zgc:153615 (zgc:153615,LOC107747506,LOC107691014,LOC107708656,LOC107599852,LOC108430722,LOC103026425)


Basic Information

Item Value
gene id zgc:153615
gene name zgc:153615,LOC107747506,LOC107691014,LOC107708656,LOC107599852,LOC108430722,LOC103026425
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 648984 ~ 654781 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254654.1
TTGCGCGTGCACTCCCTCCTCCCCCCTCctttcatgtgtgtgtgatgctggtCTCAAGGGTGTAGCTCAGACACTGCAGTAGAAGGTAGGGCTTGGCTGCTGCACTATACAATGCGCTGAAAGATGGTGCACCAGGAGAAATGTGTTTACCAGGCCCAGAGGAATGAGAGGGAGTCCATTAGGCAGAAGCTGGCCCTTGGCAGTTTCTATGACGACGGACCGGTTACCTTTACTGGCTGCAGCAAGAGCAGCAAGAATTGCCTGTCCTCACGGCTTCAGAATGGGGTGAATCTACAGATGTGCTTTGTGAATGACAGCAGCAGTGACCGAGACAGTGATGCAGAGGACAGCAGGACAGAGACCAGCTTGGACACCCCATTGTCACCTATGagcaaacagagtTCCTCTCTGTCTGACCGGGATACGGGAGAAGAAGACCTGGACTCTGAGGATTCAGAGTTCTGGCGGTTACAGCGGCGGTTGCAGGAAGAGGCCCGTGTAGCTCTGGCCTTGGCCCGTCCCATGGCCCGCATGCAGGTGGAGGTGGAGAGACAGATCCAGCTACACCGCAGGTCCCCCGTGGCAGACCTGTTACCACATCTGCCCCACATCAGTGAGAGTCTAATGAAGAGGAATCTGAGGCCTGTGGACCTGAGAGATATGAGTCTTGGTCAGTTACAGGTCATCACCAATGATTTGCACTCTCAGATACAagGTCTGAATGAGGAGCTGGTTCAGCTGTTGCTCATGAGAGATGAGCTACACATGGAACAGGATGCCATGCTGGTAGATGTGGAGGATCTAACCAGGCATGCACATAGCCAGCAGAGGCACATGACAGAGAAATCTGTGAGCAAGGGTAAAGCAGCTTGCCACGGTCGCTGTGATTCTCCATTTTGAGGCAAGCGGCGCAGGTTCCGACCTCTTGTGTTTCACTATATGACGAAGCAGTGTACTCACTATagatcctttttatttatttttttcaactagatgtgtgtgttttgcctACGTTTCAAGCTTCGTGTGGATGTATGTTAATTATACATGCTGTAAGTGTTCGTGCATGCCCACACCTTAGCTGAGGGTTACACACTCACTTTGTCTATCCTTCATAATGTAGAAATACAGCAAGAATCGATCACTGACGGGCTGGATCTTTTCCCTGTACAAAATATCTGCTGGTTTCACGATACTGAATGAGAATGGACACAAACAGCTCTACAGCGGGAGgctagttcacccacaaatcataatttattcaccttcatgtcaatctttaagaagaTTCGCAAAGGATGTTTCGGAGCTGTTTTTGcccatacagtgaaagtcaatgggatCCAAAGCAGCATTAGACCCCGGCGACTTTCATgttagaaatatttcattttccacAGAGAAAGGAAAGTTATTCAGGCATTcgtttttaggtgaactatccatcAGCTGGTAAACTGCTTCTCTGTGCAGATCATTCACTTATTAACCTTCTGAAGTTTACTCTACTCTAAAGTTTTACTCTGACGCGGTGTTTGCACTGGCTGATGTGCTGTGTATGGAGCTCTCCTAcctaaaatataatcaaaatgttatttgtttgaAGCTGCCTGGTGTGGTGGTAATGAATTCTTGTGTTCACAATGAACTATTAACGTCAGTCTTTTAAGAATGTCtattttacttactttttcATCCAAATGTGGCATTTCCTGTTTCACGGATGTAAGTGACACAACATGGTTGAAATGCTGTATATCTTTGTGCACAgaactgtaaaatgaaattatgaacAAATAAAGGACTTAATATGGGCCATGAAA

Function

symbol description
zgc:153615 Predicted to be involved in positive regulation of hippo signaling. Predicted to be active in cell junction and plasma membrane.

