si:ch1073-184j22.1 (si:ch1073-184j22.1,LOC107564249,LOC107653514,LOC107705312,LOC107660327,LOC107550431,LOC107724751,LOC108440865)


Basic Information

Item Value
gene id si:ch1073-184j22.1
gene name si:ch1073-184j22.1,LOC107564249,LOC107653514,LOC107705312,LOC107660327,LOC107550431,LOC107724751,LOC108440865
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 5794226 ~ 5800871 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223404.1
taaacacaagacaaacaaaagaAGGGATCCGGAAACTGACTGTAGTAGAGAGACAAGGAgagctggtcagataaatgacCAGGAGGCTGAAAAAGAGACAAAATGACAGGTCAAGATTCAGCAACAGATAGGAGGAGGAGTGCACAAACTTGAAAAAGAGGAGGAGTCTGGTCTGAAAGGAAGCTAAAAAGAGTGGAGCGCGAAAAGGAGACCTTCAAAACAGAGTGATCCTTTCTGAGTGCCCACTGACAAAGATCTGGAATAACCTGGAGTCTGGCAAAGAGGACCTcaaccaaaaaaatattcatcACTGAAGGAATTAccgaaaatataaacacacgGAACTGTGCAAAGGCACCAAGGAGACCAGAAGACAatcaaacattattaaaaccaGAAAGAAGACGTGGAGATACCACCCACAGAGAGAGACTGACAATACCACACACAGGGTTTATCAAAGGTAATCACACCACAACTGAGCAACAGACACTAACCATcaacaaacacgcacacacgcatTCATTTATGGAATACACACCCACATTGTGATTGTAACACATAGGCTGAACATCTCGAGCTTAGAGAGTTTAGACTGTAGTCAGGAGGCATACAGAATCTTGGCTGTCAAAGGGAACGGATTGACTGTGAATGGGTAGAAGCATGGTGAGGCCCTGCGCACAACTCTCTTGGCACTCTGAACACTCTATCCACCAAAATATGAACTGATCTAAGAACCGATTTCTTCTCCATGTCAGAAATCACCTGGGAATTAAAGTATAACATTAGTAGATCACAGACCAAATCATCTTTTTCAAAATCCAGAGCCACCATTAGAGGATTCTTCCTAAAGAGTATTTATGCTTTGAAGAAGCAGCACTCTGATTTCTCACCTCCACTCTTGGATATCCTTCTGAACTAAGGATCGATTCCATCGTGTTACCTACAGGACTTCTGGTCACCTCTCTGTGTTGGAATGGAAATTGTGCACTGAGCTGCTAAGAAGGAGTTGAGTGAGTTAGAAGTTCACCTACACTGCAGCATGAAGCTCAGGAATGGGGCAAGAGGGGCACTACTGGCCTTGCTGCTGAGTTTACTGCTGTCTACCTGCACCACACAAGAGAGTGAGGAGAGTCTGGAGATCCAAGAGGAAAACAATACAGTCAGCACCGAGAGCCCTGATACTGTATCTTCTGACATAACCAACGTGAGTCCCCACAGGACATGGATAGTCTTTAGGGACAACTCCAACAAGGGTGGAAATAAGAAatcaaaaggaaataaaaaactCTCCAAGCATGGCCTCCCAGGTCCACCAGGCCCTCCTGGTCCCCAGGGGCCTCCTGGTCCTCCGGGCCCTCTACTGCCTCATCATTCAGAGTTGATAGAGGACTTCCAAGTAAAACTGAAAGATATGGTAGGAAGTCACTGCCTGCTCTGCGATCAAACCCCTCGTGTGACCACAGCTTTCCGTTGCCGACTGCACCACAACCTGATGGTCCACCGGCGGAGTCTGCAGGAGCTCCAGCCCTTCAATACTCCCTCAAACACAGAGCAATTCCATCAGAGGGGACAGGGCTTTAACGCCAGCAGTGGCCGGTACACAGCTCCAGTGTCTGGCTTCTACCAGCTTACAGCTAGTCTACTACTGGaatccAACGAGTCTCAGAAAAAGCCTCATGCAAGGCAGAGGGACAGTGTTAAGGCCTCAATATGTATAGAGTCTCTTTGTCAAAGTAATGTGTCTTTGGAGACAGTGACTGGAGTGAGCTCTACAGGAGGAGTATTCAGCGTTCTCCTGACCGGGACTCTTTACCTACAGgtTGGAGAGTATGTATCTATTCTTATTGACAATGGGACAGGCTCAGCCCTGACAATTCTCCAAGACAGTCTATTTTCTGGCATTCTTATTGGAGTATGAGGACACAAGCAAAACCCAAACCAATGACTACAAAGAAGcccatttttacagtattgaCGAAATACATATCATTATTAGGTAAGGTATTCAGgacatattagaataataatttcataaaaaggAGGACTCTTTTCAAGCATCTAAAAGAGACTCTGCATATCACCACCGTTGCAAAGGGCAGCAGGATTGCACTGCTATTTCTTTCCAAAATAATAGCAACATTTAAACTCTGTTTATAGAGgtgtatgtattttttccatGTGGTATGTGTATACATTCCATTCTTAACAGGGctgaagttttatttatttgtatttgctttttGAAAGGAAATtgatatttgtgtatatttgcaATAAAATGCTTCCATAACTGCTGAAA
>XM_043223413.1
taaacacaagacaaacaaaagaAGGGATCCGGAAACTGACTGTAGTAGAGAGACAAGGAgagctggtcagataaatgacCAGGAGGCTGAAAAAGAGACAAAATGACAGGTCAAGATTCAGCAACAGATAGGAGGAGGAGTGCACAAACTTGAAAAAGAGGAGGAGTCTGGTCTGAAAGGAAGCTAAAAAGAGTGGAGCGCGAAAAGGAGACCTTCAAAACAGAGTGATCCTTTCTGAGTGCCCACTGACAAAGATCTGGAATAACCTGGAGTCTGGCAAAGAGGACCTcaaccaaaaaaatattcatcACTGAAGGAATTAccgaaaatataaacacacgGAACTGTGCAAAGGCACCAAGGAGACCAGAAGACAatcaaacattattaaaaccaGAAAGAAGACGTGGAGATACCACCCACAGAGAGAGACTGACAATACCACACACAGGGTTTATCAAAGGACTTCTGGTCACCTCTCTGTGTTGGAATGGAAATTGTGCACTGAGCTGCTAAGAAGGAGTTGAGTGAGTTAGAAGTTCACCTACACTGCAGCATGAAGCTCAGGAATGGGGCAAGAGGGGCACTACTGGCCTTGCTGCTGAGTTTACTGCTGTCTACCTGCACCACACAAGAGAGTGAGGAGAGTCTGGAGATCCAAGAGGAAAACAATACAGTCAGCACCGAGAGCCCTGATACTGTATCTTCTGACATAACCAACGTGAGTCCCCACAGGACATGGATAGTCTTTAGGGACAACTCCAACAAGGGTGGAAATAAGAAatcaaaaggaaataaaaaactCTCCAAGCATGGCCTCCCAGGTCCACCAGGCCCTCCTGGTCCCCAGGGGCCTCCTGGTCCTCCGGGCCCTCTACTGCCTCATCATTCAGAGTTGATAGAGGACTTCCAAGTAAAACTGAAAGATATGGTAGGAAGTCACTGCCTGCTCTGCGATCAAACCCCTCGTGTGACCACAGCTTTCCGTTGCCGACTGCACCACAACCTGATGGTCCACCGGCGGAGTCTGCAGGAGCTCCAGCCCTTCAATACTCCCTCAAACACAGAGCAATTCCATCAGAGGGGACAGGGCTTTAACGCCAGCAGTGGCCGGTACACAGCTCCAGTGTCTGGCTTCTACCAGCTTACAGCTAGTCTACTACTGGaatccAACGAGTCTCAGAAAAAGCCTCATGCAAGGCAGAGGGACAGTGTTAAGGCCTCAATATGTATAGAGTCTCTTTGTCAAAGTAATGTGTCTTTGGAGACAGTGACTGGAGTGAGCTCTACAGGAGGAGTATTCAGCGTTCTCCTGACCGGGACTCTTTACCTACAGgtTGGAGAGTATGTATCTATTCTTATTGACAATGGGACAGGCTCAGCCCTGACAATTCTCCAAGACAGTCTATTTTCTGGCATTCTTATTGGAGTATGAGGACACAAGCAAAACCCAAACCAATGACTACAAAGAAGcccatttttacagtattgaCGAAATACATATCATTATTAGGTAAGGTATTCAGgacatattagaataataatttcataaaaaggAGGACTCTTTTCAAGCATCTAAAAGAGACTCTGCATATCACCACCGTTGCAAAGGGCAGCAGGATTGCACTGCTATTTCTTTCCAAAATAATAGCAACATTTAAACTCTGTTTATAGAGgtgtatgtattttttccatGTGGTATGTGTATACATTCCATTCTTAACAGGGctgaagttttatttatttgtatttgctttttGAAAGGAAATtgatatttgtgtatatttgcaATAAAATGCTTCCATAACTGCTGAAA

