asip2b (agrp2,LOC107593895,LOC107715506,LOC107701329,LOC107681750,LOC107722688,LOC107568624)


Basic Information

Item Value
gene id asip2b
gene name agrp2,LOC107593895,LOC107715506,LOC107701329,LOC107681750,LOC107722688,LOC107568624
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 1469060 ~ 1472849 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043253906.1
ATTTATCACCTTTCTTGCGTATTCGTGTTTTAATGCACCGCAGGGGATCGCGCCGTCGATTGGCAACACACCGCGTTCGTGGCGCAGTGATGGACTTTGGCCGAGCGTTGAATGAGGAGCGCCGTCTCGGAGTGGGCGTGGGTGAGTTCGGGCTTTATAAACGCGGAGAATGGGCTTCAGCGCGGACCTCACTTGTTGAGTGATCTCTGGGAGGACAGTCCGACGCGAACCCGACACGCCTAAACTCTCCGCTCGATCGCAAAATGACGGCGGCGCTGGTGAAAGGATTTGTGCTGTTCGTCTGCTTGTTCTTCACAGTTGTTCAGTCCATCACGTGCGAGGCGAACAGGATAGATGCGCGCAAAAAGCACGAAAACGACGTGGCGCACCACGGCTCTGCCACAACAGCAGGAGCGTGGAATCAGGAGAAGCCGAAGAGACTCTTTGCCAGGACTCGCTATCTGTCTCAGCAGAGACATCATGTGGTGAGACCTAAGCCCAGGCCTGAGGCGGTATCTCCAGCCCAGACTCCAGCGCGGCGCTGTGCCGGTCTGATGGAGAGCTGCTCCCCGCTCACTCCCTGCTGTGACCCATGTGCTTCCTGCCACTGCAGGCTCTTCAACACCATCTGTCACTGCTGGAGACTCGGACACCTCTGCCCCAAGAAGACCTAACCACCCCAGACGGCGCTTCTCAGCTGCTTTCACTTTAGCTGCGCACATCGGACATCAAATGTTGTTAAGCATACAAAAAAGTTGCTTAGTGGTTCGTTTAGAATTCTTGTTTGATGGTGTCTTGTCCCAATATTTCAACAATTCACCATACAAAGCGGTGATGACTAAACTGACTCGCTCCTACCAAGGCTGTGCCAAGATACTGCTAGGGTCTCCTTAGATGTTCAAGGAATATTCCGTACAACCGGCGCGATGTCAATTACCGCGAATGATCTTTAGaggtttttctttaaaagccaATTTTTGGAAGATTTAAAAGCTTTGAAGCTTGCGATTTTATAAAAGCTCCTGCATATCTCTTTCTGTTAAAAGCTTTGTTATAAGAGCTGTGAAGctgtttaagtcatttttatagtcattttaaGCTTCACGAATTTACGAGTTGCGAAACTGGAAAGGGCCGTAGAGGTTAGCGAGTGACTAAaatcatataaacacacatataaacactcGTCTCCATTTGCTCTCCGGGACAAGCGGAGATTCGTATTTGTGGTAATAAACAATggagtttttaataaaacaaacggAAAGCATTTTGGGTAttctttacaataaggtttcaTTTTGTTAGCACGAGCTTACagtgcaaataatatttattcgTCTCGGTTAATGCTCACTAATCAGAATCATTTAACGTTAATGAAACATTacatgattaataaatgctgcaacAAACTGCTCGTTATTAGTTCAACTGTAACTAATtggaccttattgtaaagtgttaccggctttatttttgtctctcgcgttatcaaatatttgttcagAACAGATCCATATGAGAAGCACCGTTACGTAAGACGCACATGCAGCTGCGCACCATCATGATTTATACCTGTGCTCCTTCACGCTCTCATACCGCTATATAGCGCACCACGGATCGTGACATTTAACCATGCATTGAATGCTTAACATCCGTACGACTCGAGTTATTCGCACACGTTTGACACTATTACCACTCATCCGCCCACCGGAGATCTTATTAgagttacatttttgttattattctcAATATTTTCCAACCCTTGGTAAGCAAGGGGCATATACCGCTTAACTCGTACAGAATCAGCGTAACAGTGCctgaaaaagctttaaataagtCAAAATGTGAATCTAATGTCGTCTTCATACTGTGATCTTTGAATAATACGTTTTAAGACGCTCATTTCTACTGTGATGATTCCACTGGTTTCTACACACACGAGAAAAGCATACGTGGACGTCATGTAGACGCTATTGTGGATGAAAAGCTTCTTTGAGAAAAGTTGTCATCGTTACGCAATATATTTCTATCCACTGTCAGGTCATATTGACTGAATAttattgggggaaaaaaagaaaagaaaaacatgttcaaTGTGCttctttgtaataaaaatgtttagatcTGCA

