pde4bb (pde4bb,LOC107719260,LOC107681771,LOC107593782,LOC107671696,LOC107559365,LOC108430746)


Basic Information

Item Value
gene id pde4bb
gene name pde4bb,LOC107719260,LOC107681771,LOC107593782,LOC107671696,LOC107559365,LOC108430746
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 2213103 ~ 2265525 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043257912.1
GTCCCATCCGCTGGTGATGGGTGACCACTTCCAATAGGATAGGAGGGGTTTACGGAAAGGTCTGTTTTATTCGCTCTCACGCCGATTTCATTCGTTCATCGATGACTACCGTCTCGAAACGACAGCGCGTGCATAGAAGTTCACAGCTGAAGTTCATTTGTATGCCGGCGGAGAGCCCTGAGAGACAGAAGAACCTTCTGAGCTTGAGCTGTCAGCCGAGATCATGAGGAAGAGCCGGAGCGTCTTGGCAGTGACACCTAGCGATGAAAGCAAGGACCTCTCAGCATGTACGTCTTCTGGAGCCACGTTGGGTGTGGATCTCTGGCGAGGCCCCAGACGCCACTCAGGAACCCTTGTGTTGCCGCCGTTGTCATGGAGACAGGCAGAGAGGGCCCGCAGTCCTCAAGAAGATCATGTTTCCAGACCAACGTCACTGGGCTTCATTACTCCGCCGCGTATAGATATCACACCAGTGCCGCCTGATAGTTTGGAGGTGGAGAATGGCCCCTCCATCGGCTGTAGTCCACTGGACCTGCAGGCCTCACCGGGCTCTGGTTTGGTCCTTCATCCCAACATGGCCAGTCACGGTCAGCGGCGGGAGTCTTTCCTTTACCGCTCGGACAGCGACTACGACCTCTCTCCCAAATCCACCTCTCGCAACTCCTCGCTTGTTGGGGAGCAGCTACACGGTGAAGACCTGATTGTCACTCCTTTTGCTCAGGTGCTTGCAAGTCTTCGTACCGTTAGGAATAATTTCAGCATCCTGACAAATGTCCAGTGTCCCTCCAGCAAAAGATCACCAGTCAGCAGTCAACCGCCGGTGACCAAAGCCAACCTGTCAGATGAATCCTACCAGAAGCTGGCCGTGGAGACCATGGAGGAGCTAGACTGGTGCCTGGACCAGCTGGAGACCATCCAGACGTACCGCTCCGTCAGTGACATGGCCTCTAATAAGTTCAAGAGGATGTTGAATCGGGAGCTGACACATCTGTCTGAGATGAGTCGCTCTGGAAACCAGGTGTCTGAGTTCATCTCCAACACATTCTTAGATAAGCAGAATGAACTGGAGATCCCATCGCCCACTCCTAAATCGCGGGACAGGAAGAGGAGGCAGCAGCAGCTGATGACTCAGATCAGCGGCGTGAGGAAGGTCACGCACGGCCCGGGTCTGTCCGGCAGCTGCGGCACGGCTCGCTTCGGCGTCAAAACTGATTTGGAGGACTTGCTCTCAAAGGACCTGGAAGACATCAACAAATGGGGTCTGAACATCTTTAAAGTTTCAGAGCACTCTCACCATCGGCCGCTGACCTGCATCATGTATGCCATCTTTCAGGAGAGAGATCTAATGAAGACATTTAAGATCCCTGTGGATACCTTCGTGACGTACATGATGACCCTTGAAGATCACTACCACGCAGACGTGGCTTATCACAACAGTCTACACGCGGCCGACGTGGCCCAGTCCACTCACATCCTGCTCTCAACACCCGCACTGGATGCCGTCTTTACAGACCTGGAGATCCTGGCCGCTATCTTTGCAGCAGCCATCCATGATGTGGACCACCCAGGAGTCTCCAACCAGTTCCTAATTAATACCAACTCGGAGCTGGCTCTCATGTACAATGATGAGTCTGTTCTGGAGAACCATCACCTAGCGGTTGGCTTCAAGCTCTTGCAAGGGGAAAACTGTGATATCTTCCAAAACCTCACCAAGAAGCAACGCCAGACTCTCAGGAAGATGGTCATTGATATGGTACTAGCAACGGACATGTCCAAGCACATGAGCTTACTGGCTGACTTGAAGACGATGGTCGAGACTAAGAAAGTGACCAGTTCAGGAGTGCTGCTACTGGACAACTACACGGACCGGATACAGGTCTTACGAAATATGGTCCACTGTGCCGATCTCAGCAATCCCACCAAGCCATTAGACCTGTACCGGCAATGGACGGACCGCATTATGGAGGAGTTCTTCCACCAGGGtgaccgagagagagagcgaggcaTGGAGATCAGCCCGATGTGTGACAAACACACCGCTTCAGTGGAGAAGTCTCAGgttGGTTTCATTGATTACATCGTGCATCCACTATGGGAGACCTGGGCGGACCTGGTGCATCCGGATGCGCAGGATATCTTGGACACTTTAGAGGAGAACAGGAACTGGTACCACAGCATGATACCGCAGAGTCCCTCCCCTCCCTTCTTCGAAACGGGAACCGATGGCGGAGACAAGTTTCAGTTCGAGTTGGAGGTTGAGGAAGGAGCGAAGCTGGACTCAGAGAACCTCTTAGAGTCAGGCTGTGTGGAGATAGTGACGCATTCGCCTCCGTCCTCCGAGACGTAGCACCTCACTACAATGGCCGTCGTGTTGGCCATATTTGATGAGAGAGTAAAGCGGAGGAACGTTATTCTCCCGCTTCCTGAGAATCTCCCGCCGCGTCTCAGGACTCTGCTCTTGTTTCAGAGCCCGAATCTGGATCGAGCGAACATCCCACACAATCTAGCTGGAATTTGCAGGAATCCATTCATTGCCAGATGCGGAGGGACGGACTGCTGTACCGAAAGTGCCATAAGctggattttttaaaatcagacgTTACAGTTTGATGCGAATGTTAGGGTGGGTTTCTGTGAAGGCGAAAGGCTGACCCTCTGTTAAGAGGGCTTTGTACTAAAAAGCGacttttttgtaaagaaaagtgACTACTTTTTTGTACCTGTGTGTTCTTGTGTGACTTTTTTTGGTGTCACATCCAACTACTCCTTTGGAAACGTGAAAGATGCTGTCACGCCGAGAGCAAAAGCATGTAATTCCCATGCAGTCTTCCTAAATTTTGGACTTCAGAATAATCTAGTGCCAGCATACTTTATTCAAGTAATACAAAACCTTTGTATTTTGTAACGAACTGTTTCTCTTTTAAAAAGGCGTTCTTATTAAGCGATACGATTAATGTGACGTTTTATGtcgtattaaataaaaacaggatCCAAAGACTCCA
>XM_043257920.1
ACCTCAACAAACACACTCCTACAGCCATACCGCGGGATTCAAGGCTTTAACACACCACTGCGCATGACACTTCCTCATGGATTTAAAGCAAGATGCTGACATCTGTCCTGTCAGTCAGAGGATGGAGATGGGTTTGGACACGGACTGTCAGTCTGATGTGAAAGAGCTCGCAGCTGGTGCAAGAAACGCGCCTCAGAACTGCCCGGGCATGTTCAGAAAGCTGGTGGTGAATAAAACAGTCCGCCAACGCAGACGCTTCACAGTGGCCGTGTCTCATACCTGTTTGGAGGTGGAGAATGGCCCCTCCATCGGCTGTAGTCCACTGGACCTGCAGGCCTCACCGGGCTCTGGTTTGGTCCTTCATCCCAACATGGCCAGTCACGGTCAGCGGCGGGAGTCTTTCCTTTACCGCTCGGACAGCGACTACGACCTCTCTCCCAAATCCACCTCTCGCAACTCCTCGCTTGTTGGGGAGCAGCTACACGGTGAAGACCTGATTGTCACTCCTTTTGCTCAGGTGCTTGCAAGTCTTCGTACCGTTAGGAATAATTTCAGCATCCTGACAAATGTCCAGTGTCCCTCCAGCAAAAGATCACCAGTCAGCAGTCAACCGCCGGTGACCAAAGCCAACCTGTCAGATGAATCCTACCAGAAGCTGGCCGTGGAGACCATGGAGGAGCTAGACTGGTGCCTGGACCAGCTGGAGACCATCCAGACGTACCGCTCCGTCAGTGACATGGCCTCTAATAAGTTCAAGAGGATGTTGAATCGGGAGCTGACACATCTGTCTGAGATGAGTCGCTCTGGAAACCAGGTGTCTGAGTTCATCTCCAACACATTCTTAGATAAGCAGAATGAACTGGAGATCCCATCGCCCACTCCTAAATCGCGGGACAGGAAGAGGAGGCAGCAGCAGCTGATGACTCAGATCAGCGGCGTGAGGAAGGTCACGCACGGCCCGGGTCTGTCCGGCAGCTGCGGCACGGCTCGCTTCGGCGTCAAAACTGATTTGGAGGACTTGCTCTCAAAGGACCTGGAAGACATCAACAAATGGGGTCTGAACATCTTTAAAGTTTCAGAGCACTCTCACCATCGGCCGCTGACCTGCATCATGTATGCCATCTTTCAGGAGAGAGATCTAATGAAGACATTTAAGATCCCTGTGGATACCTTCGTGACGTACATGATGACCCTTGAAGATCACTACCACGCAGACGTGGCTTATCACAACAGTCTACACGCGGCCGACGTGGCCCAGTCCACTCACATCCTGCTCTCAACACCCGCACTGGATGCCGTCTTTACAGACCTGGAGATCCTGGCCGCTATCTTTGCAGCAGCCATCCATGATGTGGACCACCCAGGAGTCTCCAACCAGTTCCTAATTAATACCAACTCGGAGCTGGCTCTCATGTACAATGATGAGTCTGTTCTGGAGAACCATCACCTAGCGGTTGGCTTCAAGCTCTTGCAAGGGGAAAACTGTGATATCTTCCAAAACCTCACCAAGAAGCAACGCCAGACTCTCAGGAAGATGGTCATTGATATGGTACTAGCAACGGACATGTCCAAGCACATGAGCTTACTGGCTGACTTGAAGACGATGGTCGAGACTAAGAAAGTGACCAGTTCAGGAGTGCTGCTACTGGACAACTACACGGACCGGATACAGGTCTTACGAAATATGGTCCACTGTGCCGATCTCAGCAATCCCACCAAGCCATTAGACCTGTACCGGCAATGGACGGACCGCATTATGGAGGAGTTCTTCCACCAGGGtgaccgagagagagagcgaggcaTGGAGATCAGCCCGATGTGTGACAAACACACCGCTTCAGTGGAGAAGTCTCAGgttGGTTTCATTGATTACATCGTGCATCCACTATGGGAGACCTGGGCGGACCTGGTGCATCCGGATGCGCAGGATATCTTGGACACTTTAGAGGAGAACAGGAACTGGTACCACAGCATGATACCGCAGAGTCCCTCCCCTCCCTTCTTCGAAACGGGAACCGATGGCGGAGACAAGTTTCAGTTCGAGTTGGAGGTTGAGGAAGGAGCGAAGCTGGACTCAGAGAACCTCTTAGAGTCAGGCTGTGTGGAGATAGTGACGCATTCGCCTCCGTCCTCCGAGACGTAGCACCTCACTACAATGGCCGTCGTGTTGGCCATATTTGATGAGAGAGTAAAGCGGAGGAACGTTATTCTCCCGCTTCCTGAGAATCTCCCGCCGCGTCTCAGGACTCTGCTCTTGTTTCAGAGCCCGAATCTGGATCGAGCGAACATCCCACACAATCTAGCTGGAATTTGCAGGAATCCATTCATTGCCAGATGCGGAGGGACGGACTGCTGTACCGAAAGTGCCATAAGctggattttttaaaatcagacgTTACAGTTTGATGCGAATGTTAGGGTGGGTTTCTGTGAAGGCGAAAGGCTGACCCTCTGTTAAGAGGGCTTTGTACTAAAAAGCGacttttttgtaaagaaaagtgACTACTTTTTTGTACCTGTGTGTTCTTGTGTGACTTTTTTTGGTGTCACATCCAACTACTCCTTTGGAAACGTGAAAGATGCTGTCACGCCGAGAGCAAAAGCATGTAATTCCCATGCAGTCTTCCTAAATTTTGGACTTCAGAATAATCTAGTGCCAGCATACTTTATTCAAGTAATACAAAACCTTTGTATTTTGTAACGAACTGTTTCTCTTTTAAAAAGGCGTTCTTATTAAGCGATACGATTAATGTGACGTTTTATGtcgtattaaataaaaacaggatCCAAAGACTCCA

