kcnmb3 (LOC107708981,LOC107599858,LOC107681773)


Basic Information

Item Value
gene id kcnmb3
gene name LOC107708981,LOC107599858,LOC107681773
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 1340743 ~ 1345013 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221538.1
GTTTTGTCGCTCACAGTGAATCGTTTAGTCAGCTATAATGCAGAGAAGAACGCATGTCTTGAGGGATGTCTTCTACCAGCAAGCCCATATGCAGGATAATGGAGGCAGGTGGAGGAAAGCGAGGGAGATGAAGTGCAATGAGAAAGCCAGAGCTCAAATCCCAGAGTCCAGCGTAGGAGAAGACAGAGCCATTCTCTTGGGCTTCACCATGATGACCTTCTCCATCCTCATGTACTTTCTGGTAGGAATCGTGATGGTGAAACCAAGTCTGTACAGTGACTGGAAACGTAATAACTGCACGCTGGTGCAGATTGATCTGGTGGATGAAGTGATGGATTGCCGTGGAATCGATAGCTTTAAATGTCTGCGTGTTTTGGTGAACAGCACCCCTGAAAAAACGCATCGACTTTACCACGATGAAGACACCGTCAAAAACAGGCCAAAGTGTTTCTACACTCCGAAATGCCAACGAAATAAGACAGAACAAGAGGAAGAGGCCAATAACATCACGGATGTGTTTGTGAAAGGGGATAATATGGCGTGCTATCTCAGTGCAGCACACCCAAATGACGCCATCTCTAGGAGGAAATACACCGTTCAGATGGCTTTGTACTACCTGCTGTGGCCCAGCCTCATGTTGTTCGGTGGAATCCTGCTGGTGGGGCTGGTGAAGCTCAACCAGCATCTTGCTTTCCTCTGCACTGAGATCACTAGAGAGGAGTTACTGGGCAAGCAGAGTAAACTGACGGAGGGTGGGATCTGCAGGTTCTTCAGATGGAGGTCTGGAGGCCCCCCGGAGCCGACAGAAACAGTCAGATAGTATAATGCGCCCCTACTGCAGTGGGCAGGTTAGTCGTGATATATAATCAATGTCTTATGAAGTTAATGAAGTGCCTTACACTATATTGCCGTagttttttatacattttgagtGTTCGTTAAAATCAAATGAACCATTTCAAGAGGTTATATAGATGCAAGAGAGAATGATCTCAACTGATTTTAGCattagtgaatgggtgccatcagaatgagagccaGCTGATAAAACCAGCAGTCCCATCCAGCCAGTAacattttgtgaagaaaaaagctttttaagtaaactatttttttattttaataacggtgagggggaaaaaatatgtacaaaaaataaataaataaagataatatgCCGACAAAACATTACGATTACtcacatttcttttaaactttaaaaacactatGCGTAATTCAAAATATGAGTGACAAAAAATCATTCACTAATCTATCCCATTTAAAATCCTGATGTTAAATGAACTCTTATTATTCATcgaaaaatatttatgataacaTTCCCAAGGCGTATAGCGGATTAGAAAAGTGTCGAAAGGTTAGAAGTTTTAACGTTTGGATTATATTGCATAATTATTCGctatattgaattattaataaagccCTTCTACAAACAGCACAAACTCCGTCTGGAACAGAGCAGCAGTTCAGAGATTACGATACAG

Function

NR:

description
PREDICTED: calcium-activated potassium channel subunit beta-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221538.1 True 1502 mRNA 0.41 4 1340743 1345013

Neighbor

gene id symbol gene type direction distance location
ephb3a ephb3a,LOC107681809,LOC107599837,LOC107722542,LOC107708817,LOC107656865,LOC108437521,LOC108267069,LOC105889460,LOC102226142 coding upstream 31924 1279837 ~ 1308819 (+)
pls1 pls1,LOC107722705,LOC107656864,LOC107565818,LOC107709028,LOC107681752,LOC108437523 coding upstream 77665 1248218 ~ 1263078 (+)
si:ch211-71m22.1 si:ch211-71m22.1,LOC107722310,LOC107703220,LOC107599861,LOC107558181,LOC107681688 coding upstream 273301 1062189 ~ 1067442 (+)
LOC122357578 LOC107681832,LOC107709017,LOC108437507,LOC103030036,LOC107599862 coding upstream 279469 1052080 ~ 1061274 (+)
LOC122324991 NA coding upstream 301139 1035675 ~ 1039604 (+)
tbl1xr1b tbl1xr1b,LOC107656866,LOC108437519,LOC107568629,LOC103032574,LOC108267995,LOC107722285,LOC106530177,LOC105889501 coding downstream 11227 1356240 ~ 1371916 (+)
b3gnt5b LOC107593805,LOC107709072,LOC107656860,LOC107681747,LOC107568627,LOC107722519 coding downstream 30045 1375058 ~ 1381470 (+)
dcun1d1 dcun1d1,LOC107681826,LOC107568628,LOC107722250,LOC107708830,LOC105889496 coding downstream 45699 1390712 ~ 1396178 (+)
LOC122360630 LOC107681692 coding downstream 95925 1440938 ~ 1447899 (+)
asip2b agrp2,LOC107593895,LOC107715506,LOC107701329,LOC107681750,LOC107722688,LOC107568624 coding downstream 124047 1469060 ~ 1472849 (+)
G8393 dia1a,LOC107599840,LOC107681802,LOC107722302,LOC107565821,LOC107679841 non-coding upstream 137729 1197427 ~ 1203014 (+)
G8394 NA non-coding upstream 154711 1180130 ~ 1186032 (+)
G8222 dnajb4,LOC107681825,LOC107599850,LOC107708915,LOC107566472,LOC107751861,LOC107690981 non-coding upstream 557998 680687 ~ 782745 (+)
G8173 NA non-coding upstream 669180 668304 ~ 671563 (+)
LOC122328698 NA non-coding upstream 695817 643034 ~ 644926 (+)
G8451 NA non-coding downstream 37106 1382119 ~ 1382323 (+)
G8449 NA non-coding downstream 38879 1383892 ~ 1385986 (+)
G8469 LOC107715522,LOC107681815,LOC108437516,LOC108267691 non-coding downstream 62638 1407651 ~ 1425295 (+)
G8508 NA non-coding downstream 254033 1599046 ~ 1673755 (+)
G8519 nos1apb,LOC107715504,LOC107593855,LOC107681742,LOC107560777,LOC107701337 non-coding downstream 287303 1632316 ~ 1636622 (+)
st6galnac5a st6galnac5a,LOC107681827,LOC107708707,LOC107599846,LOC107751866 other upstream 512338 799932 ~ 828405 (+)
LOC122360757 fam73b,miga2,miga1,LOC107599369,LOC107705989,LOC107675762,LOC107737175,LOC107661559,LOC107708777,LOC107681767,LOC107722319,LOC107703235,LOC107558173 other upstream 882998 447162 ~ 457745 (+)
LOC122325097 fuz,LOC107708997,LOC107691039 other upstream 1095379 241451 ~ 245364 (+)
G8167 NA other upstream 1117376 200092 ~ 223367 (+)
ccdc39 ccdc39,LOC107722234,LOC107701322,LOC107708988,LOC107568623 other downstream 52511 1397524 ~ 1408721 (+)
rc3h1b LOC107681708,LOC107560775,LOC107722144 other downstream 199760 1544773 ~ 1559774 (+)
LOC122360854 si:dkey-119f1.1,LOC107593796,LOC107715495,LOC107719281,LOC107701334,LOC107681697,LOC107593797,LOC108443183 other downstream 558054 1903067 ~ 1910679 (+)
arl14 arl14,LOC107722413,LOC107719289 other downstream 588499 1933512 ~ 1936759 (+)
LOC122358138 LOC107593886,LOC107719261,LOC107671769,LOC107559363,LOC107754779,LOC107681703,LOC106568718 other downstream 833753 2178766 ~ 2191448 (+)

Expression


Co-expression Network