G9840


Basic Information

Item Value
gene id G9840
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 6527369 ~ 6527632 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU14680
CGACATTTATCAAATTCCCCAAGAGTCGGACTCCTAATAAATTAATCCAAATTAAACATGGCCACACTTAATACCAGGAAACGTACTGAACTAGAAACAAATTTGCCTTAAGCAATAGACAACGCCCCCTCTACAAACCCTATAACTAGCTCTACAAATGAAATCACTTTGTCAACCGTGTTGATCCCAACCAAACCAATGCCCACAAAGAAAAAACTCGGGACTTTTaatatcccggacgagcccccaaaaATGTTACGATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14680 True 264 lncRNA 0.45 1 6527369 6527632

Neighbor

gene id symbol gene type direction distance location
slc35d1b slc35d1b,LOC107690965,LOC107573325,LOC107745697,LOC108415103 coding upstream 38669 6474022 ~ 6488700 (+)
fgf12a fgf12a,fgf12,LOC107549734,LOC108436038,LOC105006885,LOC108280711,LOC106598267,LOC106568709,LOC103365152 coding upstream 189797 6257551 ~ 6337572 (+)
mb21d2 mb21d2,LOC107705301,LOC107572431,LOC107673980,LOC105899163 coding upstream 271796 6249048 ~ 6255573 (+)
crfb16 LOC107676306,LOC107758261,LOC107568418 coding upstream 287675 6235870 ~ 6239694 (+)
trnag-gcc_19 NA coding upstream 413662 6113637 ~ 6113707 (+)
LOC122361319 NA coding downstream 312994 6840626 ~ 6842093 (+)
bpnt2 impad1,LOC107663252,LOC107741594 coding downstream 328612 6856244 ~ 6879649 (+)
penka LOC107748924,LOC107675675,LOC107573453 coding downstream 442861 6970493 ~ 6973171 (+)
cryz cryz,LOC107553670 coding downstream 556502 7084134 ~ 7098176 (+)
fam151a fam151a coding downstream 578579 7106211 ~ 7111272 (+)
G9839 NA non-coding upstream 66 6527091 ~ 6527303 (+)
G9838 NA non-coding upstream 1199 6525954 ~ 6526170 (+)
G9837 NA non-coding upstream 2274 6524782 ~ 6525095 (+)
G9836 NA non-coding upstream 2948 6524120 ~ 6524421 (+)
G9834 NA non-coding upstream 3902 6522805 ~ 6523467 (+)
LOC122357847 NA non-coding downstream 11657 6539289 ~ 6554930 (+)
G9847 NA non-coding downstream 18598 6546230 ~ 6551351 (+)
G9884 NA non-coding downstream 121814 6649446 ~ 6649800 (+)
G9890 NA non-coding downstream 214101 6741733 ~ 6742173 (+)
G9892 NA non-coding downstream 228191 6755823 ~ 6756092 (+)
sst2 LOC107549725,LOC107710806 other upstream 159415 6367177 ~ 6367954 (+)
trnag-gcc_21 NA other upstream 304850 6222445 ~ 6222519 (+)
trnag-gcc_20 NA other upstream 306869 6220426 ~ 6220500 (+)
dusp28 dusp28,LOC107737412,LOC107695162,LOC107653509,LOC107705300,LOC107564257 other upstream 701083 5823993 ~ 5826286 (+)
G9630 LOC107705308,LOC107564255,LOC107728403 other upstream 918093 5608327 ~ 5609276 (+)
G9887 NA other downstream 162740 6690372 ~ 6690779 (+)
G9889 NA other downstream 164036 6691668 ~ 6692375 (+)
G9925 LOC107563058,LOC107549254 other downstream 458666 6986298 ~ 6987119 (+)
lrrc53 LOC107700485,LOC107588905,LOC107716924 other downstream 570671 7098303 ~ 7105792 (+)
gng12a gng12a,LOC107700509,LOC107716954,LOC107551713 other downstream 758038 7285670 ~ 7300101 (+)

Expression


Co-expression Network