Function

symbol description
pde4bb Predicted to enable 3',5'-cyclic-AMP phosphodiesterase activity and transmembrane transporter binding activity. Predicted to be involved in signal transduction. Predicted to act upstream of or within cAMP catabolic process. Predicted to be active in cytosol; nucleus; and perinuclear region of cytoplasm. Orthologous to human PDE4B (phosphodiesterase 4B).

NR:

description
PREDICTED: cAMP-specific 3',5'-cyclic phosphodiesterase 4B-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043257912.1 True 3002 mRNA 0.51 17 2213103 2265525
XM_043257920.1 False 2798 mRNA 0.51 15 2231999 2265525

Neighbor

gene id symbol gene type direction distance location
LOC122358163 leprot,LOC107754776,LOC107719262,LOC107681772,LOC107671671 coding upstream 3880 2205194 ~ 2209223 (+)
LOC122358154 LOC107681836,LOC107719284 coding upstream 34938 2173372 ~ 2178165 (+)
LOC122326519 lrp8,LOC107681710,LOC107671705,LOC107719273,LOC107559340 coding upstream 56864 2083675 ~ 2156239 (+)
ebna1bp2 ebna1bp2,LOC107722608,LOC107580944 coding upstream 137066 2072770 ~ 2076037 (+)
LOC122357653 LOC107719275 coding upstream 160977 2038907 ~ 2052126 (+)
LOC122326129 tctex1d1,LOC107709344,LOC107719283 coding downstream 25938 2291463 ~ 2293495 (+)
bcl6ab LOC107593779,LOC107681786,LOC107559367,LOC107709352,LOC107671762,LOC107719257 coding downstream 44012 2309537 ~ 2316103 (+)
LOC122358683 fam78ba,LOC107593884,LOC107681754,LOC107709346,LOC107671676,LOC105891364,LOC107102035,LOC101481240 coding downstream 57186 2322711 ~ 2327443 (+)
LOC122358767 tsen15,LOC107735630,LOC107681748 coding downstream 125353 2390878 ~ 2391452 (+)
LOC122358704 cmpk,cmpk1,LOC107719256,LOC107681787,LOC107671754,LOC107559368,LOC107709354 coding downstream 162032 2427557 ~ 2431457 (+)
G8701 NA non-coding upstream 494 2212258 ~ 2212609 (+)
G8700 NA non-coding upstream 1030 2211753 ~ 2212073 (+)
G8691 NA non-coding upstream 42283 2170596 ~ 2170820 (+)
G8670 tmem125b,LOC107681734,LOC107719290,LOC107593887 non-coding upstream 157373 2053311 ~ 2055730 (+)
LOC122355709 LOC107593853,LOC107719278,LOC107681699 non-coding upstream 264741 1947128 ~ 1948362 (+)
G8716 NA non-coding downstream 22761 2288286 ~ 2321187 (+)
G8717 NA non-coding downstream 23300 2288825 ~ 2290040 (+)
G8737 NA non-coding downstream 178063 2443588 ~ 2445200 (+)
G8724 NA non-coding downstream 246097 2511622 ~ 2609519 (+)
G8764 NA non-coding downstream 346997 2612522 ~ 2613104 (+)
LOC122358138 LOC107593886,LOC107719261,LOC107671769,LOC107559363,LOC107754779,LOC107681703,LOC106568718 other upstream 21655 2178766 ~ 2191448 (+)
arl14 arl14,LOC107722413,LOC107719289 other upstream 276344 1933512 ~ 1936759 (+)
LOC122360854 si:dkey-119f1.1,LOC107593796,LOC107715495,LOC107719281,LOC107701334,LOC107681697,LOC107593797,LOC108443183 other upstream 302424 1903067 ~ 1910679 (+)
rc3h1b LOC107681708,LOC107560775,LOC107722144 other upstream 653329 1544773 ~ 1559774 (+)
ccdc39 ccdc39,LOC107722234,LOC107701322,LOC107708988,LOC107568623 other upstream 804382 1397524 ~ 1408721 (+)
sgip1b sgip1b,LOC107719259,LOC107593781,LOC107709351,LOC107671695,LOC107559342,LOC107681818,LOC108430747 other downstream 5154 2270679 ~ 2288216 (+)
G8725 sec22ba,LOC107681807,LOC107727533,LOC107709355,LOC107671713,LOC107559355,LOC105891393 other downstream 133429 2398954 ~ 2401745 (+)
LOC122358652 slc35a3b,LOC107559354,LOC107593843,LOC107671667,LOC107709347 other downstream 141217 2406742 ~ 2419955 (+)
zgc:55943 zgc:55943,LOC107727521,LOC107671715,LOC107709356,LOC107559369,LOC107593773,LOC108430752 other downstream 282541 2548066 ~ 2555321 (+)
G8760 NA other downstream 326109 2591634 ~ 2592758 (+)

Expression


Co-expression Network