGTTTTTATAGGCAAAGATAAACACAGTGAGAtcctcaaaatatatatatatatatatatatatatatcgctcTGAAAGTACaatttgtgtgttgttttttttttaaatatgaaaaaaggtGCAATAATTACCTCACACGGCAACACAATCGATTGATAAATCTACAAAAGAACGAGCTCCTCTCATTCCTCATGACACTCGCGCcaacttaacaaaaaaaagacttaaaagtTGCTTCAACTCCTGAATATCCTGTTCGACAGCGCTGCATCTGAACCAGTACCATTAATCATTTAGCAGCGGTCAAGTCCCCACGATGTAAAATGTTTGTTACGTTTGTTCTGGAATTTCTTTCTGACATAAACGGTATGAGATTAATCTCTCTTTAGAAGGAGCGAAGGTCTGGAAACCAGAGCAGCAGCTTTTTGTCCAAATTACACGCgtatgaatattttcaaaaaccaaaagaaaaacgCTTTAGGTTGTTTTCATCAGTTTGTTACtgatatgataaataaatagtagttGGCGGCAGCAAAGCAGCTACAATTCGATCACATACTGTACAGCGTTTCTTAAACATGCCCGACAACACATGAAAACACTAACCTCTTTAACAgaggtttattaaaaattatttttaaaaaaatcctaattaTGTTAGCAATAAATACAAGGGGACACCTTATATTAAGGATACAGCAGGAATCAAACGCAGCAGCTctcttcactttttttccagCGCCTTCTGCTCTAATGCCTTCTGCGCTTCTCGAGGTTTGAGAAAATACTCCGTGTACATCGAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13810 True 858 lncRNA 0.41 2 3886082 3916483

Neighbor

gene id symbol gene type direction distance location
pth1r pth1r,pth1ra,LOC107660418,LOC107671674 coding upstream 10356 3813313 ~ 3875726 (+)
usp14 usp14,LOC107660400,LOC107711695,LOC107671702,LOC107727520,LOC102778130 coding upstream 221690 3658015 ~ 3664392 (+)
LOC122362766 LOC107660396,LOC107727523,LOC402879,LOC107593822 coding upstream 295950 3585341 ~ 3590132 (+)
serbp1b serbp1b,LOC107660393,LOC107567863,LOC107671652 coding upstream 302042 3575656 ~ 3584040 (+)
zyg11l LOC107671664,LOC107574786,LOC107711672 coding upstream 323212 3550235 ~ 3562870 (+)
slc22a23 LOC107705121,LOC107660403,LOC107708605,LOC107671742,LOC107573857 coding downstream 34800 3951283 ~ 3991543 (+)
tubb2 LOC101473957,LOC100702414,LOC107660405,LOC108239677,LOC103371147 coding downstream 76908 3993391 ~ 3997726 (+)
LOC122323258 LOC107660407,LOC107671708,LOC107705103,LOC107562845 coding downstream 137541 4054024 ~ 4149787 (+)
prkacbb prkacbb,LOC107600310,LOC107705125,LOC107660409,LOC108411205,LOC103034112,LOC106599750,LOC108267323 coding downstream 243673 4160156 ~ 4171747 (+)
LOC122361024 dab1,c8b,LOC107671700,LOC107562846 coding downstream 262971 4179454 ~ 4217008 (+)
G9235 NA non-coding upstream 100787 3784917 ~ 3785295 (+)
G9234 NA non-coding upstream 101415 3784339 ~ 3784667 (+)
G9232 NA non-coding upstream 105304 3780540 ~ 3780778 (+)
G9142 LOC107579015,LOC107671680,LOC107711685 non-coding upstream 313007 3572437 ~ 3573075 (+)
G9141 NA non-coding upstream 321843 3563708 ~ 3564239 (+)
G9302 LOC107600331,LOC107705102 non-coding downstream 96623 4013106 ~ 4021316 (+)
G9304 NA non-coding downstream 98967 4015450 ~ 4060976 (+)
G9305 NA non-coding downstream 102856 4019339 ~ 4019715 (+)
G9362 NA non-coding downstream 307108 4223591 ~ 4224111 (+)
G9356 LOC107600323,LOC107671560,LOC107705133 non-coding downstream 344285 4260768 ~ 4266016 (+)
LOC122355245 crhr2,LOC107593817,LOC107660401,LOC100335005,LOC107671670 other upstream 95743 3756171 ~ 3790339 (+)
G9173 NA other upstream 207148 3676425 ~ 3678934 (+)
G9154 rock1,LOC107671690 other upstream 269039 3615482 ~ 3617043 (+)
gpr158b gpr158b,LOC107593759,LOC107711710,LOC107671743,LOC107727549 other upstream 721259 3123124 ~ 3164823 (+)
kdsr kdsr,LOC107681813,LOC107727538,LOC107671756,LOC102792240 other upstream 1146175 2729636 ~ 2739907 (+)
G9361 NA other downstream 305756 4222239 ~ 4223112 (+)
G9416 wrnip1 other downstream 647414 4563897 ~ 4570094 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other downstream 656462 4572945 ~ 4589827 (+)
LOC122361055 LOC107565287,LOC107667819 other downstream 981889 4898372 ~ 4899380 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other downstream 992646 4909129 ~ 4911176 (+)

Expression


Co-expression Network