dusp28 (dusp28,LOC107737412,LOC107695162,LOC107653509,LOC107705300,LOC107564257)


Basic Information

Item Value
gene id dusp28
gene name dusp28,LOC107737412,LOC107695162,LOC107653509,LOC107705300,LOC107564257
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 5823993 ~ 5826286 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU14467
ATTTCAGCTTACTCTTGTGTACTTACTTTCACCTCATTCTGAACACATGTGATCATTTCTTCAgttaacataaaatgaaaactgagaCAATTTAATTGACATACCTTGACgaactttttctttaaattttaaatacataactgTCCATTAGGTGGGGCTATGGTTCGATTGCCATAAATAAACGGAAGcGACAAAACGTCAGCATAGACATCAAATCTAGATTGGCTCAACTGTATGTCAAGCTTGGGTTTCAAGTAACAGAGCTATTTTAAATCTACACTGGTTACTGAAGGAGAGGAAAGCGAATATTGGTATAAATGGGCGGGGTAAATTAGCTGCATGTGCGTTCACTTCACGTTTTTCCTGTCATTGGGACTGTTGTGGCGAACAGGATGAGGAAGGTCTGACACATCCGCTTCGAGGATCATCCCCATGCCTAATCTGCAGCTCACAAGACTTTTCTGTCAACCTTTTCCCTCTATGCGGGTAAGCACTTTGCGTGTACCTGTATATGATGACCCTCAAGAAGACCTATACAAGTATTTTGACCACTGTGCTGATGCCATAGCCAGTGAGGCAGAAAGGGGAGGCCGCACTGTTGTGTATTGCAAGAATGGACGGAGTCGCTCAGCTACTGTCTGTGTGGCCTATTTAATGAAGCATCAGGGTCTCACCTTGACAGATGCCTTCCAGGTAGTAAAAAGTGCCAGATCAGTAGTTGAGCCTAACCCTGGATTCTGGACTCAGCTGGAGCGATATGAACAGGAGCTGAAGATCAGGAAATCGTCCAGCCACAGATGTAACCTCTCTCCACTTTGACTTCATACCAACATTTTCTGATATGACAATCTCAACAAAATCTTCAGGAGTTTTATAATAGCTAAGGCTTTAGACATGTCGCTGTTCAAGctttcttcaaataaaaaatgccatataataacaataataatgatacgTGCCTTGAATGATTAtaaagtgctttgatgcaacctgtgttgttaaaagcactatataaataaaaatgattgattgattgataaagtGTGATAacgattatattatattttaaaaagaaaaaggagtatgtgtatatatatatatatatatatatatatatatata
>XM_043223461.1
GTTCGATTGCCATAAATAAACGGAAGGTGAGATTTGAATAATTTCATACCTCTCCAGACACTTTTGCCaacaaattgtaaataaattatcCAACTGAGTTATTTGGACTACAAAGgtcaaactgtttttgttttccagcGACAAAACGTCAGCATAGACATCAAATCTAGATTGGCTCAACTGTATGTCAAGCTTGGGTTTCAAGTAACAGAGCTATTTTAAATCTACACTGGTTACTGAAGGAGAGGAAAGCGAATATTGGTATAAATGGGCGGGGTAAATTAGCTGCATGTGCGTTCACTTCACGTTTTTCCTGTCATTGGGACTGTTGTGGCGAACAGGATGAGGAAGGTCTGACACATCCGCTTCGAGGATCATCCCCATGCCTAATCTGCAGCTCACAAGACTTTTCTGTGTAAGGGCATTAAGATGTGGTTGAGACATCTGACCATTCTCCTTGTTGATGACgtataaatcataatttagtATTCGATCTGCTGTATGCATCTACCTCTTTTGAAATAACACTTGTATCTACAGAACCTAAATGAAATGActatatattaattaacatatatattaagaaaattcAGGACCCAGTGGACCAGTGATTATAATGACTATTTAATAGGTCTGATGTTCCTTTAAACATATAGtcaaatatatgcaataatacAGTTAGAGATGCTGCAGTTAAGCTCAGTTGCAGACTGTCTGCTGATCAGTAATGCCCGGTCAGCCTGTAGCAATGAACTTATCCAGAAGGAGGAGGTCACTCTTTGTATTAATGTTTCTAAGCAGCAACCTTTTCCCTCTATGCGGGTAAGCACTTTGCGTGTACCTGTATATGATGACCCTCAAGAAGACCTATACAAGTATTTTGACCACTGTGCTGATGCCATAGCCAGTGAGGCAGAAAGGGGAGGCCGCACTGTTGTGTATTGCAAGAATGGACGGAGTCGCTCAGCTACTGTCTGTGTGGCCTATTTAATGAAGCATCAGGGTCTCACCTTGACAGATGCCTTCCAGGTAGTAAAAAGTGCCAGATCAGTAGTTGAGCCTAACCCTGGATTCTGGACTCAGCTGGAGCGATATGAACAGGAGCTGAAGATCAGGAAATCGTCCAGCCACAGATGTAACCTCTCTCCACTTTGACTTCATACCAACATTTTCTGATATGACAATCTCAACAAAATCTTCAGGAGTTTTATAATAGCTAAGGCTTTAGACATGTCGCTGTTCAAGctttcttcaaataaaaaatgccatataataacaataataatgatacgTGCCTTGAATGATTAtaaagtgctttgatgcaacctgtgttgttaaaagcactatataaataaaaatgattgattgattgataaagtGTGATAacgattatattatattttaaaaagaaaaaggagtatg
>XM_043223472.1
GTTCGATTGCCATAAATAAACGGAAGGTGAGATTTGAATAATTTCATACCTCTCCAGACACTTTTGCCaacaaattgtaaataaattatcCAACTGAGTTATTTGGACTACAAAGgtcaaactgtttttgttttccagcGACAAAACGTCAGCATAGACATCAAATCTAGATTGGCTCAACTGTATGTCAAGCTTGGGTTTCAAGTAACAGAGCTATTTTAAATCTACACTGGTTACTGAAGGAGAGGAAAGCGAATATTGGTATAAATGGGCGGGGTAAATTAGCTGCATGTGCGTTCACTTCACGTTTTTCCTGTCATTGGGACTGTTGTGGCGAACAGGATGAGGAAGGTCTGACACATCCGCTTCGAGGATCATCCCCATGCCTAATCTGCAGGTCAGAATGGTTTCTTAATCTGAGCTCAATGTTTATGTAGTGTTTTGAAGAAGGCTGGATGGCTAAGCATATCCGCGCTGTTAAACCTAGTGTTGGAGCATGCTCCGTGAACAAATTCAGCACTTTACTGTACATTCTGTTTActgtacaaatgtttttttcccttttattgtttttccttttattatttacgTTGTATGTGACTTTTTGCAGTGActttgtatgtgtttgttctCTCCTCTCTTATTTAATCAACAGCTCACAAGACTTTTCTGTGTAAGGGCATTAAGATGTGGTTGAGACATCTGACCATTCTCCTTGTTGATGACgtataaatcataatttagtATTCGATCTGCTGTATGCATCTACCTCTTTTGAAATAACACTTGTATCTACAGAACCTAAATGAAATGActatatattaattaacatatatattaagaaaattcAGGACCCAGTGGACCAGTGATTATAATGACTATTTAATAGGTCTGATGTTCCTTTAAACATATAGtcaaatatatgcaataatacAGTTAGAGATGCTGCAGTTAAGCTCAGTTGCAGACTGTCTGCTGATCAGTAATGCCCGGTCAGCCTGTAGCAATGAACTTATCCAGAAGGAGGAGGTCACTCTTTGTATTAATGTTTCTAAGCAGCAACCTTTTCCCTCTATGCGGGTAAGCACTTTGCGTGTACCTGTATATGATGACCCTCAAGAAGACCTATACAAGTATTTTGACCACTGTGCTGATGCCATAGCCAGTGAGGCAGAAAGGGGAGGCCGCACTGTTGTGTATTGCAAGAATGGACGGAGTCGCTCAGCTACTGTCTGTGTGGCCTATTTAATGAAGCATCAGGGTCTCACCTTGACAGATGCCTTCCAGGTAGTAAAAAGTGCCAGATCAGTAGTTGAGCCTAACCCTGGATTCTGGACTCAGCTGGAGCGATATGAACAGGAGCTGAAGATCAGGAAATCGTCCAGCCACAGATGTAACCTCTCTCCACTTTGACTTCATACCAACATTTTCTGATATGACAATCTCAACAAAATCTTCAGGAGTTTTATAATAGCTAAGGCTTTAGACATGTCGCTGTTCAAGctttcttcaaataaaaaatgccatataataacaataataatgatacgTGCCTTGAATGATTAtaaagtgctttgatgcaacctgtgttgttaaaagcactatataaataaaaatgattgattgattgataaagtGTGATAacgattatattatattttaaaaagaaaaaggagtatg
>XM_043223481.1
ATGGTTCGATTGCCATAAATAAACGGAAGGTGAGATTTGAATAATTTCATACCTCTCCAGACACTTTTGCCaacaaattgtaaataaattatcCAACTGAGTTATTTGGACTACAAAGgtcaaactgtttttgttttccagcGACAAAACGTCAGCATAGACATCAAATCTAGATTGGCTCAACTGTATGTCAAGCTTGGGTTTCAAGTAACAGAGCTATTTTAAATCTACACTGGTTACTGAAGGAGAGGAAAGCGAATATTGGTATAAATGGGCGGGGTAAATTAGCTGCATGTGCGTTCACTTCACGTTTTTCCTGTCATTGGGACTGTTGTGGCGAACAGGATGAGGAAGGTCTGACACATCCGCTTCGAGGATCATCCCCATGCCTAATCTGCAGCTCACAAGACTTTTCTGTCAGCAACCTTTTCCCTCTATGCGGGTAAGCACTTTGCGTGTACCTGTATATGATGACCCTCAAGAAGACCTATACAAGTATTTTGACCACTGTGCTGATGCCATAGCCAGTGAGGCAGAAAGGGGAGGCCGCACTGTTGTGTATTGCAAGAATGGACGGAGTCGCTCAGCTACTGTCTGTGTGGCCTATTTAATGAAGCATCAGGGTCTCACCTTGACAGATGCCTTCCAGGTAGTAAAAAGTGCCAGATCAGTAGTTGAGCCTAACCCTGGATTCTGGACTCAGCTGGAGCGATATGAACAGGAGCTGAAGATCAGGAAATCGTCCAGCCACAGATGTAACCTCTCTCCACTTTGACTTCATACCAACATTTTCTGATATGACAATCTCAACAAAATCTTCAGGAGTTTTATAATAGCTAAGGCTTTAGACATGTCGCTGTTCAAGctttcttcaaataaaaaatgccatataataacaataataatgatacgTGCCTTGAATGATTAtaaagtgctttgatgcaacctgtgttgttaaaagcactatataaataaaaatgattgattgattgataaagtGTGATAacgattatattatattttaaaaagaaaaaggagtatg
>XM_043223488.1