Function

symbol description
si:ch1073-184j22.1 Predicted to enable hormone activity. Predicted to be active in extracellular space. Orthologous to human ERFE (erythroferrone).

NR:

description
erythroferrone-like

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223404.1 True 2302 mRNA 0.44 8 5794226 5800871
XM_043223413.1 False 1816 mRNA 0.44 9 5794226 5800871

Neighbor

gene id symbol gene type direction distance location
gnb4a LOC107705311,LOC107653516,LOC107564248,LOC108440866,LOC107724752,LOC107660315,LOC103030165,LOC107550449 coding upstream 14633 5765068 ~ 5779593 (+)
pex5lb pex5lb,LOC107564246,LOC107653517,LOC107660316,LOC107550448,LOC107724753 coding upstream 30367 5730605 ~ 5763859 (+)
foxf2a LOC107671725,LOC107745889,LOC107563086,LOC107685282,LOC107724048 coding upstream 902465 4888123 ~ 4891761 (+)
LOC122328338 foxq1,LOC107685281,LOC107745888,LOC107563088,LOC107671726,LOC107724052 coding upstream 908261 4884610 ~ 4885965 (+)
si:ch211-241e1.3 LOC107671555,LOC107705144,LOC107708592,LOC107565521,LOC107671659 coding upstream 1244623 4540052 ~ 4549603 (+)
sft2d3 sft2d3,LOC107705299,LOC107653510,LOC107737414 coding downstream 6300 5807171 ~ 5808548 (+)
LOC122361161 NA coding downstream 35777 5836648 ~ 5838633 (+)
trnag-gcc_1 NA coding downstream 168779 5969650 ~ 5969724 (+)
trnag-gcc_2 NA coding downstream 170648 5971519 ~ 5971593 (+)
trnag-gcc_3 NA coding downstream 173844 5974715 ~ 5974786 (+)
G9671 NA non-coding upstream 69210 5724701 ~ 5725016 (+)
G9663 NA non-coding upstream 76820 5717178 ~ 5717406 (+)
G9660 NA non-coding upstream 88341 5702617 ~ 5705885 (+)
LOC122357632 NA non-coding upstream 186801 5604474 ~ 5607425 (+)
G9632 tfr1a,LOC107705306,LOC107653522,LOC107564243,LOC107728405 non-coding upstream 202639 5577466 ~ 5591587 (+)
G9690 NA non-coding downstream 31486 5832357 ~ 5832690 (+)
G9692 cldn15la,LOC107737418,LOC107550432,LOC107695160 non-coding downstream 51398 5852269 ~ 5859952 (+)
G9697 NA non-coding downstream 341171 6142042 ~ 6142865 (+)
G9758 NA non-coding downstream 575272 6376143 ~ 6376597 (+)
G9825 NA non-coding downstream 701519 6502390 ~ 6502594 (+)
G9630 LOC107705308,LOC107564255,LOC107728403 other upstream 184950 5608327 ~ 5609276 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other upstream 883050 4909129 ~ 4911176 (+)
LOC122361055 LOC107565287,LOC107667819 other upstream 894846 4898372 ~ 4899380 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other upstream 1204399 4572945 ~ 4589827 (+)
G9416 wrnip1 other upstream 1224132 4563897 ~ 4570094 (+)
dusp28 dusp28,LOC107737412,LOC107695162,LOC107653509,LOC107705300,LOC107564257 other downstream 23122 5823993 ~ 5826286 (+)
trnag-gcc_20 NA other downstream 419555 6220426 ~ 6220500 (+)
trnag-gcc_21 NA other downstream 421574 6222445 ~ 6222519 (+)
sst2 LOC107549725,LOC107710806 other downstream 566306 6367177 ~ 6367954 (+)
G9887 NA other downstream 889501 6690372 ~ 6690779 (+)

Expression


Co-expression Network