pik3r3a (pik3r3,LOC107593753,LOC107711700,LOC107661887,LOC107671741,LOC107574784)


Basic Information

Item Value
gene id pik3r3a
gene name pik3r3,LOC107593753,LOC107711700,LOC107661887,LOC107671741,LOC107574784
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 3536474 ~ 3543831 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220332.1
ATAAGAGTTTGATTTAGTCACGGCACGCAGTTCATTTGGATATTTAGATAGGTACATTTTGTTATGAAGGTGAAGATCATGTTAGTTATTCTGGACGACGATTATAAGCTGCATTGCTAAGTTTTATTTTGAGTGACTGGCTGCCAAATGATAACAACTGGACACTTGGATTAAGACGAGAAATACGAGCATTTTTCGCGTTTTTTATCATTGTTAAACCGTTTTTACTTCGCTATCTTAGGTATAACAACGGGACAGTCGTTTATAATTGTTTGCCGTTACGATTTACGTTTTTTAAAAGGGCTTAATTCACTTCTGCAACACGATCCATTGTTGAAGAAAAGATGTCATCGTCTGCAGAACCCTTTTCCTACATCGAAATGAGTCGAGTCCGCGCAGCTGACACTGaaATCGCTAGCGACGATCATCTCCTCAGAGAAACGGAGCCCAGTGATTTATTACAGGAGGCCGAGTGGTACTGGGCTGACATATCTAGGGAGGAGGTGAATGAAATTCTCCACGGCATGCCGGACGGGGCTTTCCTGGTCCGAAACGCTTCCTGCAAGCGCCGGGGAGAATATACGCTAACCGTTAGGAACAACGGCGCCAACAAACTCATCAGGATCCAGCACCAGGATGGGAAATTTGGGTTCTCCGAGCCTCTGACCTTCAGCTCGGTGCCGGAGCTGATATCTTACTACAGGCATCGGAGCTTAGTCCAGTACAACAGCTCTCTGGATGTCACGCTGGCTTATCCCGTGTCTCACTGCGACCCGCTTCATACCTGTCCTGATCTACCCGTGAAGGAAGAGTTTTTGAGTGCAACCAGAGAGAAGCTGCATGAATGTTTAAGACTGTTTCAGAAGACGGCCGAGTATGACCAGCTGTATGATGCCTGCACTACGTTATTACAGGAAATCCAAAGGAGAAACGCATTCGAGGCCGTCGACGCCACAGAGATGCCTGAAGAACAGTGTTCTTCTCAAGAGAACCCTTGCCAGGGTTTCCACAGTGAGCCGAAAGAGTCTGAGCGCGAGAAGAGCGTGGAGCTGCTGGAGGAGGAGAGCTGGTTTGTGGGAGATCTCGGCCGAGGACAGGCAGAGGAGCTTCTCTGTGGGAAACCGTCCGGAGCTTTCCTCATCCGTAACAGCAGCACCAAGGACTGCTACGCCTGCTCTGTGGTggtcagaggtcaggtgAGGCACTGCGTGATTCGACACACGGAGCGCGGCTACGGCTTCGTCGAGCCCTTCGATCTGCACAAGTCTCTGAAGGACCTGGTCGTTCACTACCACCACACCTCTCTGGCGCAGCACAACCAGGCTCTGGACGTGCGGCTGGCGTACCCGGTCCACGCCGCTCACTGAACAGAACCGAGGAGACGCTCGCTCTTACCTCCTGGACAGTGTACACGCGCGACGAGCTCAACTTTCTTTGTATATTGCACTTTCCAAAGCATTCCTCGTGGTCATAAAGATACTCCAGTACTTGAACAAGTGTTTGATGAGCCCTTTGTAGACATGTTTACAGACACTCAGAAACGTCACGATGAGTTTTGTGACGCGCTCATGCTCTTTTAagcaatttttcttttctttttttttttcgcggGCGAATGATTATAATCTTTTATCGCAAATCATTCATCGcccaaaacattttagaaatgtactTCGTGAATGTAACACAGTCACACTTTCAGATCTTGCTTTGTAACTAAAAATCAAGATGCTCTTTTGCGCACCCAAGTAAGGATTttacgtctttttttttttttttttttttgatgcatggTTTATTCGTTTGATAGAAACCTCTCTCAAACTGGTCTTAGTTTATAAAATCGATGAATAACGTTTTAAAGACGGCTTGAAGATTTAGTCAGAATACGAGCATCCATTTTGCATCGGTTACAGAGTAGCAGGAAATTCAGTTTATTGAATTTTACGTTTCTGCCGTACTCCTAATGTTTACCTTTTTTAactatgctttttttgttgtaagaGAAGCCAGGACACGGTGCAGCTGTCTTACGGGCTTCAAGAAGTTTAATACACGTGTCTGTGGTCGAGCACACGATGCCAAACTGCTTATTCTTGAGATGAGCGACTCTTTTTATTTGTCGTTTGTCATCGGCGGACGCTACGAAGGGAACGTTCGCCCTTTGTTTTCAGAGCTTATTTTTTGCTACAGTGGTTTCCCTTGCATGCTtcttataaaatgaaaaaaaaaaattaaaaaataaacaaaagcaaaaatgattgaataaa
