G9550


Basic Information

Item Value
gene id G9550
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 4787046 ~ 4787369 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU14252
TCGTGTGTTTCCTGGCTTTTGTTAAGTCCAGGGTATTGGttgattttcacttttataaagCTATGTACGATCTGGTGACTTTTGAACAAATCTGGTGCATTCATGGGGCTTTGTGCACTTTGTCTGAAGATGCTctagtgttttgtttgtaggtttgttgtgtactgttttttgtcttggtaattgttattgtggtttgtaataaaatttttttgcaaaatcaaaaatctctgtctctctctctctctctctctctctctctctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14252 True 273 lncRNA 0.37 2 4787046 4787369

Neighbor

gene id symbol gene type direction distance location
si:ch211-241e1.3 LOC107671555,LOC107705144,LOC107708592,LOC107565521,LOC107671659 coding upstream 237443 4540052 ~ 4549603 (+)
LOC122323895 LOC107565531,LOC107708594,LOC107671745,LOC100331149,LOC108436854 coding upstream 354327 4423377 ~ 4432719 (+)
LOC122323886 LOC107671547,LOC107565518 coding upstream 364879 4415924 ~ 4422167 (+)
LOC122323876 LOC107565530 coding upstream 371246 4403781 ~ 4415800 (+)
LOC122360677 znf521,LOC107562851,LOC107705137,LOC107708595,LOC107573008 coding upstream 410049 4305601 ~ 4376997 (+)
LOC122328338 foxq1,LOC107685281,LOC107745888,LOC107563088,LOC107671726,LOC107724052 coding downstream 97241 4884610 ~ 4885965 (+)
foxf2a LOC107671725,LOC107745889,LOC107563086,LOC107685282,LOC107724048 coding downstream 100754 4888123 ~ 4891761 (+)
pex5lb pex5lb,LOC107564246,LOC107653517,LOC107660316,LOC107550448,LOC107724753 coding downstream 943236 5730605 ~ 5763859 (+)
gnb4a LOC107705311,LOC107653516,LOC107564248,LOC108440866,LOC107724752,LOC107660315,LOC103030165,LOC107550449 coding downstream 977699 5765068 ~ 5779593 (+)
si:ch1073-184j22.1 si:ch1073-184j22.1,LOC107564249,LOC107653514,LOC107705312,LOC107660327,LOC107550431,LOC107724751,LOC108440865 coding downstream 1006857 5794226 ~ 5800871 (+)
G9536 NA non-coding upstream 132876 4653956 ~ 4654170 (+)
G9516 NA non-coding upstream 159876 4624762 ~ 4627170 (+)
G9397 NA non-coding upstream 266401 4478309 ~ 4520645 (+)
G9398 NA non-coding upstream 304422 4479477 ~ 4482624 (+)
G9391 rpb4,polr2d,LOC106612892 non-coding upstream 324204 4459093 ~ 4462842 (+)
G9568 NA non-coding downstream 125626 4912995 ~ 4913362 (+)
G9596 crhr2,LOC107660401,LOC107593817,LOC107671670,LOC100335005 non-coding downstream 287480 5074849 ~ 5111570 (+)
G9613 NA non-coding downstream 656165 5443534 ~ 5537567 (+)
G9632 tfr1a,LOC107705306,LOC107653522,LOC107564243,LOC107728405 non-coding downstream 790097 5577466 ~ 5591587 (+)
LOC122357632 NA non-coding downstream 817105 5604474 ~ 5607425 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other upstream 197219 4572945 ~ 4589827 (+)
G9416 wrnip1 other upstream 216952 4563897 ~ 4570094 (+)
G9361 NA other upstream 563934 4222239 ~ 4223112 (+)
LOC122355245 crhr2,LOC107593817,LOC107660401,LOC100335005,LOC107671670 other upstream 996707 3756171 ~ 3790339 (+)
G9173 NA other upstream 1108112 3676425 ~ 3678934 (+)
LOC122361055 LOC107565287,LOC107667819 other downstream 111003 4898372 ~ 4899380 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other downstream 121760 4909129 ~ 4911176 (+)
G9630 LOC107705308,LOC107564255,LOC107728403 other downstream 820958 5608327 ~ 5609276 (+)
dusp28 dusp28,LOC107737412,LOC107695162,LOC107653509,LOC107705300,LOC107564257 other downstream 1036624 5823993 ~ 5826286 (+)
trnag-gcc_20 NA other downstream 1433057 6220426 ~ 6220500 (+)

Expression


Co-expression Network