NR:

description
PREDICTED: schwannomin-interacting protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254654.1 True 1823 mRNA 0.46 7 648984 654781

Neighbor

gene id symbol gene type direction distance location
LOC122325155 selt1a,selenot,LOC107681817,LOC107708642,LOC106599070 coding upstream 39817 605086 ~ 609167 (+)
LOC122325106 pter,LOC107681810,LOC107599857 coding upstream 83994 559979 ~ 564990 (+)
LOC122325174 NA coding upstream 408588 238742 ~ 240396 (+)
LOC122325083 erich6,LOC107681751,LOC107708872,LOC107708884 coding upstream 415574 224016 ~ 233410 (+)
wu:fi34b01 NA coding upstream 473976 171622 ~ 175008 (+)
zmp:0000001127 NA coding downstream 3976 658757 ~ 662000 (+)
txndc12 txndc12,LOC107708672,LOC107681819,LOC107690994,LOC107599851,LOC107566463,LOC107739415 coding downstream 9010 663791 ~ 667351 (+)
slc25a24l slc25a24l,LOC107708925,LOC107681683,LOC107751862,LOC107566460,LOC107599866 coding downstream 30442 685223 ~ 692838 (+)
cope cope,LOC107709006,LOC107690966,LOC107681743 coding downstream 38436 693217 ~ 696664 (+)
st6galnac3 st6galnac3,LOC107599847,LOC107681790,LOC107558185 coding downstream 51770 706551 ~ 776800 (+)
LOC122328698 NA non-coding upstream 4058 643034 ~ 644926 (+)
LOC122325219 NA non-coding upstream 14218 634151 ~ 634766 (+)
LOC122325212 NA non-coding upstream 26376 142976 ~ 622608 (+)
G8173 NA non-coding downstream 13523 668304 ~ 671563 (+)
G8222 dnajb4,LOC107681825,LOC107599850,LOC107708915,LOC107566472,LOC107751861,LOC107690981 non-coding downstream 25906 680687 ~ 782745 (+)
G8394 NA non-coding downstream 525349 1180130 ~ 1186032 (+)
G8393 dia1a,LOC107599840,LOC107681802,LOC107722302,LOC107565821,LOC107679841 non-coding downstream 542646 1197427 ~ 1203014 (+)
G8451 NA non-coding downstream 727338 1382119 ~ 1382323 (+)
LOC122360757 fam73b,miga2,miga1,LOC107599369,LOC107705989,LOC107675762,LOC107737175,LOC107661559,LOC107708777,LOC107681767,LOC107722319,LOC107703235,LOC107558173 other upstream 191239 447162 ~ 457745 (+)
LOC122325097 fuz,LOC107708997,LOC107691039 other upstream 403620 241451 ~ 245364 (+)
G8167 NA other upstream 425617 200092 ~ 223367 (+)
st6galnac5a st6galnac5a,LOC107681827,LOC107708707,LOC107599846,LOC107751866 other downstream 145151 799932 ~ 828405 (+)
ccdc39 ccdc39,LOC107722234,LOC107701322,LOC107708988,LOC107568623 other downstream 742743 1397524 ~ 1408721 (+)
rc3h1b LOC107681708,LOC107560775,LOC107722144 other downstream 889992 1544773 ~ 1559774 (+)
LOC122360854 si:dkey-119f1.1,LOC107593796,LOC107715495,LOC107719281,LOC107701334,LOC107681697,LOC107593797,LOC108443183 other downstream 1248286 1903067 ~ 1910679 (+)
arl14 arl14,LOC107722413,LOC107719289 other downstream 1278731 1933512 ~ 1936759 (+)

Expression


Co-expression Network