LOC122358652 (slc35a3b,LOC107559354,LOC107593843,LOC107671667,LOC107709347)


Basic Information

Item Value
gene id LOC122358652
gene name slc35a3b,LOC107559354,LOC107593843,LOC107671667,LOC107709347
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 2406742 ~ 2419955 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258523.1
ACTTCTGAATGGTTTGAGGCTGGGAtttagtgcatttaaatgtactcGATGAACACATTCATTGCACGGAGAGCATTCACTCAGTATCGTTATCTAATCTCATTCTTGACCAAGATGGCTTTTAGAGGCTTTCGCATTTGAACTCTTCATATGTATTCCCATTGCATTTTGAGTTGAACTTCGATTTATAAAGTGGGAtgttttataattcattatagTCAAAACCGTTACACGCACGTCTTTATAAGCGAGGCTGTGGAGGTGGCAGGGGGCATCTCAATGGACAGGATGTGTTGAGTAGTGCTCCAGCACACACAGAGCAGGACTGTGTGCTTCTCCCCCCTCACCAGAGCCTCAGGGCTGCATAAGGCCGTCTGTGTGCGCTGTACAAGCCACCTCCGGCCAGCCTTCTCAATCACACCCAAACCTTCTGTTTGCCAACTCATGTTTGCATTGATGTAAATCTATTAAATTTAAACTCCCGGCTCCCTTTTTAATGACCTTGAGGCATTTTTCCCTAATCACTGTGTTTTTACCAGCTGTCGGTGTGCAAATAGTTATTTTCCTTTGTGAAAgcaaaactgcaaaatataGGATTACAACACCATATCACATCCTCCTTCTATCCGGCTGTGTGTCGGTGGGAGTGGCTCTTGTGGGCCTCTTCGCTCTATATTCAAGTCTGAGGCATGCTTTCTCAGTACCTGCACTGAAAGGATACTGtatctgctgaaaaaaaagactgtaatCTCTGCGATGACACCGCTGTGATGGTTTTAACTGGGaCTAAACAGGGAATCTCGTCCCTGTCCCCCGTCTCTGTATCAGCGGAGGTTTCCGGTATTTCCATGTCGTCCACCTCCTCACGACTGAAGTATGTTTCTCTGGGGGTGCTGGTGCTGCAGACCACCTCTCTGGTGCTGACGATGCGTTACTCTCGAACGCTGCAGTCTGACGGGCCGCGCTACCTGGCGTCGTCTGCCGTGGTGTGCGCCGAAGTCCTGAAGATCGCTGTATGCATGCTGCTGGTCTTCAGAGAACACAGTTTCAGTGTCCGTGCACTGAATCGGGTGTTGAAGGAGGAAGTGATCAACAAGCCTCTCCTAACGCTGAAGTTGGCCATTCCTTCAGGTATCTACACCCTGCAGAACAACCTGCTTTATGTGGCTCTGTCAAATCTAGATGCAGCTACGTACCAGGTTACATATCAGCTGAAAATTCTCACTACAGCCCTGTTCTCTGTGTCCATGCTGGGCAAAAGGCTTGGTATTTACCAGTGGCTCTCGCTGGTCATTCTGATGACTGGAATTGCACTTGTCCAGTGGCCAACTGAAGTTACCCCGAGCACCAAGCAGGAGGATCTGACGGCCGGCTCTCAGTTGATGGGTCTTCTCGCTGTGCTTGTGGCCTGCTTCTCCAGCGGATTTGCTGGCGTGTATTTCGAAAAGATCCTCAAAGAAAGCAAGCAGAGCGTCTGGATCCGTAACATCCAGCTAGGTTTATTTGGGCTGGTTTTTGGGCTCGGGGGAGTGTTTGCGTACGACGGAGAGCGAGTGCAGGAGAATGGACTCTTTCAAGGGTACAATGGTTTGACGTGGACTGTGGTGGCTCTCCAGGCTTTGGGTGGGTTAGTCATTGCAGCTGTCATCAAATATGCAGATAACATCCTGAAAGGCTTTGCCACGTCCATCTCAATCATTCTCTCCACCCTCATCTCTTATTTCTTGTTGGAAGATTTTGACCCCACAAGcGTGTTTTTCCTGGGTGCGATGCTGGTTATCGCTGCTACATTTCTCTACGGGTATGAGAGCACACCTGCCGTCAGCTCTAGTAAAGTCTAGAAGACCGGACTCAAGATGATAAACAGTCATCAGGAGATGCTCTACTTCAGCTGAAGTTCAAGGCTAGAGAACCGGTGATGCTGTAAGGATGCTATTAGAAGGTAGcgcaaaaaaaccccccaaacaTTCAACCGTCCTAAACCTGAGTTATATCATTTCATGAAATCAACAAGCTAACAGTAGTAATGAAACTCAAAAACGTCTTCTGATGCGTTCTGTGGCAGGACTGTTTGTCACACTCACCTGAAGACTTTAAGGACttcatttgaaatgtgtttacatataataaGAAACTCTGAAACAGAGCCTCACAGATTCAACATTTtagacttttatatttattttctgtgccATACGGGGGCATATCGAGAAGGAGATTGTTTTACTTGAATGTATCCTTCGAGAAACGCAATTTTTCTCGAGGCCAATAAAAAGTGTTTCTCAAATGTCTTCCTGTCAAATtctgataataaaaacaagttgAATCTGAAACTGAA
>XM_043258526.1
ATTTGAAAAGTTGAGGTGAAACTGACACGACAAAAACATGAGCGTCAATCGTAGCTCCTCTCAGGCCGGCAGCGCGCTTGAGGAAGTGGTCGTTTTCTATCAACTGATCGATATGCTCGAGACGTCGGCCTCGTCTCTAATGGACTCGACGCTCACTAAGCGCTACGCGTCTGAGCTGCTCCACTGACGCCAGaCTAAACAGGGAATCTCGTCCCTGTCCCCCGTCTCTGTATCAGCGGAGGTTTCCGGTATTTCCATGTCGTCCACCTCCTCACGACTGAAGTATGTTTCTCTGGGGGTGCTGGTGCTGCAGACCACCTCTCTGGTGCTGACGATGCGTTACTCTCGAACGCTGCAGTCTGACGGGCCGCGCTACCTGGCGTCGTCTGCCGTGGTGTGCGCCGAAGTCCTGAAGATCGCTGTATGCATGCTGCTGGTCTTCAGAGAACACAGTTTCAGTGTCCGTGCACTGAATCGGGTGTTGAAGGAGGAAGTGATCAACAAGCCTCTCCTAACGCTGAAGTTGGCCATTCCTTCAGGTATCTACACCCTGCAGAACAACCTGCTTTATGTGGCTCTGTCAAATCTAGATGCAGCTACGTACCAGGTTACATATCAGCTGAAAATTCTCACTACAGCCCTGTTCTCTGTGTCCATGCTGGGCAAAAGGCTTGGTATTTACCAGTGGCTCTCGCTGGTCATTCTGATGACTGGAATTGCACTTGTCCAGTGGCCAACTGAAGTTACCCCGAGCACCAAGCAGGAGGATCTGACGGCCGGCTCTCAGTTGATGGGTCTTCTCGCTGTGCTTGTGGCCTGCTTCTCCAGCGGATTTGCTGGCGTGTATTTCGAAAAGATCCTCAAAGAAAGCAAGCAGAGCGTCTGGATCCGTAACATCCAGCTAGGTTTATTTGGGCTGGTTTTTGGGCTCGGGGGAGTGTTTGCGTACGACGGAGAGCGAGTGCAGGAGAATGGACTCTTTCAAGGGTACAATGGTTTGACGTGGACTGTGGTGGCTCTCCAGGCTTTGGGTGGGTTAGTCATTGCAGCTGTCATCAAATATGCAGATAACATCCTGAAAGGCTTTGCCACGTCCATCTCAATCATTCTCTCCACCCTCATCTCTTATTTCTTGTTGGAAGATTTTGACCCCACAAGcGTGTTTTTCCTGGGTGCGATGCTGGTTATCGCTGCTACATTTCTCTACGGGTATGAGAGCACACCTGCCGTCAGCTCTAGTAAAGTCTAGAAGACCGGACTCAAGATGATAAACAGTCATCAGGAGATGCTCTACTTCAGCTGAAGTTCAAGGCTAGAGAACCGGTGATGCTGTAAGGATGCTATTAGAAGGTAGcgcaaaaaaaccccccaaacaTTCAACCGTCCTAAACCTGAGTTATATCATTTCATGAAATCAACAAGCTAACAGTAGTAATGAAACTCAAAAACGTCTTCTGATGCGTTCTGTGGCAGGACTGTTTGTCACACTCACCTGAAGACTTTAAGGACttcatttgaaatgtgtttacatataataaGAAACTCTGAAACAGAGCCTCACAGATTCAACATTTtagacttttatatttattttctgtgccATACGGGGGCATATCGAGAAGGAGATTGTTTTACTTGAATGTATCCTTCGAGAAACGCAATTTTTCTCGAGGCCAATAAAAAGTGTTTCTCAAATGTCTTCCTGTCAAATtctgataataaaaacaagttgAATCTGAAACTGAA
>XR_006252635.1
