wu:fi34b01


Basic Information

Item Value
gene id wu:fi34b01
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 171622 ~ 175008 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219950.1
tcaaacacagCCTAGCAAACTATAGACTAGGCAATGAATCTCGAGTAATAATTAAACGGATCAGGTGATTTACCTATAAATTACGCTTTAATTCGTGGTACGTGCGAGTGCTTAAAGTGGCGCGGTAAAGCGTGTTTAATAAACGTATCACTTTCACGAGCTTGTGCTGCGATGGCGTCTTGGAAAATACGTGGACGGTTAttaattatagtttattttttcacgTGCATTACTTTAGTATACTGTAAAAGTTTGTTGCCGTTTTCTGAAACGGAAAAGACGAACTATGAAGGTGGCGACGATGTTTCGGCACAATTTGTGTCAGGTCAAGAGGGATATTTTGTGCCCTTTTCTAATACTGACTTTCTCAGTGACGATGCTGCAATTTCAGGTCTGCAgaagaaaacattcattaaaggGCAGCTACTCGGTTCCTCTGAAGCAGCCTGGGATGCCATGTCTCCAAAATTGAGGTGTGGTGACGATCTCATAAATTTACAACTCAGTGGTCCAGAGGTAGAAAATGTTGAGCTTTGTCGAGGTAATGGGGTGGCTGTTCTTCTCACTCATTTGCCACCTCACTGTGGACACGCCGCACCCACTTATACAGGTCTCGTTTATGCTACTCCCTATGATGGATGTGGTGTTACGCAAAAGGGAGGGTATTATGTGATGCAGATACAGTGGCAGGGAAACTCTGCAGTCATTTCTTGTCCTATGACCTCTAACACTGCAAATGAAACTTTCCTGGGACCTAATCTTcctgaatatttgaatattctgCTGCTTCCCTCTCCTCCTGATACACAAAATCCAGAAACGCCTACAGTGACACAAGTGTCTgattttacaacattaaaaaaccCACCTTCTCGTTATCCCCAAGTGAGCCTACAAGGTTTTTGGCCTTTCCCCAATTATGTTTTTCCTGGAACAGTTTATTCCATAGATGAGCAAATGGAGAAACCTTTTACAACTGCCCTAGTTTCCCAAggaccagatggaaagcctcaacaacCCAAATACCCCCAGATGCCTTGGCTTTATGACTTTGTTGGTTACCCTTATGGTGACCTGAAACCTGCTCCATCCTTTGGCTCTGACAGTAAATCAGGTGGTCAAGCACTGGATGGAAAGCCTCCACAACCCAAATACCCCCAGATGCCTTGGCTTTATGACTTCGTTGGTTACCCTTATGGTGACCTGAAACCTGCTccatcctctggctctgacagTAAATCAGATGGTCAAGCGCCATatggaaagcctcaacaacCCAAATACCCCCGGATGCCTTGGCCTTATGGTGACCTGAAACCTGCTAcatcctctggctctgacagTGAATCAGATGGCCAAgcaccagatggaaagcctcaacaacccaaatacccccagatgccttggctttatggtgacctgaaacctgctccatcctctggctctgacagTGAATCAGATGGCCAAgcaccagatggaaagcctcaacaacCCAAATACCCCCAGATGCCTTGGCTTTATGATTTTGTTGGTTACCCTTATAGTGACCTAAAACCTGCTccatcctctggctctgacagTGAATCAGATGGCCAAgcaccagatggaaagcctcaacaacCCGAATACCCCCAGATGCCTTGGCCTTATGGTGAACTGAAACCTGCTccatcctctggctctgacagTGAATCAGATGGCCAAGCACCAGATGGAAAGCCCTCAACAACCTGA

Function

GO:

id name namespace
GO:0022412 cellular process involved in reproduction in multicellular organism biological_process
GO:0051704 multi-organism process biological_process
GO:0044703 multi-organism reproductive process biological_process
GO:0007276 gamete generation biological_process
GO:0048609 multicellular organismal reproductive process biological_process
GO:0019953 sexual reproduction biological_process
GO:0032504 multicellular organism reproduction biological_process
GO:0046332 SMAD binding molecular_function
GO:0070412 R-SMAD binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219950.1 True 1734 mRNA 0.46 4 171622 175008

Neighbor

gene id symbol gene type direction distance location
LOC122325083 erich6,LOC107681751,LOC107708872,LOC107708884 coding downstream 49008 224016 ~ 233410 (+)
LOC122325174 NA coding downstream 63734 238742 ~ 240396 (+)
LOC122325106 pter,LOC107681810,LOC107599857 coding downstream 384971 559979 ~ 564990 (+)
LOC122325155 selt1a,selenot,LOC107681817,LOC107708642,LOC106599070 coding downstream 430078 605086 ~ 609167 (+)
zgc:153615 zgc:153615,LOC107747506,LOC107691014,LOC107708656,LOC107599852,LOC108430722,LOC103026425 coding downstream 473976 648984 ~ 654781 (+)
LOC122325201 NA non-coding upstream 7975 162991 ~ 163647 (+)
G8169 NA non-coding downstream 35633 210641 ~ 220744 (+)
LOC122325207 gpt2l,LOC107599855,LOC107708598,LOC107691046,LOC107747508 non-coding downstream 73473 248481 ~ 256886 (+)
G8207 NA non-coding downstream 312772 487780 ~ 515969 (+)
G8209 c1ql3b,LOC107708591,LOC107747511,LOC107599856,LOC107681760,LOC107566459,LOC107691085,LOC107691073 non-coding downstream 390888 565896 ~ 566914 (+)
G8151 NA non-coding downstream 396021 571029 ~ 603945 (+)
G8167 NA other downstream 25084 200092 ~ 223367 (+)
LOC122325097 fuz,LOC107708997,LOC107691039 other downstream 66443 241451 ~ 245364 (+)
LOC122360757 fam73b,miga2,miga1,LOC107599369,LOC107705989,LOC107675762,LOC107737175,LOC107661559,LOC107708777,LOC107681767,LOC107722319,LOC107703235,LOC107558173 other downstream 272154 447162 ~ 457745 (+)
st6galnac5a st6galnac5a,LOC107681827,LOC107708707,LOC107599846,LOC107751866 other downstream 624924 799932 ~ 828405 (+)
ccdc39 ccdc39,LOC107722234,LOC107701322,LOC107708988,LOC107568623 other downstream 1222516 1397524 ~ 1408721 (+)

Expression


Co-expression Network