GGTTCGATTGCCATAAATAAACGGAAGGTGAGATTTGAATAATTTCATACCTCTCCAGACACTTTTGCCaacaaattgtaaataaattatcCAACTGAGTTATTTGGACTACAAAGgtcaaactgtttttgttttccagcGACAAAACGTCAGCATAGACATCAAATCTAGATTGGCTCAACTGTATGTCAAGCTTGGGTTTCAAGTAACAGAGCTATTTTAAATCTACACTGGTTACTGAAGGAGAGGAAAGCGAATATTGGTATAAATGGGCGGGGTAAATTAGCTGCATGTGCGTTCACTTCACGTTTTTCCTGTCATTGGGACTGTTGTGGCGAACAGGATGAGGAAGGTCTGACACATCCGCTTCGAGGATCATCCCCATGCCTAATCTGCAGCTCACAAGACTTTTCTGTCAACCTTTTCCCTCTATGCGGGTAAGCACTTTGCGTGTACCTGTATATGATGACCCTCAAGAAGACCTATACAAGTATTTTGACCACTGTGCTGATGCCATAGCCAGTGAGGCAGAAAGGGGAGGCCGCACTGTTGTGTATTGCAAGAATGGACGGAGTCGCTCAGCTACTGTCTGTGTGGCCTATTTAATGAAGCATCAGGGTCTCACCTTGACAGATGCCTTCCAGGTAGTAAAAAGTGCCAGATCAGTAGTTGAGCCTAACCCTGGATTCTGGACTCAGCTGGAGCGATATGAACAGGAGCTGAAGATCAGGAAATCGTCCAGCCACAGATGTAACCTCTCTCCACTTTGACTTCATACCAACATTTTCTGATATGACAATCTCAACAAAATCTTCAGGAGTTTTATAATAGCTAAGGCTTTAGACATGTCGCTGTTCAAGctttcttcaaataaaaaatgccatataataacaataataatgatacgTGCCTTGAATGATTAtaaagtgctttgatgcaacctgtgttgttaaaagcactatataaataaaaatgattgattgattgataaagtGTGATAacgattatattatattttaaaaagaaaaaggagtatg
>XM_043223496.1
GGTTCGATTGCCATAAATAAACGGAAGGTGAGATTTGAATAATTTCATACCTCTCCAGACACTTTTGCCaacaaattgtaaataaattatcCAACTGAGTTATTTGGACTACAAAGgtcaaactgtttttgttttccagcGACAAAACGTCAGCATAGACATCAAATCTAGATTGGCTCAACTGTATGTCAAGCTTGGGTTTCAAGTAACAGAGCTATTTTAAATCTACACTGGTTACTGAAGGAGAGGAAAGCGAATATTGGTATAAATGGGCGGGGTAAATTAGCTGCATGTGCGTTCACTTCACGTTTTTCCTGTCATTGGGACTGTTGTGGCGAACAGGATGAGGAAGGTCTGACACATCCGCTTCGAGGATCATCCCCATGCCTAATCTGCAGCAACCTTTTCCCTCTATGCGGGTAAGCACTTTGCGTGTACCTGTATATGATGACCCTCAAGAAGACCTATACAAGTATTTTGACCACTGTGCTGATGCCATAGCCAGTGAGGCAGAAAGGGGAGGCCGCACTGTTGTGTATTGCAAGAATGGACGGAGTCGCTCAGCTACTGTCTGTGTGGCCTATTTAATGAAGCATCAGGGTCTCACCTTGACAGATGCCTTCCAGGTAGTAAAAAGTGCCAGATCAGTAGTTGAGCCTAACCCTGGATTCTGGACTCAGCTGGAGCGATATGAACAGGAGCTGAAGATCAGGAAATCGTCCAGCCACAGATGTAACCTCTCTCCACTTTGACTTCATACCAACATTTTCTGATATGACAATCTCAACAAAATCTTCAGGAGTTTTATAATAGCTAAGGCTTTAGACATGTCGCTGTTCAAGctttcttcaaataaaaaatgccatataataacaataataatgatacgTGCCTTGAATGATTAtaaagtgctttgatgcaacctgtgttgttaaaagcactatataaataaaaatgattgattgattgataaagtGTGATAacgattatattatattttaaaaagaaaaaggagtatg

