b3gnt5b (LOC107593805,LOC107709072,LOC107656860,LOC107681747,LOC107568627,LOC107722519)


Basic Information

Item Value
gene id b3gnt5b
gene name LOC107593805,LOC107709072,LOC107656860,LOC107681747,LOC107568627,LOC107722519
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 1375058 ~ 1381470 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255802.1
CGAGCGTCTCCTTTAACGTGAATTTAAACAAATACGGGAGTGTCCTTCATTACTCAAATGCCCTCAGACTTCGTGGTTGGGTCACTTTTCAACTTCTACAGGACAGGCTTCGCCACAGAGCAAAGAAATGCTGGTCGCGGATGTCTCGAACCGGTTTCGTGAAGAAAGTTAATGTTTAGACCGCGGGGACCCACTTTATCTAGGAGCTGTAATTAAAACAAGATGTGGACCTACACGACTAACAATAACAGCGAAAGCACCTCAGTGGTGTCTTGACCAAGTCTTCAACATGAATGGCAGCTGAACTACCACAGTACCAGACTGCTTCCTGTTTCTCATATTGGAGCAAAGATTTGGCCAACACTCTAAATGAAACCAGGAATCTCACCAAGAGCAACAGGAGCAAAAGTTCAGAGGAGCcatgatatttttcaaaatgcctAGATTCAAAAAATACCAACTACggctaataataatatgctttaGTAGCTTAATGCTCATGGCGTACTGGGAACAGATTGACAATAACATTGTAACCCACGTAATGTCGTTCTCCTACCGCTACCTTCTCAATAACTTCACATTCATTAACGCAAGCTTTAGAGTCAACCCCGAAGATGCTTTCAAGTACAACAATCGCAAATACCTAATAAAAAACGAGGGGAAGTGTGGTGAAAAGGACATTCTGCTCCTGCTCTTTGTGAAAAGCTCCTCAGAGAACTTTGAGAGAAGAAAAGCCATTCGTGCTACTTGGGGAAACGAGGCGTACGTTGAAAGAATGCTGGGTGTTACTGTAAAGGTATTGTTCGCTCTTGGCCTCCATCCTGAACCAGAGCAAAGAAGACTACTTAATATGAAACTGCTGGTTGAGGACCAAAGATATCACGACCTCATCCAGCAGGACTTCATGGACACCTTCCACAATCTTACTCTGAAGCTACTTTTGCAGCTTGGCTGGAAAGAAACCTACTGCCACCGTGCCCAGTTCCTCATGTCTGCAGATGACGACGTCTTCATTCATATTCCCAACTTAATTCACTTCTTGCAAGGGATCGGCCGTAGTAATCTCAAAAACCTTTGGATAGGAAGGGTGCACCGCGGTTCACCTCCCGTTCGAGACAAAGAGAGCAAATACTACGTGTCCCAAGACTTATACCCGTGGTTGTCTTACCCGGATTACACCCCTGGATCTGGGTATGTTCTCTCCAGAGATGCCGCTACCAAAATCTATCAAGCTGCGCTCACCATAAACACTTCCTTTCACATTGATGACGTCTTCCTCGGGATCTGCGCCAAAGTGCTAGATATCGCTCCCAAGGACCATGCGTTCTTTTCAGGAGAGGGAAAAGCTCCTAACCACCCTTGTATTTACAACCAGATGATGACTTCTCATGGACACGTCGGAGACATTCGGGAGATGTGGAAGCGTGTAACAGAAGCCGAAGTTGGTCAGATACCTTCAGGACTGATATGGAGGCTCTACTGCACTGTCACGAAAATTAAGAAGGCAAAGGCACCCAAGAGAGGAAGAATCTGCCTCACCAATGAGAGATGGAGATGGTCAAGTACTGGAAtcttataatacaaaataaaggttgcaGCAAGATG
>XM_043255810.1
