LOC122325182


Basic Information

Item Value
gene id LOC122325182
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 432668 ~ 445573 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220133.1
CAGGCAGAGCAGCACAGGGAACGTGAAACAACCACGTCTCCAATCTGACACCGAAGTCGCCTGTGGAGAGGGAAAGATCAGCGGACAAAAGAAAACGCAAGATAAGAGCATAGAGCGAAACCAAGACAAGTACATTTAACCTTTGAAgatagttttctattttttgggGTCCAGTTTTACTTTTGAAAAGCTTTTCATTAATAATGATTATGCACACTTTATAAATTAGGCAAGTTAGgttttcgttcttttttttttgtgcgctTTTTGAGTTTTAAGGAAACGTTCTCACTGTTGGAATGGTCTGATTCAGGAGAATCTGCTGCGGAAACCTAGACAAGAAAACTAAGAACGGAGCCTAGAGCGTTTTTGTGTCTCGAGTTCAGTAGTCTCGCGCATTGAGGAATGTTACTGAAGCTTCAGTCGTTACTCGCCCTCGCCAGCGTATTTCTGGTGCAAAGCGGGACCAGTGACAAAGAAGTCAGACCAGAGGCATGGCTTCAGCAGTATGGGTATCTTCCTCCTGGCGATGTTCGGGCTCAGGCAATTCGCTCTCCTAAATCCATCATCACTGCTATATCCGCTATGCAGAAGTTCTATGGCCTCACTGTCACCGGCACTATGGATCCAGCCACTCTCTCGGCCATGCAGCGGCCAAGGTGTGGAGTTCCAGATAAATTTGGCTCTGAACTGAAGAGCAACCTACGAAAGAAACGCTATGTCATCCAGGGCctgaaatgggaaaaaaaagaagtcactTTCAGTATCCAGAACTACACTCCTAAAGTGGGCGAACAAGCCACACACGAGGCCATCAGGAAGGCCTTCAAGGTTTGGGAAGCTGTGATCCCACTCAAGTTCCGTGAAATCCCATACAGTCAAATCAATGGCAAAGTGGACAAGTTTGCAGATATCATGCTTTACTTTGCGGAAGGCTTTCACGGAGACAGCACCCCATTTGATGGCGAGGGAGGTTTCTTGGCCCATGCATACTTCCCTGGTCAAGGTATCGGAGGTGATACCCATTTCGATGCAGCAGAGCCTTGGACAACAGGCAATGTTGACCAGGGAGGTAATGATGTGTTCCTGGTGGCAGTGCATGAATTGGGTCATGCTCTGGGTTTGGAACACTCAGGCGATCCCTCTGCCATCATGGCTCCCTTTTACCAGTGGATGGACACAGAGAACTTTGTGCTTCCTGATGATGACAGACGGGGGATCCAGCAAATATATGGTGCTGGCTCTGGTGAGGTGCCCCAGCCTCCGGCCCCCCGGCCCCCCCCTCATCGCCCTCCGCAGAAGTCAAAACCAGCCCACCCCAACTCCAAACCCAACATCTGTGACGGAGGGTTCAACACTTTGGCAATCCTACGACAGGAGCTGTTCGTCTTCAAGGATCAGTGGTTCTGGAGGGTGCGAGATAATTCTGTGGTGCCTGGATACCCGATGCAAATTAGCTACTTCTGGAGAGGTTTGCCTCCCAAGATCGATGCCGTCTACGAAAACAGCGAGGGGAAATTTGTCTTCTTCAAAGGCAACCGGTTCTGGGTGTTTAAGGATACAACTCTACAGCCCACATATCCTcaggacatttctctttttggCAGTGGAATGCCCACACAGAGCATTGAAACAGCTGTTTGGTGGGAAGACGTGGCCAAAACCTACTTCTTCAAAGGGGACAGATACTGGAGGTACAATGAGGATATGAGAACCATGGACCCTGGATATCCAAAACCCATTACTGTGTGGAAAGGCATTCCAGACTCTCCACAGGGAGCTTTTGTGGACAAAGAAAATGGGTTCACGTACTTCTACAAGGGAAAGGAATATTGGAAGTTCAACAACCAGAGACTCAGAGTGGAGCCTGGCTACCCAAGGTCCATCCTGCGTGATTTTATGGGCTGCGATGGCTTACCCGCCGACCCCGACTGGGACTGGAGCCCTCCACAGGAAGAAGAACCGCCACAATATGACAATGATGACGTTGACATCGTACTCAAGCTGGAGAGCAGCGGTGGAGCAGAGAAAGCGGTGGCCATCGCCATCCCGTGCGTCCTGGCCCTGTGCATGATGGTGCTGCTTTACACCGTGTTCCGCTTCAAAAGGAAGGATACGCAGCGCCACATACTGTACTGCAAGAGATCCATGCAGGAGTGGGTCTGAGAATTAAAGCTCTCGCTCCTTCTGCTAAAACTATTTTCCTCTTCAAAATCCCTTCAAAGGTCAAAAAGTGGCTCATCTTGAGGTGCTGACTTTATGTCGGTGACTTTATGAAGGACGACATAATGAACAGCATGCCGACTTCCTGTTCCCATTGTCAGTCTCCGTAGATGGCAATGTGTCGTTTTTGTATGGTTTTGGAACTCTGTGTGGCCAATCTTGGCGGCCATTTTGGTTCCTAGAGTCCAATGTGGGAGTAAACTGTTACTCTACAAACCGTAATTATAAACTTTTCAAttgattttagaattatttatcaTCAGACTGCTGATCTAGATACTCCATGAAGGTTGAACTCACCTGTGTCACTCCGAAATACTTGCTTGTGTTGAAAAAACTGATACCCAAACCAAATATGCCCTTAGTGTCCAAAGAGGATTGCTTCATTCACATGGGATATTCTGAGATGACTGGCTTATCGATCATTATTTGAGTTCTATTTGGCTGCATTCATCTGCAGAGTACATGGGATCTATCTGCTTGGAAATCAGAAGGACCTTGACATATAACATCGGGGCTACATGCAATATTTCGTCGAATGCCTTAATCACATAttgagtttatttttctgtgtgttagTGTACATGTGCCTGTGTGAATGTGACCCCTTTCCTTAAATTCCTTTGCTTATCACTGTTCTTTTGATGCACTACTGACTGACAGAGACTTGCAGTAAGATCTGAAGTGCCGCtgactgtttaaatgtttaattaaaaacgaGTGTATGTCCACGTTCTGTGCTGCTGCGACTCCAAAGTGTCCCGCAGCACAAAACCTTAGCTTTTTGGTCACGTGCTTCCAATCAATTCGTAGGGAATTTATTAAACGCAGAAATGCCGTTTAGCAGAAATACCTAACGGACCTTTTTTGAGAATCAGATTAcgaaccttaaaaaaataacgtGAAAATGTTAGTTATATATCAAAACACTCATGTTAGCACAGTTTTCAATGCAATGTCTAGGCAATATTTGAGGTTCCTTGACAAAATACTTGTGCTTGCAAGGCAGCAAGTGAATTGTGGTAAAGATCTCGTGCATCTGTTGAGCGTGTTCTAGAACCAACAAATATTATAAGATAGACTTTTAGGTGTAAAGCCAGTATTGACATGAAAACTGCATTGCCTTGTTTTATTCAGTGCTGTGCGTGAACACATTTGTTCAACACGTGCACACTAGTAAGTTTCATCTTTGTTCAGTGTCTCTGCTACTTTACTTCACAATTCACtagagaaacatttttaatgtccgATGATTTTAAACATTGTGTTGTGCTCGCAGGTCAAATTGACCTTAATTGCCTTCAATAAAATTCCCTAAacatcattattaaaaacaagaagGAATCAGGtgtaaacagaaaaaattaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220133.1 True 3592 mRNA 0.45 11 432668 445573

