G9379


Basic Information

Item Value
gene id G9379
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 4379576 ~ 4379832 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU14036
AAAGCAGCTCTTCCACCCAAGTCCCCAAATGCTCACTTTAGTTAATGATGAACAGTTTATTGTTAAAGCAGCGTATTGTTCATGACAAACAGCACTCCTGAACCTCTCCGTTCTGTTTGTTATCGTTGgggtgttttctttttattccgCTTTCTGTcgaagaaagaaaaggaaacttaattaaactgaacaaaatggaGCGGCATCTTTCCAAACTCTCATGTCATTAAAATGGAGATGAGTATAAAAGAACAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14036 True 257 lncRNA 0.39 1 4379576 4379832

Neighbor

gene id symbol gene type direction distance location
LOC122360677 znf521,LOC107562851,LOC107705137,LOC107708595,LOC107573008 coding upstream 2579 4305601 ~ 4376997 (+)
ss18 ss18,LOC107671692,LOC107671559 coding upstream 84543 4288018 ~ 4295033 (+)
rpe65a rpe65a,rpe65,LOC107705134,LOC107708597,LOC107693590,LOC108436856 coding upstream 130575 4243108 ~ 4249001 (+)
gpaa1 gpaa1,LOC107671733,LOC107693589 coding upstream 138500 4232659 ~ 4241076 (+)
si:ch211-188c16.1 LOC107708601,LOC107562847 coding upstream 147222 4224724 ~ 4232354 (+)
LOC122323876 LOC107565530 coding downstream 23949 4403781 ~ 4415800 (+)
LOC122323886 LOC107671547,LOC107565518 coding downstream 36092 4415924 ~ 4422167 (+)
LOC122323895 LOC107565531,LOC107708594,LOC107671745,LOC100331149,LOC108436854 coding downstream 43545 4423377 ~ 4432719 (+)
si:ch211-241e1.3 LOC107671555,LOC107705144,LOC107708592,LOC107565521,LOC107671659 coding downstream 160220 4540052 ~ 4549603 (+)
LOC122328338 foxq1,LOC107685281,LOC107745888,LOC107563088,LOC107671726,LOC107724052 coding downstream 504778 4884610 ~ 4885965 (+)
G9356 LOC107600323,LOC107671560,LOC107705133 non-coding upstream 113560 4260768 ~ 4266016 (+)
G9362 NA non-coding upstream 155465 4223591 ~ 4224111 (+)
G9304 NA non-coding upstream 318600 4015450 ~ 4060976 (+)
G9302 LOC107600331,LOC107705102 non-coding upstream 358260 4013106 ~ 4021316 (+)
G9305 NA non-coding upstream 359861 4019339 ~ 4019715 (+)
G9382 LOC107671550,LOC107705116,LOC107671683,LOC107562856,LOC107708586,LOC107565517 non-coding downstream 7095 4386927 ~ 4387444 (+)
G9391 rpb4,polr2d,LOC106612892 non-coding downstream 79261 4459093 ~ 4462842 (+)
G9397 NA non-coding downstream 98477 4478309 ~ 4520645 (+)
G9398 NA non-coding downstream 99645 4479477 ~ 4482624 (+)
G9516 NA non-coding downstream 244930 4624762 ~ 4627170 (+)
G9361 NA other upstream 156464 4222239 ~ 4223112 (+)
LOC122355245 crhr2,LOC107593817,LOC107660401,LOC100335005,LOC107671670 other upstream 589237 3756171 ~ 3790339 (+)
G9173 NA other upstream 700642 3676425 ~ 3678934 (+)
G9154 rock1,LOC107671690 other upstream 762533 3615482 ~ 3617043 (+)
gpr158b gpr158b,LOC107593759,LOC107711710,LOC107671743,LOC107727549 other upstream 1214753 3123124 ~ 3164823 (+)
G9416 wrnip1 other downstream 184065 4563897 ~ 4570094 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other downstream 193113 4572945 ~ 4589827 (+)
LOC122361055 LOC107565287,LOC107667819 other downstream 518540 4898372 ~ 4899380 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other downstream 529297 4909129 ~ 4911176 (+)
G9630 LOC107705308,LOC107564255,LOC107728403 other downstream 1228495 5608327 ~ 5609276 (+)

Expression


Co-expression Network