pth1r (pth1r,pth1ra,LOC107660418,LOC107671674)


Basic Information

Item Value
gene id pth1r
gene name pth1r,pth1ra,LOC107660418,LOC107671674
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 3813313 ~ 3875726 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254140.1
TTCGGCGAGGGTTACCGACGTCCGCCGTCCGGAGCCGTTCTGTCAGCGAGGACCGCTAAACTTACGATCGTGAAAGACACGCTGAACTTCTTCAGCTGCGGCTCGACGTTAAACGTGAAGTAGACGTAGACtctttcctgaaaaaaaaatcccatttacCTACTTTGTCACAGTTAACGTTAGCGCCGTCGCTTTAACGCGGCTGTCAGATCCACGGCGAGCATGTCAGTCTAGCAGATGCTAAACTTCCAGTTCGTTTCGAAACGGCAAATGAGTCACGTTTGCAATCACTAAGAAGTGACATGTTTCACCGGAGACgcttaaactgaaaaaaaggatttttttcccccctttatTGTGGCGCGCGTTTCTGTTAGACTCGCCGCGTCGCTCCATCAGTCTCCGTTAAAACCGTTTCTTTCGCCGTTTTTGATGTcccgagagaaaaaaaacgaagGCTGAGCCTGAGGGACACCGCTTTATTatgtcgctttttttttttttttacggcgAGGCTGAAGGGAAATTTAAAgacctaaaaataaagtgtcgGTTTCTACTCCACAAAGAATCATTTGAACTTCCTACCGCAGAAGGAGCGGGACGTAAATAGTTCTGACATGTGGAtgtaatttcagaaaaaaagaggcAGACAGATGCAGAGAAATAAAACGcgagcggagagagagagagagagagactggggACAGTTTGAATCGAGCCTGCGAGGAAAAGCCGTgagaaaatattcataattttacaAGCAGGCGATGTAATGGGAGGGGAGCGGACAGAGGAGAAATGACTGGCTCTTTTTAACACAAGTAAACACCAGAGAAAGCCCATTCAAGCTGACATCGGTCCGCGCGAACTTGTCGGGATGGGAGCCACGCTCATAGTACACACTTTAGGTTTAGTCTTTTGCGGCACCTTGCTGAGTTTCGTCTACGGTCTGGTTGATGCTGATGATGTCCTCACTAAAGAAGAACAAATGTATCTTCTGTtcaatgcaaaaagaaaatgcgAGCGAAACATCAAGTCCAAACATAAAATCCCCGAGGGTTACTGCATGCCGGAGTGGGATGGCATCGTTTGCTGGCCCGAGGGACTTCCTGGAACGATGGTGTCCACTGCCTGCCCGGAGTACATATATGACTTCGACCACAAAGGTCAGGCGTACCGGCGCTGTGACTTCAATGGGACCTGGGAGCTGGCCTCAAATAACAACAAAACCTGGGCTAATTACAGCGAGTGCGCCAAACACCTCGGCAGTATTCCCCCGGTCCAAGAGAGGGAGGTTTTTCACAGACTTTACCTGATCTACACGGTGGGCTACTCTATCTCTCTGGGATCACTTATGGTGGCGACAGTCATCCTAGGATACTTTCGgAGGCTACACTGCACCAGAAACTACATCCACATGCACCTGTTTGTATCGTTCATGTTGAGGGCCATTAGCATATTTGTGAAAGACGTGGTGTTGTACTCTGGTGCCGCTCTGCAGGAAATGGACCGCATCACCGTGGAGGATCTCAAATCCATCACAGAAGCCCCTCCTGCCAACAAAAGCAAGTTTATTGGCTGTAAGGTGGCTGTCACCCTCTTCTTGTACTTCTTGGCGACCAATTATTACTGGATTCTGGTGGAAGGCCTGTACCTGCACAGCCTTATCTTCATGACCTTCTTCTCAGACAGGAAGTACCTTTGGGGCTTTACTCTGATAGGCTGGGGTGTTCCTGCGATGTTTGTGACCATCTGGGCCAGCGTGAGAGCCACTCTTGCTGACACCGAGTGCTGGGATTTAAGCGCAGGAAACCTGAAATGGATAGTGCAGATCCCTATTCTGTCAGCAATTGTTGTCAATTTTTTGTTGTTCCTGAATATAATTAGAGTCTTGGCAACAAAACTAAGAGAAACAAATGCAGGAAGATGTGACACGAGGCAACAGTACAGGAAGCTGTTAAAATCGACGCTGGTCCTCATGCCGTTGTTTGGGGTTCACTATATTGTGTTCATGGCGATGCCCTACACAGAAGTGTCTGGGGTGCCGTGGCAAATCCAGATGCATTATGAAATGCTCTTTAACTCATTCCAGGGATTCTTCGTTGCAATTATATATTGCTTCTGCAATGGAGAGGTCCAAGCAGAAATCAAGAAGTCGTGGAGTCGGAGGACGCTCGCTCTGGACTTCAAGAGAAAAGCCCGGAGTGGCAGCAACACGTATAGCTACGGACCCATGGTGTCTCACACCAGTGTCACAAACGTGACCGCCCGGGGCCCTCTGGCCCTGCACCTCACCACCCGCCTGGGGCCCGTCTCCCTCAACGGCCACCGGAACCTCCCGGGATACGTGAAGAACGGCTCGGTCTCGGAGAACTCCATCCCGTCCTCGGGTCAGGAGCACAACATACAAGAGGAAGAACCTTCGAAGAACTTCCAGGTGGAGAAAACCATCCCGGTGGTGGAGGAGGAAAGAGAAACAGTCATGTGACTTCACAAAGCCCTTAATAAAGACGATGAAAGGATTGGAGAGTCCTTTGTTTCTCAGGATTTCCTCACAATTTGGATTGTGGGACCATCTCAGTTGGACCTAACGGACCAGGTGCGATCCGTGTCTTTTAAATGAGCCACAATGTTCTTGCGAGACCGGAAGCTATTACAGGCACCAGGCCATCTTCACCAGCAGTATTCGGAGGATGAACGCTTTGTGATGCCGTCACATCACCTCCTTATAGATGAAGAGCGGTGAGTTTGCTTCAGGATCAAGTCGTATGAAATATATGACGCTGTGGACCGTGAATTGTAAATAAGACACTCGTcgtatttcaaaatatatatatatatatatataaaaatgtttttgatcagCACTAATATAATGTTGTTACACAGATGCGACTGCCAGTAGGGACGATCTTTGTATTATGATAGCAGGTTTGTGTTAGTGCAATGTGATATTTATATGTCTGTTGTGTCTCGTTTATCCATGTGTTTCAATCTCTTTTCTCCTCATGATTGAATTCCCTCAGAATCTGTGTAGAATTCTGCAGCACAAGCTCGCATCGTCACCTTTTTAGGACCAGAACATACCATTCTAAGCGTAGAGGAGGTTTTTTTATCTCCTGGATAACTTTTGGCTGCCTTAACCATCGCATAGCGTATTTTATAATGCTGTTAGCTGCTGCCGTTTTTATCACCCAAAGTGGGAAATCGTCTCATTGTCTGAACATGCACATGCAAAACAATAGTTCTTATTAACAGCCCGCGTGATACGAAGCGTCATATCTAAAGCACAAACAGACACTTAGTATTTAAAGTGTGCATTAACCCTGCAGCAATAGCACTATTAATTATTGCATTACATAACAGATTATTACAGTTTGCATTCAACAGGAAttgttgaaatatttgtataaatatactgATCTGTtaagtaggattttttttaaataatgcattaatgcaaattattacattatctTATGAGACATCCTTTGGCGGTATTCTTTTTCACGATTTCAAGTGTGAGGCTTTGGATGAAtcaaaaatgaactaaatgaatTTTCAGGGAAATCTTTATTAAAGGCACCATGAGAGCCGTTCTCTGAAAACCCctatacattattatacattatcCTCATTATCGTATAATGAATGACTcgtatttttcacattttgactTCAACCTAAAAAGGCTTTCGTTATAGCTGTTCATGCTTCACTCCACTGCCTCGCATTACATTCAGTCGTTTCGTGCATTACTGTATACGAGAAGCTGGAAATCATTTTTTACAGCCACAAGGAAGAACAAATCGAAGTCAGTATTGTAGGTTTAGAGGGTCAGGGTCtgttatgtataatataatgctGCTTTTTGTTACTCCATGTATGTATGTCAATATCGTGTTTACACATTGCATAAAAATGCCCACACAGTTATGAGCTATATGTCTGAGAATGTAATACTGATATGGAAAGAGTGTTACCTAGGTTACTATTTATATGCTGGTAGTGCATTATACGGCAGTGctgaaaaaaagactaaattcAGATGGTTTTTATATGCTAGTCAATAAATTCAAAACGTTACTtaacaaaataaactataaatatgcATTCTGCTTTTCTTTACACAACAGCTTGAGGACAGAtcaaaatgacatgtttttgccattaaatgtaatctattattttcagttatgttatttatgaaatgtcatccgttttttgcactttttatgcCTTGGTACATTGATTTGAGACTTTTTTTAGACATTAACAGGGATTGATTCGAAAATAACTGCTTGAACGGTGGATGTgcagttttataaatattgagaTTTTGTGACAGACCAAGAAATTGATCTTATTTGACTGCTTTGaatatttctgtgcattttaatacatgtttttactaCATCCCATCCTTCATGTCGTCAGTAGAAGCAGCAGCAAAATCGTATTTTACCCAAAAACGAATGCTCTTTCTGCAGTGGACcacctttaaaatattttttaaaatattttttttgttttttgtttttttatgttgtttatatatgttcCATAAATGCTTTTCTATGTACACCAGTGTTGTATATTTTAGTGTTGATCATGTGTATCATgtgaataataaatgcaaatgtataatAACAGAGAATCATTTATTGtccatatttacaataatttacaataaaataaatatg

