LOC122326129 (tctex1d1,LOC107709344,LOC107719283)


Basic Information

Item Value
gene id LOC122326129
gene name tctex1d1,LOC107709344,LOC107719283
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 2291463 ~ 2293495 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220819.1
TCCGGTTTGTGGAAGAGTCGCATCAAAGCGGTTTTCGTAGGATAGCATTTTCCGCGATAAAATGTCTGATTTGGCGAAGGAGAAAGCGGCACGTCTGCTGAAGAAGCGCGGAAGCCTGTCTTCTCTGGGCAGTCATGAAGTCCGAGCTAAAGAAACCTTTGCCAGAACCAAGGACTCTATCAGTACAGTGTCTTACATGGAGGAGCCCGGACATCATGATGATATCCCACGACCTGTGGTGCAGATGGAGAACACCTATCAGCTCAgCCCCGCGCGACATTTTCCGGTGTTAACAGTGAAGGACATTCTGAAGGACGTGTTGACCAGCTACCTGCAGGAGGAGAAATATGAACCCGAGCTGTGCAGACAGATGACCAAAACCATCTCTGAgGTGGTCAAAGCCAGAGTTAAAGATTTGATGATTCCCCGCTACAAGATCATCGTCGTCATCAGCATTGGTCagatcagagaccagaacatgCGCATGGGGAGTCGATGCCTTTGGGACGAAACGCATGATAATTTCTCCTCGCATACTTTCAAAAACAGCTCGCTCTTCGCCACCGCTACCGTCTATggtgtttattttgaatgactGTGTAAGAAGCTGGCTTTTAGTGACGAGTGATTTCAGCCAACCAGTGGCATCTACACTACATATTTAAGTTAAATgacctttaaaatgacttaaaataactAGAGGTTGAGTAAGTATGAGGCAGTTCTGGTTCCTCAACATCTCCCATAATGATAAGTTAAATGCAAC

Function

NR:

description
PREDICTED: tctex1 domain-containing protein 1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220819.1 True 766 mRNA 0.46 5 2291463 2293495

Neighbor

gene id symbol gene type direction distance location
pde4bb pde4bb,LOC107719260,LOC107681771,LOC107593782,LOC107671696,LOC107559365,LOC108430746 coding upstream 25938 2213103 ~ 2265525 (+)
LOC122358163 leprot,LOC107754776,LOC107719262,LOC107681772,LOC107671671 coding upstream 82240 2205194 ~ 2209223 (+)
LOC122358154 LOC107681836,LOC107719284 coding upstream 113298 2173372 ~ 2178165 (+)
LOC122326519 lrp8,LOC107681710,LOC107671705,LOC107719273,LOC107559340 coding upstream 135224 2083675 ~ 2156239 (+)
ebna1bp2 ebna1bp2,LOC107722608,LOC107580944 coding upstream 215426 2072770 ~ 2076037 (+)
bcl6ab LOC107593779,LOC107681786,LOC107559367,LOC107709352,LOC107671762,LOC107719257 coding downstream 16042 2309537 ~ 2316103 (+)
LOC122358683 fam78ba,LOC107593884,LOC107681754,LOC107709346,LOC107671676,LOC105891364,LOC107102035,LOC101481240 coding downstream 29216 2322711 ~ 2327443 (+)
LOC122358767 tsen15,LOC107735630,LOC107681748 coding downstream 97383 2390878 ~ 2391452 (+)
LOC122358704 cmpk,cmpk1,LOC107719256,LOC107681787,LOC107671754,LOC107559368,LOC107709354 coding downstream 134062 2427557 ~ 2431457 (+)
LOC122360901 NA coding downstream 160355 2453850 ~ 2461222 (+)
G8717 NA non-coding upstream 1423 2288825 ~ 2290040 (+)
G8703 NA non-coding upstream 37872 2249222 ~ 2253591 (+)
G8707 NA non-coding upstream 64212 2226905 ~ 2227251 (+)
G8706 NA non-coding upstream 69389 2221708 ~ 2222074 (+)
G8701 NA non-coding upstream 78854 2212258 ~ 2212609 (+)
G8737 NA non-coding downstream 150093 2443588 ~ 2445200 (+)
G8724 NA non-coding downstream 218127 2511622 ~ 2609519 (+)
G8764 NA non-coding downstream 319027 2612522 ~ 2613104 (+)
G8794 NA non-coding downstream 525577 2819072 ~ 2872749 (+)
G8816 NA non-coding downstream 618796 2912291 ~ 2912787 (+)
sgip1b sgip1b,LOC107719259,LOC107593781,LOC107709351,LOC107671695,LOC107559342,LOC107681818,LOC108430747 other upstream 3247 2270679 ~ 2288216 (+)
LOC122358138 LOC107593886,LOC107719261,LOC107671769,LOC107559363,LOC107754779,LOC107681703,LOC106568718 other upstream 100015 2178766 ~ 2191448 (+)
arl14 arl14,LOC107722413,LOC107719289 other upstream 354704 1933512 ~ 1936759 (+)
LOC122360854 si:dkey-119f1.1,LOC107593796,LOC107715495,LOC107719281,LOC107701334,LOC107681697,LOC107593797,LOC108443183 other upstream 380784 1903067 ~ 1910679 (+)
rc3h1b LOC107681708,LOC107560775,LOC107722144 other upstream 731689 1544773 ~ 1559774 (+)
G8725 sec22ba,LOC107681807,LOC107727533,LOC107709355,LOC107671713,LOC107559355,LOC105891393 other downstream 105459 2398954 ~ 2401745 (+)
LOC122358652 slc35a3b,LOC107559354,LOC107593843,LOC107671667,LOC107709347 other downstream 113247 2406742 ~ 2419955 (+)
zgc:55943 zgc:55943,LOC107727521,LOC107671715,LOC107709356,LOC107559369,LOC107593773,LOC108430752 other downstream 254571 2548066 ~ 2555321 (+)
G8760 NA other downstream 298139 2591634 ~ 2592758 (+)
LOC122355548 NA other downstream 323712 2617207 ~ 2669943 (+)

Expression


Co-expression Network