AGCGTCTCCTTTAACGTGAATTTAAACAAATACGGGAGTGTCCTTCATTACTCAAATGCCCTCAGACTTCGTGGTTGGGTCACTTTTCAACTTCTACAGGACAGGCTTCGCCACAGAGCAAAGAAATGCTGGTCGCGGATGTCTCGAACCGGTTTCGTGAAGAAAGTTAATGTTTAGACCGCGGGGACCCACTTTATCTAGGAGCTGTAATTAAAACAAGATGTGGACCTACACGACTAACAATAACAGCGAAAGCACCTCAGTGGTGTCTTGACCAAGTCTTCAACATGAATGGCAGCTGAACTACCACAGTACCAGACTGCTTCCTGTTTCTCATATTGGAGCAAAGATTTGGCCAACACTCTAAATGAAACCAGGAATCTCACCAAGAGCAACAGGAGCAAAAGTTCAGAGGAGCcatgatatttttcaaaatgcctAGATTCAAAAAATACCAACTACggctaataataatatgctttaGTAGCTTAATGCTCATGGCGTACTGGGAACAGATTGACAATAACATTGTAACCCACGTAATGTCGTTCTCCTACCGCTACCTTCTCAATAACTTCACATTCATTAACGCAAGCTTTAGAGTCAACCCCGAAGATGCTTTCAAGTACAACAATCGCAAATACCTAATAAAAAACGAGGGGAAGTGTGGTGAAAAGGACATTCTGCTCCTGCTCTTTGTGAAAAGCTCCTCAGAGAACTTTGAGAGAAGAAAAGCCATTCGTGCTACTTGGGGAAACGAGGCGTACGTTGAAAGAATGCTGGGTGTTACTGTAAAGGTATTGTTCGCTCTTGGCCTCCATCCTGAACCAGAGCAAAGAAGACTACTTAATATGAAACTGCTGGTTGAGGACCAAAGATATCACGACCTCATCCAGCAGGACTTCATGGACACCTTCCACAATCTTACTCTGAAGCTACTTTTGCAGCTTGGCTGGAAAGAAACCTACTGCCACCGTGCCCAGTTCCTCATGTCTGCAGATGACGACGTCTTCATTCATATTCCCAACTTAATTCACTTCTTGCAAGGGATCGGCCGTAGTAATCTCAAAAACCTTTGGATAGGAAGGGTGCACCGCGGTTCACCTCCCGTTCGAGACAAAGAGAGCAAATACTACGTGTCCCAAGACTTATACCCGTGGTTGTCTTACCCGGATTACACCCCTGGATCTGGGTATGTTCTCTCCAGAGATGCCGCTACCAAAATCTATCAAGCTGCGCTCACCATAAACACTTCCTTTCACATTGATGACGTCTTCCTCGGGATCTGCGCCAAAGTGCTAGATATCGCTCCCAAGGACCATGCGTTCTTTTCAGGAGAGGGAAAAGCTCCTAACCACCCTTGTATTTACAACCAGATGATGACTTCTCATGGACACGTCGGAGACATTCGGGAGATGTGGAAGCGTGTAACAGAAGCCGAAGTTGGTCAGATACCTTCAGGACTGATATGGAGGCTCTACTGCACTGTCACGAAAGTGAGGCTCCTGTGTGTACCTTTCCTCTCAAACTCTTACCCATGTAAGGCAGCTTTTTTTGAATATGACagttattaaaattgaaaagaaCTCTCGGATTACTAGAGTAACATTTTTCACAAGTAGGTTAGATAAGGGTTCTGTAAGGAATTTAGTGGTGTgttcagagaaataaaaaattaaatgcatccatTTTTCAAACCACTTACTGTGTTTACATTCACGGGGATACCGGAGCCTATCCCAGTGCTTCAGGCGCAGTGCCGCAGTGAAAAGCTCTCGCATAACTGCATGGCCAGTCCAATCCATATCTGATTGGAAATGGAAATTGAGACAAGGATGAGTAATGTAAAACTTTCTTCTATCATACCACGCCTTACACTCTGAAGGTCAACACCAGTCTCTTTTAACAATTTTCTGAATAGCGAAAATTGTTCCTTTTATAGAAGCAGATTAAATAATTTCCTATCTagaataatagttttttttattcatttgactATGCTTAGCCTGTTTTTGACATACGTACACCTTACTGAACTggtataaaattatttctgaatagATTCCTAAACACAATAAGCACAGTTAATGGTAATCAATGTAAACatcaatgtatatatttaagaaaaacaacaaaaaaaacattattaatggaGTTTGATTGCAAACATGATTTGGTGTTTGATTGGAAGGAGGTTTTTGCTCTTCTAGTGGACTAGTTTTGCTTTACTGGACACTTTAAGGCTTAGGATGTGTCCTCTGTAGCCACACACGAAAATGGGaagatttgcatttcaaatgtgCCCAAGAGGAGACGTTTGAAGGTACAAACTTTGCTAAAGGTAAAAAAGGCTTTCTGAAGAAAGGCCAATCTGATTATTGCGCGGTAAATTGTTCACCCACATATACATGACCTGGCCAACAGTACGCAGACACCCTCTTCTAATAAAGTGCTGTGGTGATATTTTTGTAAGTCAAACTGGAGGTTGATCGCCCTGAGGTGCATTTCCAGAACCAACAATGGTTGTAAGATTTACAGTTCAAGGGAACTTGCGACCTTAGCCAAGAGTGCTCTTGTAAAATGTAGCCCTGGGGCCTGTTGCAATAAGGAAGTTCAACCATCTCTGAGTTTAAACTTGATCTCGAGTtgacttaatattaaaaacttttcGGTTTCATAACCGCTGAATTGTGTAGTTCATTCAGCTCAGAGTTTAGCACGTGCACCACGACTATGAAAAGCCATGATCCACGGAGCGCCGGGATTCACCACAGCAACAGCTCAGTCAGTGCGTAACTTTAATTCTTAATAAAGCTTTTCGTTGTTTGAAACGCGTAAGCATTAAAAGTTCATAGGTGTAGGAAAAATTACTTTACAAACGTTTGACATAAAATATCCCTATCTGTTTCAATGCACTGTTGTTTTGTCCCTAGTCTAACGCTTTTttcacataattaaatattctctAATTCAA
>XM_043255813.1
AGCGTCTCCTTTAACGTGAATTTAAACAAATACGGGAGTGTCCTTCATTACTCAAATGCCCTCAGACTTCGTGGTTGGGTCACTTTTCAACTTCTACAGGACAGGCTTCGCCACAGAGCAAAGAAATGCTGGTCGCGGATGTCTCGAACCGGTTTCGTGAAGAAAGTTAATGTTTAGACCGCGGGGACCCACTTTATCTAGGAGCTGTAATTAAAACAAGATGTGGACCTACACGACTAACAATAACAGCGAAAGCACCTCAGTGGTGTCTTGACCAAGTCTTCAACATGAATGGCAGCTGAACTACCACAGTACCAGACTGCTTCCTGTTTCTCATATTGGAGCAAAGATTTGGCCAACACTCTAAATGAAACCAGGAATCTCACCAAGAGCAACAGGAGCAAAAGTTCAGAGGAGCcatgatatttttcaaaatgcctAGATTCAAAAAATACCAACTACggctaataataatatgctttaGTAGCTTAATGCTCATGGCGTACTGGGAACAGATTGACAATAACATTGTAACCCACGTAATGTCGTTCTCCTACCGCTACCTTCTCAATAACTTCACATTCATTAACGCAAGCTTTAGAGTCAACCCCGAAGATGCTTTCAAGTACAACAATCGCAAATACCTAATAAAAAACGAGGGGAAGTGTGGTGAAAAGGACATTCTGCTCCTGCTCTTTGTGAAAAGCTCCTCAGAGAACTTTGAGAGAAGAAAAGCCATTCGTGCTACTTGGGGAAACGAGGCGTACGTTGAAAGAATGCTGGGTGTTACTGTAAAGGTATTGTTCGCTCTTGGCCTCCATCCTGAACCAGAGCAAAGAAGACTACTTAATATGAAACTGCTGGTTGAGGACCAAAGATATCACGACCTCATCCAGCAGGACTTCATGGACACCTTCCACAATCTTACTCTGAAGCTACTTTTGCAGCTTGGCTGGAAAGAAACCTACTGCCACCGTGCCCAGTTCCTCATGTCTGCAGATGACGACGTCTTCATTCATATTCCCAACTTAATTCACTTCTTGCAAGGGATCGGCCGTAGTAATCTCAAAAACCTTTGGATAGGAAGGGTGCACCGCGGTTCACCTCCCGTTCGAGACAAAGAGAGCAAATACTACGTGTCCCAAGACTTATACCCGTGGTTGTCTTACCCGGATTACACCCCTGGATCTGGGTATGTTCTCTCCAGAGATGCCGCTACCAAAATCTATCAAGCTGCGCTCACCATAAACACTTCCTTTCACATTGATGACGTCTTCCTCGGGATCTGCGCCAAAGTGCTAGATATCGCTCCCAAGGACCATGCGTTCTTTTCAGGAGAGGGAAAAGCTCCTAACCACCCTTGTATTTACAACCAGATGATGACTTCTCATGGACACGTCGGAGACATTCGGGAGATGTGGAAGCGTGTAACAGAAGCCGAAGTTGGTCAGATACCTTCAGGACTGATATGGAGGCTCTACTGCACTGTCACGAAAGTGAGGCTCCTGTGTGTACCTTTCCTCTCAAACTCTTACCCATATTAAGAAGGCAAAGGCACCCAAGAGAGGAAGAATCTGCCTCACCAATGAGAGATGGAGATGGTCAAGTACTGGAAtcttataatacaaaataaaggttgcaGCAAGATG