Function

symbol description
pth1r Enables parathyroid hormone receptor activity and peptide hormone binding activity. Acts upstream of or within dorsal aorta development and positive regulation of inositol phosphate biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including bone tissue; gill; liver; opercular flap; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in Eiken syndrome; Jansen's metaphyseal chondrodysplasia; chondrodysplasia Blomstrand type; osteochondrodysplasia; and primary failure of tooth eruption. Orthologous to human PTH1R (parathyroid hormone 1 receptor).

NR:

description
parathyroid hormone/parathyroid hormone-related peptide receptor-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004991 parathyroid hormone receptor activity molecular_function

KEGG:

id description
K04585 PTHR1; parathyroid hormone receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254140.1 True 4706 mRNA 0.42 13 3813313 3875726

Neighbor

gene id symbol gene type direction distance location
usp14 usp14,LOC107660400,LOC107711695,LOC107671702,LOC107727520,LOC102778130 coding upstream 148921 3658015 ~ 3664392 (+)
LOC122362766 LOC107660396,LOC107727523,LOC402879,LOC107593822 coding upstream 223181 3585341 ~ 3590132 (+)
serbp1b serbp1b,LOC107660393,LOC107567863,LOC107671652 coding upstream 229273 3575656 ~ 3584040 (+)
zyg11l LOC107671664,LOC107574786,LOC107711672 coding upstream 250443 3550235 ~ 3562870 (+)
guk1a LOC107727516,LOC107711703,LOC107593754,LOC107661890,LOC107574785 coding upstream 290537 3512889 ~ 3522776 (+)
slc22a23 LOC107705121,LOC107660403,LOC107708605,LOC107671742,LOC107573857 coding downstream 75557 3951283 ~ 3991543 (+)
tubb2 LOC101473957,LOC100702414,LOC107660405,LOC108239677,LOC103371147 coding downstream 117665 3993391 ~ 3997726 (+)
LOC122323258 LOC107660407,LOC107671708,LOC107705103,LOC107562845 coding downstream 178298 4054024 ~ 4149787 (+)
prkacbb prkacbb,LOC107600310,LOC107705125,LOC107660409,LOC108411205,LOC103034112,LOC106599750,LOC108267323 coding downstream 284430 4160156 ~ 4171747 (+)
LOC122361024 dab1,c8b,LOC107671700,LOC107562846 coding downstream 303728 4179454 ~ 4217008 (+)
G9235 NA non-coding upstream 28018 3784917 ~ 3785295 (+)
G9234 NA non-coding upstream 28646 3784339 ~ 3784667 (+)
G9232 NA non-coding upstream 32535 3780540 ~ 3780778 (+)
G9142 LOC107579015,LOC107671680,LOC107711685 non-coding upstream 240238 3572437 ~ 3573075 (+)
G9141 NA non-coding upstream 249074 3563708 ~ 3564239 (+)
G9241 NA non-coding downstream 10356 3886082 ~ 3916483 (+)
G9302 LOC107600331,LOC107705102 non-coding downstream 137380 4013106 ~ 4021316 (+)
G9304 NA non-coding downstream 139724 4015450 ~ 4060976 (+)
G9305 NA non-coding downstream 143613 4019339 ~ 4019715 (+)
G9362 NA non-coding downstream 347865 4223591 ~ 4224111 (+)
LOC122355245 crhr2,LOC107593817,LOC107660401,LOC100335005,LOC107671670 other upstream 22974 3756171 ~ 3790339 (+)
G9173 NA other upstream 134379 3676425 ~ 3678934 (+)
G9154 rock1,LOC107671690 other upstream 196270 3615482 ~ 3617043 (+)
gpr158b gpr158b,LOC107593759,LOC107711710,LOC107671743,LOC107727549 other upstream 648490 3123124 ~ 3164823 (+)
kdsr kdsr,LOC107681813,LOC107727538,LOC107671756,LOC102792240 other upstream 1073406 2729636 ~ 2739907 (+)
G9361 NA other downstream 346513 4222239 ~ 4223112 (+)
G9416 wrnip1 other downstream 688171 4563897 ~ 4570094 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other downstream 697219 4572945 ~ 4589827 (+)
LOC122361055 LOC107565287,LOC107667819 other downstream 1022646 4898372 ~ 4899380 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other downstream 1033403 4909129 ~ 4911176 (+)

Expression


Co-expression Network