G9397


Basic Information

Item Value
gene id G9397
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 4478309 ~ 4520645 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU14059
TTCAAGATGCATTCCAGGGAGAAGAGCACAGTGAAGGCTGTGTTGAGGTGCTTCAGGACGATGTCGTAGGCAGTTGGCGCTGAGTGGTACTGAAAAGCATTACGATTATAAATCACAAATGCTGTGCGCACCTCAAAATATCTCACTTAAGCTATTTCAGCTGAAGATGAAGACCATGAAAACCAAGAGCAGATAcatacagtcatggccaaaaatacCGGCATCCTTGGTTAacatgatcaaagaaggctgtgaaaattagTCTGTATCGTTAAtacttttgatcttttattaaaaaaaaaacaaaacaaaaatctaacctttaTTGGATAATGAGAGTTTAAAACGGGgagaaatatcattatgaaataaatatttttctctaaTACACATTTGCCATAATTTATGGCACCCTTTTATTGAATACTTcttgaaacctttatttttaacagctcTAAATGGTCTCCTATAAATGTCTGATGAGGTTAGAGAACACCTGACAAGAGACCAGAGACCAttccttcatccagaatcactcctcactcattttctacagggtttGTTTTTGGACGAGAGAATTTTTCTTGAAACCCTCCAaacaacatgtggtgatgtaGGCTCTGCACTTTTTTGACCCTGAGACTCAAATCTGCAATTCTCCAGCTGTGGTCACTGGATAGTTTTTATCCACTCAAACCTTCCTTTTCACTGTGCATTAGGACAATATAGACACACATCCTCTTCTAGGCAGTTTCATAACATTTTACGTTAATTGGAAATTTGCCTGATGGTGGAAATGGTAATTTTCACTGCTCCAGCTCTTTTCTTAAAGCTACTTTACTAATTTGTGCATTGTGATTGATGATTAAGGTAATTTGGGCTctgttttccctcctatttATAACTAAGTGAAACAGGAAATCATGGCCAGATAATTCCATGTTCATAATCACCCTGGAGTGCTCAAAATTGTGAATATGCATGGGAATATACTGCAGAGATTTTTTATTCCTAAGAAtttctaggggtgccaataattgtgtccaacgtgtataaaaaaaaataaataaataaataaataacgcacAATAAAACATGTAATACGGCATTCATTGAAATGCTGCATTTTGG

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034220 ion transmembrane transport biological_process
GO:0098655 cation transmembrane transport biological_process
GO:0098660 inorganic ion transmembrane transport biological_process
GO:0098662 inorganic cation transmembrane transport biological_process
GO:0055085 transmembrane transport biological_process
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006812 cation transport biological_process
GO:0006813 potassium ion transport biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU14059 True 1131 lncRNA 0.32 2 4478309 4520645

Neighbor

gene id symbol gene type direction distance location
LOC122323895 LOC107565531,LOC107708594,LOC107671745,LOC100331149,LOC108436854 coding upstream 45590 4423377 ~ 4432719 (+)
LOC122323886 LOC107671547,LOC107565518 coding upstream 56142 4415924 ~ 4422167 (+)
LOC122323876 LOC107565530 coding upstream 62509 4403781 ~ 4415800 (+)
LOC122360677 znf521,LOC107562851,LOC107705137,LOC107708595,LOC107573008 coding upstream 101312 4305601 ~ 4376997 (+)
ss18 ss18,LOC107671692,LOC107671559 coding upstream 183276 4288018 ~ 4295033 (+)
si:ch211-241e1.3 LOC107671555,LOC107705144,LOC107708592,LOC107565521,LOC107671659 coding downstream 19407 4540052 ~ 4549603 (+)
LOC122328338 foxq1,LOC107685281,LOC107745888,LOC107563088,LOC107671726,LOC107724052 coding downstream 363965 4884610 ~ 4885965 (+)
foxf2a LOC107671725,LOC107745889,LOC107563086,LOC107685282,LOC107724048 coding downstream 367478 4888123 ~ 4891761 (+)
pex5lb pex5lb,LOC107564246,LOC107653517,LOC107660316,LOC107550448,LOC107724753 coding downstream 1209960 5730605 ~ 5763859 (+)
gnb4a LOC107705311,LOC107653516,LOC107564248,LOC108440866,LOC107724752,LOC107660315,LOC103030165,LOC107550449 coding downstream 1244423 5765068 ~ 5779593 (+)
G9391 rpb4,polr2d,LOC106612892 non-coding upstream 15467 4459093 ~ 4462842 (+)
G9382 LOC107671550,LOC107705116,LOC107671683,LOC107562856,LOC107708586,LOC107565517 non-coding upstream 90865 4386927 ~ 4387444 (+)
G9379 NA non-coding upstream 98477 4379576 ~ 4379832 (+)
G9356 LOC107600323,LOC107671560,LOC107705133 non-coding upstream 212293 4260768 ~ 4266016 (+)
G9362 NA non-coding upstream 254198 4223591 ~ 4224111 (+)
G9516 NA non-coding downstream 104117 4624762 ~ 4627170 (+)
G9536 NA non-coding downstream 133311 4653956 ~ 4654170 (+)
G9550 NA non-coding downstream 266401 4787046 ~ 4787369 (+)
G9568 NA non-coding downstream 392350 4912995 ~ 4913362 (+)
G9596 crhr2,LOC107660401,LOC107593817,LOC107671670,LOC100335005 non-coding downstream 554204 5074849 ~ 5111570 (+)
G9361 NA other upstream 255197 4222239 ~ 4223112 (+)
LOC122355245 crhr2,LOC107593817,LOC107660401,LOC100335005,LOC107671670 other upstream 687970 3756171 ~ 3790339 (+)
G9173 NA other upstream 799375 3676425 ~ 3678934 (+)
G9154 rock1,LOC107671690 other upstream 861266 3615482 ~ 3617043 (+)
gpr158b gpr158b,LOC107593759,LOC107711710,LOC107671743,LOC107727549 other upstream 1313486 3123124 ~ 3164823 (+)
G9416 wrnip1 other downstream 43252 4563897 ~ 4570094 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other downstream 52300 4572945 ~ 4589827 (+)
LOC122361055 LOC107565287,LOC107667819 other downstream 377727 4898372 ~ 4899380 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other downstream 388484 4909129 ~ 4911176 (+)
G9630 LOC107705308,LOC107564255,LOC107728403 other downstream 1087682 5608327 ~ 5609276 (+)

Expression


Co-expression Network