Function

NR:

description
agouti-related protein-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043253906.1 True 2135 mRNA 0.44 3 1469060 1472849

Neighbor

gene id symbol gene type direction distance location
LOC122360630 LOC107681692 coding upstream 21161 1440938 ~ 1447899 (+)
dcun1d1 dcun1d1,LOC107681826,LOC107568628,LOC107722250,LOC107708830,LOC105889496 coding upstream 72882 1390712 ~ 1396178 (+)
b3gnt5b LOC107593805,LOC107709072,LOC107656860,LOC107681747,LOC107568627,LOC107722519 coding upstream 87590 1375058 ~ 1381470 (+)
tbl1xr1b tbl1xr1b,LOC107656866,LOC108437519,LOC107568629,LOC103032574,LOC108267995,LOC107722285,LOC106530177,LOC105889501 coding upstream 97144 1356240 ~ 1371916 (+)
kcnmb3 LOC107708981,LOC107599858,LOC107681773 coding upstream 124047 1340743 ~ 1345013 (+)
zgc:153115 zgc:153115,LOC107722210,LOC107701340,LOC107681793,LOC105889440,LOC105030379,LOC106568757 coding downstream 44848 1517697 ~ 1525574 (+)
extl2 extl2,LOC107722455 coding downstream 90156 1563005 ~ 1568542 (+)
LOC122361145 dbt,LOC107681723,LOC107715513,LOC107593857,LOC108411488 coding downstream 119144 1591993 ~ 1598263 (+)
rgs18 rgs18,LOC107681733,LOC107715502,LOC107701327,LOC107560778,LOC107722673 coding downstream 375237 1848086 ~ 1855235 (+)
rgs1 LOC107681696,LOC107560781,LOC107701325,LOC107722662 coding downstream 391656 1864505 ~ 1867191 (+)
G8469 LOC107715522,LOC107681815,LOC108437516,LOC108267691 non-coding upstream 43765 1407651 ~ 1425295 (+)
G8449 NA non-coding upstream 83074 1383892 ~ 1385986 (+)
G8451 NA non-coding upstream 86737 1382119 ~ 1382323 (+)
G8393 dia1a,LOC107599840,LOC107681802,LOC107722302,LOC107565821,LOC107679841 non-coding upstream 266046 1197427 ~ 1203014 (+)
G8394 NA non-coding upstream 283028 1180130 ~ 1186032 (+)
G8508 NA non-coding downstream 126197 1599046 ~ 1673755 (+)
G8519 nos1apb,LOC107715504,LOC107593855,LOC107681742,LOC107560777,LOC107701337 non-coding downstream 159467 1632316 ~ 1636622 (+)
G8556 NA non-coding downstream 208578 1681427 ~ 1683093 (+)
G8585 LOC107701323,LOC107593893,LOC107719279,LOC107560771,LOC107722646 non-coding downstream 445857 1918706 ~ 1919313 (+)
G8586 NA non-coding downstream 446563 1919412 ~ 1922223 (+)
ccdc39 ccdc39,LOC107722234,LOC107701322,LOC107708988,LOC107568623 other upstream 60339 1397524 ~ 1408721 (+)
st6galnac5a st6galnac5a,LOC107681827,LOC107708707,LOC107599846,LOC107751866 other upstream 640655 799932 ~ 828405 (+)
LOC122360757 fam73b,miga2,miga1,LOC107599369,LOC107705989,LOC107675762,LOC107737175,LOC107661559,LOC107708777,LOC107681767,LOC107722319,LOC107703235,LOC107558173 other upstream 1011315 447162 ~ 457745 (+)
LOC122325097 fuz,LOC107708997,LOC107691039 other upstream 1223696 241451 ~ 245364 (+)
G8167 NA other upstream 1245693 200092 ~ 223367 (+)
rc3h1b LOC107681708,LOC107560775,LOC107722144 other downstream 71924 1544773 ~ 1559774 (+)
LOC122360854 si:dkey-119f1.1,LOC107593796,LOC107715495,LOC107719281,LOC107701334,LOC107681697,LOC107593797,LOC108443183 other downstream 430218 1903067 ~ 1910679 (+)
arl14 arl14,LOC107722413,LOC107719289 other downstream 460663 1933512 ~ 1936759 (+)
LOC122358138 LOC107593886,LOC107719261,LOC107671769,LOC107559363,LOC107754779,LOC107681703,LOC106568718 other downstream 705917 2178766 ~ 2191448 (+)
sgip1b sgip1b,LOC107719259,LOC107593781,LOC107709351,LOC107671695,LOC107559342,LOC107681818,LOC108430747 other downstream 797830 2270679 ~ 2288216 (+)

Expression


Co-expression Network