Function

symbol description
dusp28 Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity. Predicted to act upstream of or within protein dephosphorylation. Predicted to be located in cytoplasm. Orthologous to human DUSP28 (dual specificity phosphatase 28).

NR:

description
dual specificity phosphatase 28-like isoform X1

GO: NA

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
TU14467 False 1122 TUCP 0.33 5 5823993 5826286
XM_043223461.1 False 1422 mRNA 0.39 3 5824155 5826250
XM_043223472.1 True 1680 mRNA 0.38 2 5824155 5826250
XM_043223481.1 False 1042 mRNA 0.40 4 5824152 5826250
XM_043223488.1 False 1037 mRNA 0.40 4 5824154 5826250
XM_043223496.1 False 1019 mRNA 0.40 3 5824154 5826250

Neighbor

gene id symbol gene type direction distance location
sft2d3 sft2d3,LOC107705299,LOC107653510,LOC107737414 coding upstream 15445 5807171 ~ 5808548 (+)
si:ch1073-184j22.1 si:ch1073-184j22.1,LOC107564249,LOC107653514,LOC107705312,LOC107660327,LOC107550431,LOC107724751,LOC108440865 coding upstream 23122 5794226 ~ 5800871 (+)
gnb4a LOC107705311,LOC107653516,LOC107564248,LOC108440866,LOC107724752,LOC107660315,LOC103030165,LOC107550449 coding upstream 44400 5765068 ~ 5779593 (+)
pex5lb pex5lb,LOC107564246,LOC107653517,LOC107660316,LOC107550448,LOC107724753 coding upstream 60134 5730605 ~ 5763859 (+)
foxf2a LOC107671725,LOC107745889,LOC107563086,LOC107685282,LOC107724048 coding upstream 932232 4888123 ~ 4891761 (+)
LOC122361161 NA coding downstream 10362 5836648 ~ 5838633 (+)
trnag-gcc_1 NA coding downstream 143364 5969650 ~ 5969724 (+)
trnag-gcc_2 NA coding downstream 145233 5971519 ~ 5971593 (+)
trnag-gcc_3 NA coding downstream 148429 5974715 ~ 5974786 (+)
trnag-gcc_4 NA coding downstream 151629 5977915 ~ 5977989 (+)
G9671 NA non-coding upstream 98977 5724701 ~ 5725016 (+)
G9663 NA non-coding upstream 106587 5717178 ~ 5717406 (+)
G9660 NA non-coding upstream 118108 5702617 ~ 5705885 (+)
LOC122357632 NA non-coding upstream 216568 5604474 ~ 5607425 (+)
G9632 tfr1a,LOC107705306,LOC107653522,LOC107564243,LOC107728405 non-coding upstream 232406 5577466 ~ 5591587 (+)
G9690 NA non-coding downstream 6071 5832357 ~ 5832690 (+)
G9692 cldn15la,LOC107737418,LOC107550432,LOC107695160 non-coding downstream 25983 5852269 ~ 5859952 (+)
G9697 NA non-coding downstream 315756 6142042 ~ 6142865 (+)
G9758 NA non-coding downstream 549857 6376143 ~ 6376597 (+)
G9825 NA non-coding downstream 676104 6502390 ~ 6502594 (+)
G9630 LOC107705308,LOC107564255,LOC107728403 other upstream 214717 5608327 ~ 5609276 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other upstream 912817 4909129 ~ 4911176 (+)
LOC122361055 LOC107565287,LOC107667819 other upstream 924613 4898372 ~ 4899380 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other upstream 1234166 4572945 ~ 4589827 (+)
G9416 wrnip1 other upstream 1253899 4563897 ~ 4570094 (+)
trnag-gcc_20 NA other downstream 394140 6220426 ~ 6220500 (+)
trnag-gcc_21 NA other downstream 396159 6222445 ~ 6222519 (+)
sst2 LOC107549725,LOC107710806 other downstream 540891 6367177 ~ 6367954 (+)
G9887 NA other downstream 864086 6690372 ~ 6690779 (+)
G9889 NA other downstream 865382 6691668 ~ 6692375 (+)

Expression


Co-expression Network