G9362


Basic Information

Item Value
gene id G9362
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 4223591 ~ 4224111 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU14012
aaaaaataatttagtgtTAAAATCAGGTGTCAAAAATGAAGTAGGCTGCTCtctgacacatttttttttaagacagtCATTATTACAGTAGCTTTATTTTCCATATCTGTTAGATTATTAGAGTTTTTTTAGATGACTATAATCAGGTTAGGACTGTATTAAGTGTTTTTACCGTCCTGTCGCGGCAGGAATCACAAGCTGACCACTGCGTCCAGCTCTTGAGTTTACAGTCAATGGGAGCAGGGCTATCAACCCCTCTGGTGTGTCTTGAAGACGCATTAGCCCTGGTTTTTTGGTGATTGTATTAAGTCATCAGTAAATCTGGCCGATATATGGTGACTGAAACATGataaaacaaatccaaacgcacaaagagaaaacacaaatgtgCACATAGCTGAAATAGTTGGTTTGAGATGATCTGAGACTTCTGGGTCCAGTTTACAAATTGTTTGTC

Function

GO:

id name namespace
GO:0005579 membrane attack complex cellular_component
GO:0046930 pore complex cellular_component

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU14012 True 457 lncRNA 0.46 2 4223591 4224111

Neighbor

gene id symbol gene type direction distance location
LOC122361024 dab1,c8b,LOC107671700,LOC107562846 coding upstream 6583 4179454 ~ 4217008 (+)
prkacbb prkacbb,LOC107600310,LOC107705125,LOC107660409,LOC108411205,LOC103034112,LOC106599750,LOC108267323 coding upstream 51844 4160156 ~ 4171747 (+)
LOC122323258 LOC107660407,LOC107671708,LOC107705103,LOC107562845 coding upstream 73804 4054024 ~ 4149787 (+)
tubb2 LOC101473957,LOC100702414,LOC107660405,LOC108239677,LOC103371147 coding upstream 225865 3993391 ~ 3997726 (+)
slc22a23 LOC107705121,LOC107660403,LOC107708605,LOC107671742,LOC107573857 coding upstream 232048 3951283 ~ 3991543 (+)
si:ch211-188c16.1 LOC107708601,LOC107562847 coding downstream 613 4224724 ~ 4232354 (+)
gpaa1 gpaa1,LOC107671733,LOC107693589 coding downstream 8548 4232659 ~ 4241076 (+)
rpe65a rpe65a,rpe65,LOC107705134,LOC107708597,LOC107693590,LOC108436856 coding downstream 18997 4243108 ~ 4249001 (+)
ss18 ss18,LOC107671692,LOC107671559 coding downstream 63907 4288018 ~ 4295033 (+)
LOC122360677 znf521,LOC107562851,LOC107705137,LOC107708595,LOC107573008 coding downstream 81490 4305601 ~ 4376997 (+)
G9304 NA non-coding upstream 162615 4015450 ~ 4060976 (+)
G9302 LOC107600331,LOC107705102 non-coding upstream 202275 4013106 ~ 4021316 (+)
G9305 NA non-coding upstream 203876 4019339 ~ 4019715 (+)
G9241 NA non-coding upstream 307108 3886082 ~ 3916483 (+)
G9235 NA non-coding upstream 438296 3784917 ~ 3785295 (+)
G9356 LOC107600323,LOC107671560,LOC107705133 non-coding downstream 36657 4260768 ~ 4266016 (+)
G9379 NA non-coding downstream 155465 4379576 ~ 4379832 (+)
G9382 LOC107671550,LOC107705116,LOC107671683,LOC107562856,LOC107708586,LOC107565517 non-coding downstream 162816 4386927 ~ 4387444 (+)
G9391 rpb4,polr2d,LOC106612892 non-coding downstream 234982 4459093 ~ 4462842 (+)
G9397 NA non-coding downstream 254198 4478309 ~ 4520645 (+)
G9361 NA other upstream 479 4222239 ~ 4223112 (+)
LOC122355245 crhr2,LOC107593817,LOC107660401,LOC100335005,LOC107671670 other upstream 433252 3756171 ~ 3790339 (+)
G9173 NA other upstream 544657 3676425 ~ 3678934 (+)
G9154 rock1,LOC107671690 other upstream 606548 3615482 ~ 3617043 (+)
gpr158b gpr158b,LOC107593759,LOC107711710,LOC107671743,LOC107727549 other upstream 1058768 3123124 ~ 3164823 (+)
G9416 wrnip1 other downstream 339786 4563897 ~ 4570094 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other downstream 348834 4572945 ~ 4589827 (+)
LOC122361055 LOC107565287,LOC107667819 other downstream 674261 4898372 ~ 4899380 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other downstream 685018 4909129 ~ 4911176 (+)
G9630 LOC107705308,LOC107564255,LOC107728403 other downstream 1384216 5608327 ~ 5609276 (+)

Expression


Co-expression Network