G9596 (crhr2,LOC107660401,LOC107593817,LOC107671670,LOC100335005)


Basic Information

Item Value
gene id G9596
gene name crhr2,LOC107660401,LOC107593817,LOC107671670,LOC100335005
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 5074849 ~ 5111570 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU14327
TCGCGTCGATGAGCGTCGACGGTGGGGATTACCTCTAGCGTTAACGCGTTGCTTTTATTCGGCTCTTGTAATGCACATTTATCAACAGCGCTTGTATTTTCTTCTAAGGTCTCTACTGTAACGCCACCACGGATGAAATCGGAACTTGCTGGCCGAGAAGCAACTCTGGACGGATAATTGAGCGACCCTGTCCAGAGTACATCAACGGCGTCAAATACAACACCACTAGAATTGCATACAGAGAGTGTCTGGACAATGGCACGTGGGCGCTGAAAAGTAACTACTCCAACTGTGAGCCCATTTTAGAGGAAAAGagGAAGTACCCCATGCACTACAAGATAGCCCTTATCATCAACTACTTGGCCACTGTATATCAGTCGGAGCTCTCGTTATCGCCTTCATTCTCTTTCTGTGCTTGAGGAGCATCCGATGCCTTCGCAACATAATCCACTGGAACTTAATTACGACTTTCATTTTGAGGAATGTAATGTGGTTTTTGCTTCAGCTGATTGACGAAAACATTTATGAGACGAATGAGCCCTGGTGTCGTCTTATTACAACAATCTATAATTACTTTGTGGTGACCAATTTTTTCTGGATGTTTGTCGAGGGCTGCTATCTTCACACGGCTATTGTGATGACATATTCCACGGACAAGCTTCGAAAATGGGTCTTCCTCTTCATTGGATGGTGTATACCGTGTCCGATAATTATAGCGTGGGCCATTGGAAAACTTTACAATGAAAACGAACAATGCTGGTTTGGCAAGGAACCTGGAAAGTACATAGACTACATT

Function

symbol description
crhr2 Human ortholog(s) of this gene implicated in asthma. Orthologous to human CRHR2 (corticotropin releasing hormone receptor 2).

NR:

description
PREDICTED: corticotropin-releasing factor receptor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14327 True 796 lncRNA 0.52 7 5074849 5111570

Neighbor

gene id symbol gene type direction distance location
foxf2a LOC107671725,LOC107745889,LOC107563086,LOC107685282,LOC107724048 coding upstream 183088 4888123 ~ 4891761 (+)
LOC122328338 foxq1,LOC107685281,LOC107745888,LOC107563088,LOC107671726,LOC107724052 coding upstream 188884 4884610 ~ 4885965 (+)
si:ch211-241e1.3 LOC107671555,LOC107705144,LOC107708592,LOC107565521,LOC107671659 coding upstream 525246 4540052 ~ 4549603 (+)
LOC122323895 LOC107565531,LOC107708594,LOC107671745,LOC100331149,LOC108436854 coding upstream 642130 4423377 ~ 4432719 (+)
LOC122323886 LOC107671547,LOC107565518 coding upstream 652682 4415924 ~ 4422167 (+)
pex5lb pex5lb,LOC107564246,LOC107653517,LOC107660316,LOC107550448,LOC107724753 coding downstream 619035 5730605 ~ 5763859 (+)
gnb4a LOC107705311,LOC107653516,LOC107564248,LOC108440866,LOC107724752,LOC107660315,LOC103030165,LOC107550449 coding downstream 653498 5765068 ~ 5779593 (+)
si:ch1073-184j22.1 si:ch1073-184j22.1,LOC107564249,LOC107653514,LOC107705312,LOC107660327,LOC107550431,LOC107724751,LOC108440865 coding downstream 682656 5794226 ~ 5800871 (+)
sft2d3 sft2d3,LOC107705299,LOC107653510,LOC107737414 coding downstream 695601 5807171 ~ 5808548 (+)
LOC122361161 NA coding downstream 725078 5836648 ~ 5838633 (+)
G9568 NA non-coding upstream 161487 4912995 ~ 4913362 (+)
G9550 NA non-coding upstream 287480 4787046 ~ 4787369 (+)
G9536 NA non-coding upstream 420679 4653956 ~ 4654170 (+)
G9516 NA non-coding upstream 447679 4624762 ~ 4627170 (+)
G9397 NA non-coding upstream 554204 4478309 ~ 4520645 (+)
G9613 NA non-coding downstream 331964 5443534 ~ 5537567 (+)
G9632 tfr1a,LOC107705306,LOC107653522,LOC107564243,LOC107728405 non-coding downstream 465896 5577466 ~ 5591587 (+)
LOC122357632 NA non-coding downstream 492904 5604474 ~ 5607425 (+)
G9660 NA non-coding downstream 591047 5702617 ~ 5705885 (+)
G9663 NA non-coding downstream 605608 5717178 ~ 5717406 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other upstream 163673 4909129 ~ 4911176 (+)
LOC122361055 LOC107565287,LOC107667819 other upstream 175469 4898372 ~ 4899380 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other upstream 485022 4572945 ~ 4589827 (+)
G9416 wrnip1 other upstream 504755 4563897 ~ 4570094 (+)
G9361 NA other upstream 851737 4222239 ~ 4223112 (+)
G9630 LOC107705308,LOC107564255,LOC107728403 other downstream 496757 5608327 ~ 5609276 (+)
dusp28 dusp28,LOC107737412,LOC107695162,LOC107653509,LOC107705300,LOC107564257 other downstream 712423 5823993 ~ 5826286 (+)
trnag-gcc_20 NA other downstream 1108856 6220426 ~ 6220500 (+)
trnag-gcc_21 NA other downstream 1110875 6222445 ~ 6222519 (+)
sst2 LOC107549725,LOC107710806 other downstream 1255607 6367177 ~ 6367954 (+)

Expression


Co-expression Network