crfb16 (LOC107676306,LOC107758261,LOC107568418)


Basic Information

Item Value
gene id crfb16
gene name LOC107676306,LOC107758261,LOC107568418
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 6235870 ~ 6239694 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219558.1
GGAGCAGACATCACAAAGACACCTACAGTCATTGATATTAAGACTCTTTCGTTTCACATCAACATGATTAGCAGgggttgttttatttgaaaaaggaGAGTGGAAAACCTCTGGACTATTTTGGTTTTTGCCAAAGGAAGGGGAGTCCAGGGCTTGACCAGGGCTGGTGTTTACAAAGACAGGAGAAGAAGAGGTTATGTGCAGTGGTTTGATTAAGACTCTGTTATCTCTGCTTCTGTACTTTACCATTAACTATTCAAGTTCACTATCCACAACTCTGAATGTCTCAATGCATTCTGTAAACATGATGCACATCCTGAAATGGAGCCTCTTGCAAGCACCCTGTTCCAATGTCAACTATTCTGTACAATTTCAAGGGGAGTATGAGTTATACAATCTTAATGGAACATGGGTAGATGCTTTTGACTGCCAAGAGATCAGTGAAAACAGGTGTGACCTCACCCATGACTTGGCCTCCAACTCTGACTACAGTATTCGCATAAAAACGAACTGTGATGGCCAGAAATCATGGACACAACTACCAGCGACCTTCAACAGAAGAGAGAcAGTGTTACTGGTTCCAAAAATGATGATGAATGTGGATGGGGATCCTATCCAGGTGGATTTCAACACAACTCTTCATGATCTGAATGTAATGCTTAAAGTCTGGAAGGAGGGGGCAGAACTGAATGCCTCCATTCATGTGATCAGAGCTTATCCATACCATTTTTCCATTGCTGCCCATCGAGGGAAAGAGAAGATGTGCTTCAAGGCAGAAGCACTATTAGAAGCCATTAACAAGAGCTGCAGCATTGACACACAATGTGTCATCATACCTAAGCAGACATCTGACTATATGAAGCTGGTGATGGTGAGCATCGCTGTAGCTATAGCAGTTACCGTGGCTTTTATTCTGGGATGGCTGTCTACACATCTTGGTCCACAGATCAAACAAATCATTTGCCACCAGGAGAACATTCCCAATGTGCTGCTTGATGACTGGACCACCAGAACACCCATCCTTTGTACTGATGTTTCACTGGAGCCCATAGATCCACTTTTGCTACTCCTCTCAGCAGAGCATCAGTGCACAACGGTGCAGTTTGGAGGGAACAAGTTAGACCAATGAGTTGGACTGCAGGACATAAgctaaccaaaacaaaacaaaaaaatgac

Function

NR:

description
interleukin-20 receptor subunit beta-like

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function
GO:0003723 RNA binding molecular_function

KEGG:

id description
K05137 IL20RB; interleukin 20 receptor beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219558.1 True 1176 mRNA 0.43 7 6235870 6239694

Neighbor

gene id symbol gene type direction distance location
trnag-gcc_19 NA coding upstream 122163 6113637 ~ 6113707 (+)
trnag-gcc_18 NA coding upstream 126223 6109573 ~ 6109647 (+)
trnag-gcc_17 NA coding upstream 158406 6077390 ~ 6077464 (+)
trnag-gcc_16 NA coding upstream 185844 6049952 ~ 6050026 (+)
trnag-gcc_15 NA coding upstream 197490 6038306 ~ 6038380 (+)
mb21d2 mb21d2,LOC107705301,LOC107572431,LOC107673980,LOC105899163 coding downstream 9354 6249048 ~ 6255573 (+)
fgf12a fgf12a,fgf12,LOC107549734,LOC108436038,LOC105006885,LOC108280711,LOC106598267,LOC106568709,LOC103365152 coding downstream 17857 6257551 ~ 6337572 (+)
slc35d1b slc35d1b,LOC107690965,LOC107573325,LOC107745697,LOC108415103 coding downstream 234328 6474022 ~ 6488700 (+)
LOC122361319 NA coding downstream 600932 6840626 ~ 6842093 (+)
bpnt2 impad1,LOC107663252,LOC107741594 coding downstream 616550 6856244 ~ 6879649 (+)
G9697 NA non-coding upstream 93005 6142042 ~ 6142865 (+)
G9692 cldn15la,LOC107737418,LOC107550432,LOC107695160 non-coding upstream 375918 5852269 ~ 5859952 (+)
G9690 NA non-coding upstream 403180 5832357 ~ 5832690 (+)
G9667 proc,LOC107705314,LOC107653506,LOC107737413 non-coding upstream 404755 5770058 ~ 5831115 (+)
G9671 NA non-coding upstream 510854 5724701 ~ 5725016 (+)
G9758 NA non-coding downstream 136449 6376143 ~ 6376597 (+)
G9825 NA non-coding downstream 262696 6502390 ~ 6502594 (+)
G9827 NA non-coding downstream 272470 6512164 ~ 6512394 (+)
G9834 NA non-coding downstream 283111 6522805 ~ 6523467 (+)
G9836 NA non-coding downstream 284426 6524120 ~ 6524421 (+)
trnag-gcc_21 NA other upstream 13351 6222445 ~ 6222519 (+)
trnag-gcc_20 NA other upstream 15370 6220426 ~ 6220500 (+)
dusp28 dusp28,LOC107737412,LOC107695162,LOC107653509,LOC107705300,LOC107564257 other upstream 409584 5823993 ~ 5826286 (+)
G9630 LOC107705308,LOC107564255,LOC107728403 other upstream 626594 5608327 ~ 5609276 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other upstream 1324694 4909129 ~ 4911176 (+)
sst2 LOC107549725,LOC107710806 other downstream 127483 6367177 ~ 6367954 (+)
G9887 NA other downstream 450678 6690372 ~ 6690779 (+)
G9889 NA other downstream 451974 6691668 ~ 6692375 (+)
G9925 LOC107563058,LOC107549254 other downstream 746604 6986298 ~ 6987119 (+)
lrrc53 LOC107700485,LOC107588905,LOC107716924 other downstream 858609 7098303 ~ 7105792 (+)

Expression


Co-expression Network