>XM_043220340.1
ttgcgtTTATTCTGTCTAAGTCACTCTGCCTTTGTTCTGCTTCAAACGTAAGCTAAGTGTCAAGCGTCAATCATGGGAACGATAACATTTCAGTGTGCAGCGGAGGTAACATCTGCGAAAGTAGGTTCGTGTGATATAAAAaaATCGCTAGCGACGATCATCTCCTCAGAGAAACGGAGCCCAGTGATTTATTACAGGAGGCCGAGTGGTACTGGGCTGACATATCTAGGGAGGAGGTGAATGAAATTCTCCACGGCATGCCGGACGGGGCTTTCCTGGTCCGAAACGCTTCCTGCAAGCGCCGGGGAGAATATACGCTAACCGTTAGGAACAACGGCGCCAACAAACTCATCAGGATCCAGCACCAGGATGGGAAATTTGGGTTCTCCGAGCCTCTGACCTTCAGCTCGGTGCCGGAGCTGATATCTTACTACAGGCATCGGAGCTTAGTCCAGTACAACAGCTCTCTGGATGTCACGCTGGCTTATCCCGTGTCTCACTGCGACCCGCTTCATACCTGTCCTGATCTACCCGTGAAGGAAGAGTTTTTGAGTGCAACCAGAGAGAAGCTGCATGAATGTTTAAGACTGTTTCAGAAGACGGCCGAGTATGACCAGCTGTATGATGCCTGCACTACGTTATTACAGGAAATCCAAAGGAGAAACGCATTCGAGGCCGTCGACGCCACAGAGATGCCTGAAGAACAGTGTTCTTCTCAAGAGAACCCTTGCCAGGGTTTCCACAGTGAGCCGAAAGAGTCTGAGCGCGAGAAGAGCGTGGAGCTGCTGGAGGAGGAGAGCTGGTTTGTGGGAGATCTCGGCCGAGGACAGGCAGAGGAGCTTCTCTGTGGGAAACCGTCCGGAGCTTTCCTCATCCGTAACAGCAGCACCAAGGACTGCTACGCCTGCTCTGTGGTggtcagaggtcaggtgAGGCACTGCGTGATTCGACACACGGAGCGCGGCTACGGCTTCGTCGAGCCCTTCGATCTGCACAAGTCTCTGAAGGACCTGGTCGTTCACTACCACCACACCTCTCTGGCGCAGCACAACCAGGCTCTGGACGTGCGGCTGGCGTACCCGGTCCACGCCGCTCACTGAACAGAACCGAGGAGACGCTCGCTCTTACCTCCTGGACAGTGTACACGCGCGACGAGCTCAACTTTCTTTGTATATTGCACTTTCCAAAGCATTCCTCGTGGTCATAAAGATACTCCAGTACTTGAACAAGTGTTTGATGAGCCCTTTGTAGACATGTTTACAGACACTCAGAAACGTCACGATGAGTTTTGTGACGCGCTCATGCTCTTTTAagcaatttttcttttctttttttttttcgcggGCGAATGATTATAATCTTTTATCGCAAATCATTCATCGcccaaaacattttagaaatgtactTCGTGAATGTAACACAGTCACACTTTCAGATCTTGCTTTGTAACTAAAAATCAAGATGCTCTTTTGCGCACCCAAGTAAGGATTttacgtctttttttttttttttttttttgatgcatggTTTATTCGTTTGATAGAAACCTCTCTCAAACTGGTCTTAGTTTATAAAATCGATGAATAACGTTTTAAAGACGGCTTGAAGATTTAGTCAGAATACGAGCATCCATTTTGCATCGGTTACAGAGTAGCAGGAAATTCAGTTTATTGAATTTTACGTTTCTGCCGTACTCCTAATGTTTACCTTTTTTAactatgctttttttgttgtaagaGAAGCCAGGACACGGTGCAGCTGTCTTACGGGCTTCAAGAAGTTTAATACACGTGTCTGTGGTCGAGCACACGATGCCAAACTGCTTATTCTTGAGATGAGCGACTCTTTTTATTTGTCGTTTGTCATCGGCGGACGCTACGAAGGGAACGTTCGCCCTTTGTTTTCAGAGCTTATTTTTTGCTACAGTGGTTTCCCTTGCATGCTtcttataaaatgaaaaaaaaaaattaaaaaataaacaaaagcaaaaatgattgaataaa

Function

symbol description
pik3r3 Enables phosphotyrosine residue binding activity. Involved in cell migration involved in sprouting angiogenesis; positive regulation of macromolecule metabolic process; and protein kinase B signaling. Predicted to be located in cytosol. Predicted to be part of phosphatidylinositol 3-kinase complex. Implicated in colon adenocarcinoma. Biomarker of high grade glioma.

NR:

description
PREDICTED: phosphatidylinositol 3-kinase regulatory subunit gamma isoform X2

GO:

id name namespace
GO:0005942 phosphatidylinositol 3-kinase complex cellular_component
GO:0035014 phosphatidylinositol 3-kinase regulator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220332.1 True 2270 mRNA 0.45 8 3536474 3543831
XM_043220340.1 False 2003 mRNA 0.46 8 3536474 3543376

Neighbor

gene id symbol gene type direction distance location
LOC122355162 ipp coding downstream 2618 3523779 ~ 3533856 (-)
c2h1orf35 zgc:63882,LOC107711702,LOC107558012,LOC107671736 coding downstream 22346 3508126 ~ 3514128 (-)
wnt9a wnt9a,LOC107727550,LOC106599874,LOC107711706,LOC107558013,LOC107671764 coding downstream 95179 3411239 ~ 3441295 (-)
greb1l greb1l,LOC107727544,LOC107661895,LOC107671732,LOC107711675,LOC107593831,LOC107558001 coding downstream 235026 3255319 ~ 3301448 (-)
ro60 trove2,LOC107661896,LOC107671649,LOC107579204 coding downstream 304550 3222880 ~ 3231924 (-)
LOC122324860 LOC107671680,LOC107711685 coding upstream 19812 3563643 ~ 3573120 (-)
eif2b5 eif2b5,LOC107660395,LOC107671691 coding upstream 46565 3590396 ~ 3606100 (-)
rock1 rock1,LOC107671690 coding upstream 63119 3606950 ~ 3654684 (-)
LOC122356133 LOC107593750 coding upstream 133517 3677348 ~ 3682113 (-)
aqp1a.2 aqp1a.2,LOC107727507,LOC107671747,LOC107711684,LOC107660416,LOC107567874 coding upstream 140065 3683896 ~ 3691133 (-)
G9201 NA non-coding downstream 35635 3500381 ~ 3500839 (-)
G9116 LOC107661908,LOC107727543,LOC107711690,LOC107671673,LOC107558016,LOC107593878 non-coding downstream 200594 3331645 ~ 3335880 (-)
G9072 NA non-coding downstream 471871 3063110 ~ 3064603 (-)
G9071 NA non-coding downstream 475134 3060770 ~ 3061340 (-)
G9070 LOC107658692,LOC107727490,LOC107593833 non-coding downstream 475958 3059191 ~ 3060516 (-)
G9212 NA non-coding upstream 19097 3562928 ~ 3563309 (-)
G9190 NA non-coding upstream 38109 3581940 ~ 3584122 (-)
G9217 NA non-coding upstream 119368 3663199 ~ 3693207 (-)
G9268 NA non-coding upstream 241678 3785509 ~ 3790348 (-)
G9269 NA non-coding upstream 246637 3790468 ~ 3791262 (-)
jmjd4 jmjd4,LOC107558017,LOC107727502,LOC107711689,LOC107671663,LOC107593877,LOC107661902,LOC107661892,LOC107727496 other downstream 192930 3338145 ~ 3343544 (-)
G9115 cyp8b1,cyp8b3,LOC107727542,LOC107661909,LOC107558014,LOC107593879,LOC107711691,LOC107671665 other downstream 223560 3310965 ~ 3312914 (-)
G9089 gpr158b,LOC107727549,LOC107661898,LOC107593759,LOC107711710,LOC107671743,LOC107558004 other downstream 371650 3158834 ~ 3164824 (-)
prkag2b prkag2b,LOC107559383,LOC107711714,LOC107671734,LOC108430764,LOC107727488 other downstream 722986 2785758 ~ 2813488 (-)
anxa13l anxa13l,anxa13,LOC107681706,LOC107727547,LOC107559374,LOC107671694 other downstream 938629 2591627 ~ 2597845 (-)
thoc1 thoc1,LOC107727519,LOC107711694,LOC107660399,LOC107671701 other upstream 120566 3664397 ~ 3673250 (-)
higd1a higd1a,LOC107660422,LOC107708608,LOC107593748,LOC107671688,LOC107580039 other upstream 342251 3886082 ~ 3917688 (-)
G9466 NA other upstream 799599 4343430 ~ 4349997 (-)
LOC122357070 LOC107705116,LOC107671550,LOC107671683,LOC107562856,LOC107708586,LOC100331077,LOC108424938 other upstream 837167 4380998 ~ 4398364 (-)
G9557 LOC107563086,LOC107671725,LOC107724048,LOC107745889,LOC107685282 other upstream 1255411 4799242 ~ 4800643 (-)

Expression


Co-expression Network