Function

NR:

description
PREDICTED: lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0000139 Golgi membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0047256 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity molecular_function
GO:0008378 galactosyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255802.1 False 1608 mRNA 0.45 3 1375058 1381470
XM_043255810.1 True 2974 mRNA 0.41 2 1375060 1381327
XM_043255813.1 False 1649 mRNA 0.45 3 1375060 1381470

Neighbor

gene id symbol gene type direction distance location
tbl1xr1b tbl1xr1b,LOC107656866,LOC108437519,LOC107568629,LOC103032574,LOC108267995,LOC107722285,LOC106530177,LOC105889501 coding upstream 3142 1356240 ~ 1371916 (+)
kcnmb3 LOC107708981,LOC107599858,LOC107681773 coding upstream 30045 1340743 ~ 1345013 (+)
ephb3a ephb3a,LOC107681809,LOC107599837,LOC107722542,LOC107708817,LOC107656865,LOC108437521,LOC108267069,LOC105889460,LOC102226142 coding upstream 66239 1279837 ~ 1308819 (+)
pls1 pls1,LOC107722705,LOC107656864,LOC107565818,LOC107709028,LOC107681752,LOC108437523 coding upstream 111980 1248218 ~ 1263078 (+)
si:ch211-71m22.1 si:ch211-71m22.1,LOC107722310,LOC107703220,LOC107599861,LOC107558181,LOC107681688 coding upstream 307616 1062189 ~ 1067442 (+)
dcun1d1 dcun1d1,LOC107681826,LOC107568628,LOC107722250,LOC107708830,LOC105889496 coding downstream 9242 1390712 ~ 1396178 (+)
LOC122360630 LOC107681692 coding downstream 59468 1440938 ~ 1447899 (+)
asip2b agrp2,LOC107593895,LOC107715506,LOC107701329,LOC107681750,LOC107722688,LOC107568624 coding downstream 87590 1469060 ~ 1472849 (+)
zgc:153115 zgc:153115,LOC107722210,LOC107701340,LOC107681793,LOC105889440,LOC105030379,LOC106568757 coding downstream 136227 1517697 ~ 1525574 (+)
extl2 extl2,LOC107722455 coding downstream 181535 1563005 ~ 1568542 (+)
G8393 dia1a,LOC107599840,LOC107681802,LOC107722302,LOC107565821,LOC107679841 non-coding upstream 172044 1197427 ~ 1203014 (+)
G8394 NA non-coding upstream 189026 1180130 ~ 1186032 (+)
G8222 dnajb4,LOC107681825,LOC107599850,LOC107708915,LOC107566472,LOC107751861,LOC107690981 non-coding upstream 592313 680687 ~ 782745 (+)
G8173 NA non-coding upstream 703495 668304 ~ 671563 (+)
LOC122328698 NA non-coding upstream 730132 643034 ~ 644926 (+)
G8451 NA non-coding downstream 649 1382119 ~ 1382323 (+)
G8449 NA non-coding downstream 2422 1383892 ~ 1385986 (+)
G8469 LOC107715522,LOC107681815,LOC108437516,LOC108267691 non-coding downstream 26181 1407651 ~ 1425295 (+)
G8508 NA non-coding downstream 217576 1599046 ~ 1673755 (+)
G8519 nos1apb,LOC107715504,LOC107593855,LOC107681742,LOC107560777,LOC107701337 non-coding downstream 250846 1632316 ~ 1636622 (+)
st6galnac5a st6galnac5a,LOC107681827,LOC107708707,LOC107599846,LOC107751866 other upstream 546653 799932 ~ 828405 (+)
LOC122360757 fam73b,miga2,miga1,LOC107599369,LOC107705989,LOC107675762,LOC107737175,LOC107661559,LOC107708777,LOC107681767,LOC107722319,LOC107703235,LOC107558173 other upstream 917313 447162 ~ 457745 (+)
LOC122325097 fuz,LOC107708997,LOC107691039 other upstream 1129694 241451 ~ 245364 (+)
G8167 NA other upstream 1151691 200092 ~ 223367 (+)
ccdc39 ccdc39,LOC107722234,LOC107701322,LOC107708988,LOC107568623 other downstream 16054 1397524 ~ 1408721 (+)
rc3h1b LOC107681708,LOC107560775,LOC107722144 other downstream 163303 1544773 ~ 1559774 (+)
LOC122360854 si:dkey-119f1.1,LOC107593796,LOC107715495,LOC107719281,LOC107701334,LOC107681697,LOC107593797,LOC108443183 other downstream 521597 1903067 ~ 1910679 (+)
arl14 arl14,LOC107722413,LOC107719289 other downstream 552042 1933512 ~ 1936759 (+)
LOC122358138 LOC107593886,LOC107719261,LOC107671769,LOC107559363,LOC107754779,LOC107681703,LOC106568718 other downstream 797296 2178766 ~ 2191448 (+)

Expression


Co-expression Network