Neighbor

gene id symbol gene type direction distance location
LOC122325049 LOC107566471,LOC107552291,LOC107691105,LOC107681831,LOC107747512 coding downstream 115983 294469 ~ 316685 (-)
LOC122325145 selt1a,selenot,LOC107681817,LOC107708642,LOC106599070 coding downstream 195075 233507 ~ 237593 (-)
LOC122360735 NA coding downstream 209631 214664 ~ 223037 (-)
LOC122360720 NA coding downstream 227318 204050 ~ 205350 (-)
LOC122360711 NA coding downstream 237310 192500 ~ 195358 (-)
LOC122325042 LOC107708546,LOC107681784,LOC107747514,LOC107691124 coding upstream 23023 468596 ~ 515724 (-)
LOC122325126 c1ql3b,LOC107747511,LOC107599856,LOC107566459,LOC107681760,LOC107691085,LOC107708591,LOC107691073 coding upstream 119090 564663 ~ 566800 (-)
LOC122325065 gpt2l,LOC107599855,LOC107708598,LOC107691046,LOC107747508 coding upstream 134200 579773 ~ 594221 (-)
LOC122325090 fuz,LOC107708997,LOC107691039 coding upstream 151639 597212 ~ 601234 (-)
gipc2 gipc2,LOC107681828,LOC107690984 coding upstream 222727 668300 ~ 680383 (-)
LOC122325225 NA non-coding downstream 28846 398126 ~ 403822 (-)
G8257 NA non-coding downstream 63220 291406 ~ 369448 (-)
LOC122325194 NA non-coding downstream 208780 223256 ~ 223888 (-)
G8273 LOC107681831,LOC107552291,LOC107708861 non-coding upstream 102461 548034 ~ 551702 (-)
G8279 NA non-coding upstream 174179 619752 ~ 635841 (-)
G8280 NA non-coding upstream 174854 620427 ~ 637790 (-)
G8296 NA non-coding upstream 248007 693580 ~ 694370 (-)
G8309 NA non-coding upstream 328686 774259 ~ 776958 (-)
G8237 LOC107599853,LOC107708895 other downstream 208734 142744 ~ 223934 (-)
dipk2aa dia1a,LOC107681802,LOC107599840,LOC107722302,LOC107565821,LOC108437525,LOC108268022 other upstream 734372 1179945 ~ 1202987 (-)
mfsd8l2 si:ch211-38m6.6,LOC107681768,LOC107656858,LOC107565819,LOC107722537,LOC107599859,LOC108437504,LOC105026921 other upstream 885857 1331430 ~ 1337998 (-)
colgalt2a LOC107593860,LOC107681694,LOC107715500 other upstream 1080175 1525748 ~ 1532557 (-)
gng5 NA other upstream 1476722 1922295 ~ 1940721 (-)
slc1a7a slc1a7a,slc1a7,LOC107722044,LOC107671767,LOC107681716,LOC107593788 other upstream 1570835 2016408 ~ 2038705 (-)

Expression


Co-expression Network