G9305


Basic Information

Item Value
gene id G9305
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 4019339 ~ 4019715 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU13909
GTGTTGTTGCaacgttaaaaataaagtgctaaaactctaatgacagcTAGATGTGTGACTTACGTTAATGGAAAAGTCATAGCAGTCCGGTAACTCCTTATGACGCACCGTTTGAAGGTTGATAGCCTTGACTTTGAGATAGATGTTCACTGCTAACAACCTTGAAAATCTAAAGTGATGTTCATGTCTTTTTCCAAATCGCCCTCCTTGTAGAGTGAAATGGGGTAAATAGAAACGCATTCTGCAAATTCAGAAAATAATCAACAAAATATTACTATCACAAAAGCCTCTGGTTTC

Function

NR:

description
PREDICTED: sperm acrosome membrane-associated protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13909 True 297 lncRNA 0.47 2 4019339 4019715

Neighbor

gene id symbol gene type direction distance location
tubb2 LOC101473957,LOC100702414,LOC107660405,LOC108239677,LOC103371147 coding upstream 21613 3993391 ~ 3997726 (+)
slc22a23 LOC107705121,LOC107660403,LOC107708605,LOC107671742,LOC107573857 coding upstream 27796 3951283 ~ 3991543 (+)
pth1r pth1r,pth1ra,LOC107660418,LOC107671674 coding upstream 143613 3813313 ~ 3875726 (+)
usp14 usp14,LOC107660400,LOC107711695,LOC107671702,LOC107727520,LOC102778130 coding upstream 354947 3658015 ~ 3664392 (+)
LOC122362766 LOC107660396,LOC107727523,LOC402879,LOC107593822 coding upstream 429207 3585341 ~ 3590132 (+)
LOC122323258 LOC107660407,LOC107671708,LOC107705103,LOC107562845 coding downstream 34309 4054024 ~ 4149787 (+)
prkacbb prkacbb,LOC107600310,LOC107705125,LOC107660409,LOC108411205,LOC103034112,LOC106599750,LOC108267323 coding downstream 140441 4160156 ~ 4171747 (+)
LOC122361024 dab1,c8b,LOC107671700,LOC107562846 coding downstream 159739 4179454 ~ 4217008 (+)
si:ch211-188c16.1 LOC107708601,LOC107562847 coding downstream 205009 4224724 ~ 4232354 (+)
gpaa1 gpaa1,LOC107671733,LOC107693589 coding downstream 212944 4232659 ~ 4241076 (+)
G9241 NA non-coding upstream 102856 3886082 ~ 3916483 (+)
G9235 NA non-coding upstream 234044 3784917 ~ 3785295 (+)
G9234 NA non-coding upstream 234672 3784339 ~ 3784667 (+)
G9232 NA non-coding upstream 238561 3780540 ~ 3780778 (+)
G9142 LOC107579015,LOC107671680,LOC107711685 non-coding upstream 446264 3572437 ~ 3573075 (+)
G9362 NA non-coding downstream 203876 4223591 ~ 4224111 (+)
G9356 LOC107600323,LOC107671560,LOC107705133 non-coding downstream 241053 4260768 ~ 4266016 (+)
G9379 NA non-coding downstream 359861 4379576 ~ 4379832 (+)
G9382 LOC107671550,LOC107705116,LOC107671683,LOC107562856,LOC107708586,LOC107565517 non-coding downstream 367212 4386927 ~ 4387444 (+)
G9391 rpb4,polr2d,LOC106612892 non-coding downstream 439378 4459093 ~ 4462842 (+)
LOC122355245 crhr2,LOC107593817,LOC107660401,LOC100335005,LOC107671670 other upstream 229000 3756171 ~ 3790339 (+)
G9173 NA other upstream 340405 3676425 ~ 3678934 (+)
G9154 rock1,LOC107671690 other upstream 402296 3615482 ~ 3617043 (+)
gpr158b gpr158b,LOC107593759,LOC107711710,LOC107671743,LOC107727549 other upstream 854516 3123124 ~ 3164823 (+)
kdsr kdsr,LOC107681813,LOC107727538,LOC107671756,LOC102792240 other upstream 1279432 2729636 ~ 2739907 (+)
G9361 NA other downstream 202524 4222239 ~ 4223112 (+)
G9416 wrnip1 other downstream 544182 4563897 ~ 4570094 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other downstream 553230 4572945 ~ 4589827 (+)
LOC122361055 LOC107565287,LOC107667819 other downstream 878657 4898372 ~ 4899380 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other downstream 889414 4909129 ~ 4911176 (+)

Expression


Co-expression Network