kcnmb2 (kcnmb2,LOC107656859,LOC107568625)


Basic Information

Item Value
gene id kcnmb2
gene name kcnmb2,LOC107656859,LOC107568625
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 1345142 ~ 1347767 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255836.1
ATGTTCTTTGTGAAGGGGGTCAAAGCAACACGAGTCACACAACAAAGGGTGATTTATAAGACGTTGTGGGGAAATGAGCTAAAGGacaaaaaaaggacagaaaCGGCGCAGAAGGCCGGGGAGGACAGAGCCATTCTGCTGGGGTTGGGAATGGTGTTCAGCTCGGTCATGATGTACTTTGTGATCTGTATCACCATGGTGCGTGCTTATGCAGACAGTGTATTGACAGATGAAACAACCTGCACTGTGCTAAACTCCACTCTAACAAAGGATATCAATTGTTCATACAACTGTGGCTCAGACTGCTGGCGAGGCTCGAAGTACCCCTGTCTCCAGGTCTTCGTCAGCCTGAACGCCACCGGCCGCATCGGGCTGCTCTCTCACAGTGAGGAGATGCTGGACGTCAGTTCTGAGTGTTTTTATGTGCCAAAATGCCAGAAGGACCACTTCGCCCTGCGCGTTATGATCCAGAATATTTCGGAGCATCTGAAGACGCACCAGCAGATCACATGTTACCACGACTCCAGCGAGCATCGGGGCAGCATCCTCCTGAAGCGTCTGCACGCCGCCGGTGCTGTCTTCCACTCTCTCTTCTGGCCCTCCTGCATGTTCTCCGGAGGAACCCTCATCATACTCATGGTCAAGCTCACTCAGTACCTTTCCATACTGTGTGAACAAATTGGCAAAGCCCCAAAGTGA

Function

symbol description
kcnmb2 Predicted to enable calcium-activated potassium channel activity and potassium channel regulator activity. Predicted to be involved in detection of calcium ion. Predicted to act upstream of or within potassium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of voltage-gated potassium channel complex. Orthologous to human KCNMB2 (potassium calcium-activated channel subfamily M regulatory beta subunit 2).

NR:

description
PREDICTED: calcium-activated potassium channel subunit beta-2-like

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0006813 potassium ion transport biological_process
GO:0016020 membrane cellular_component
GO:0015269 calcium-activated potassium channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255836.1 True 699 mRNA 0.51 4 1345142 1347767

Neighbor

gene id symbol gene type direction distance location
pcolce2a pcolce2a,LOC107681764,LOC107599838,LOC107709043,LOC107565816 coding downstream 71987 1264644 ~ 1273155 (-)
chst2a chst2a,LOC107681814,LOC107599839,LOC107656863,LOC107722292 coding downstream 97880 1245074 ~ 1247262 (-)
fubp1 fubp1,LOC107681766,LOC107703234 coding downstream 329756 1006589 ~ 1015386 (-)
usp33 usp33,LOC107708728,LOC107751869,LOC107681685 coding downstream 349394 974125 ~ 995748 (-)
zzz3 zzz3,LOC107681788,LOC107599843,LOC107703198,LOC107708932,LOC107703238 coding downstream 371799 953716 ~ 973343 (-)
eif4a2 eif4a2,LOC107568626,LOC107593804,LOC108267852,LOC105889495 coding upstream 34810 1382577 ~ 1388864 (-)
LOC122328985 NA coding upstream 35941 1383708 ~ 1383784 (-)
LOC122328960 NA coding upstream 36323 1384090 ~ 1384275 (-)
LOC122328955 NA coding upstream 36930 1384697 ~ 1384875 (-)
LOC122328981 NA coding upstream 37330 1385097 ~ 1385166 (-)
G8443 NA non-coding downstream 12038 1332845 ~ 1333104 (-)
G8439 LOC107722542 non-coding downstream 34851 1309945 ~ 1310291 (-)
G8415 NA non-coding downstream 96552 1248176 ~ 1248590 (-)
G8386 NA non-coding downstream 298235 1046590 ~ 1046907 (-)
G8385 NA non-coding downstream 302192 1042745 ~ 1042950 (-)
G8479 NA non-coding upstream 51641 1399408 ~ 1399728 (-)
G8489 LOC107696015,LOC107710542,LOC107721879 non-coding upstream 114293 1462060 ~ 1462514 (-)
G8599 NA non-coding upstream 492405 1840172 ~ 1876938 (-)
G8623 ppm1la,ppm1l,LOC107681725,LOC107722109,LOC107701333,LOC101065476,LOC106534897 non-coding upstream 575517 1923284 ~ 1929991 (-)
G8622 ppm1l,LOC107560765,LOC107722109,LOC107681725,LOC107701312,LOC107701333 non-coding upstream 582857 1930624 ~ 1932631 (-)
mfsd8l2 si:ch211-38m6.6,LOC107681768,LOC107656858,LOC107565819,LOC107722537,LOC107599859,LOC108437504,LOC105026921 other downstream 7144 1331430 ~ 1337998 (-)
dipk2aa dia1a,LOC107681802,LOC107599840,LOC107722302,LOC107565821,LOC108437525,LOC108268022 other downstream 142155 1179945 ~ 1202987 (-)
LOC122325167 NA other downstream 741198 119350 ~ 603944 (-)
colgalt2a LOC107593860,LOC107681694,LOC107715500 other upstream 177981 1525748 ~ 1532557 (-)
gng5 NA other upstream 574528 1922295 ~ 1940721 (-)
slc1a7a slc1a7a,slc1a7,LOC107722044,LOC107671767,LOC107681716,LOC107593788 other upstream 668641 2016408 ~ 2038705 (-)
tmem125b tmem125b,LOC107719275,LOC107681700,LOC107681734,LOC107719290,LOC107593887 other upstream 702663 2050430 ~ 2055709 (-)
LOC122355284 NA other upstream 727531 2075298 ~ 2128540 (-)

Expression


Co-expression Network