TGATACTTCTGAATGGTTTGAGGCTGGGAtttagtgcatttaaatgtactcGATGAACACATTCATTGCACGGAGAGCATTCACTCAGTATCGTTATCTAATCTCATTCTTGACCAAGATGGCTTTTAGAGGCTTTCGCATTTGAACTCTTCATATGTATTCCCATTGCATTTTGAGTTGAACTTCGATTTATAAAGTGGGAtgttttataattcattatagTCAAAACCGTTACACGCACGTCTTTATAAGCGAGGCTGTGGAGGTGGCAGGGGGCATCTCAATGGACAGGATGTGTTGAGTAGTGCTCCAGCACACACAGAGCAGGACTGTGTGCTTCTCCCCCCTCACCAGAGCCTCAGGGCTGCATAAGGCCGTCTGTGTGCGCTGTACAAGCCACCTCCGGCCAGCCTTCTCAATCACACCCAAACCTTCTGTTTGCCAACTCATGTTTGCATTGATGTAAATCTATTAAATTTAAACTCCCGGCTCCCTTTTTAATGACCTTGAGGCATTTTTCCCTAATCACTGTGTTTTTACCAGCTGTCGGTGTGCAAATAGTTATTTTCCTTTGTGAAAgcaaaactgcaaaatataGGATTACAACACCATATCACATCCTCCTTCTATCCGGCTGTGTGTCGGTGGGAGTGGCTCTTGTGGGCCTCTTCGCTCTATATTCAAGTCTGAGGCATGCTTTCTCAGTACCTGCACTGAAAGGATACTGtatctgctgaaaaaaaagactgtaatCTCTGCGATGACACCGCTGTGATGGTTTTAACTGGGaCTAAACAGGGAATCTCGTCCCTGTCCCCCGTCTCTGTATCAGCGGAGGTTTCCGGTATTTCCATGTCGTCCACCTCCTCACGACTGAAGTATGTTTCTCTGGGGGTGCTGGTGCTGCAGACCACCTCTCTGGTGCTGACGATGCGTTACTCTCGAACGCTGCAGTCTGACGGGCCGCGCTACCTGGCGTCGTCTGCCGTGGTGTGCGCCGAAGTCCTGAAGATCGCTGTATGCATGCTGCTGGTCTTCAGAGAACACAGTTTCAGTGTCCGTGCACTGAATCGGGTGTTGAAGGAGGAAGTGATCAACAAGCCTCTCCTAACGCTGAAGTTGGCCATTCCTTCAGGTATCTACACCCTGCAGAACAACCTGCTTTATGTGGCTCTGTCAAATCTAGATGCAGCTACGTACCAGGTTACATATCAGCTGAAAATTCTCACTACAGCCCTGTTCTCTGTGTCCATGCTGGGCAAAAGGCTTGGTATTTACCAGTGGCTCTCGCTGGTCATTCTGATGACTGGAATTGCACTTGTCCAGTGGCCAACTGAAGTTACCCCGAGCACCAAGCAGGAGGATCTGACGGCCGGCTCTCAGTTGATGGGTCTTCTCGCTGTGCTTGTGGCCTGCTTCTCCAGCGGATTTGCTGGCGTGTATTTCGAAAAGATCCTCAAAGAAAGCAAGCAGAGCGTCTGGATCCGTAACATCCAGCTAGGTTTATTTGGGCTGGTTTTTGGGCTCGGGGGAGTGTTTGCGTACGACGGAGAGCGAGTGCAGGAGAATGGACTCTTTCAAGGGTACAATGGTTTGACGTGGACTGTGGTGGCTCTCCAGATAACATCCTGAAAGGCTTTGCCACGTCCATCTCAATCATTCTCTCCACCCTCATCTCTTATTTCTTGTTGGAAGATTTTGACCCCACAAGcGTGTTTTTCCTGGGTGCGATGCTGGTTATCGCTGCTACATTTCTCTACGGGTATGAGAGCACACCTGCCGTCAGCTCTAGTAAAGTCTAGAAGACCGGACTCAAGATGATAAACAGTCATCAGGAGATGCTCTACTTCAGCTGAAGTTCAAGGCTAGAGAACCGGTGATGCTGTAAGGATGCTATTAGAAGGTAGcgcaaaaaaaccccccaaacaTTCAACCGTCCTAAACCTGAGTTATATCATTTCATGAAATCAACAAGCTAACAGTAGTAATGAAACTCAAAAACGTCTTCTGATGCGTTCTGTGGCAGGACTGTTTGTCACACTCACCTGAAGACTTTAAGGACttcatttgaaatgtgtttacatataataaGAAACTCTGAAACAGAGCCTCACAGATTCAACATTTtagacttttatatttattttctgtgccATACGGGGGCATATCGAGAAGGAGATTGTTTTACTTGAATGTATCCTTCGAGAAACGCAATTTTTCTCGAGGCCAATAAAAAGTGTTTCTCAAATGTCTTCCTGTCAAATtctgataataaaaacaagttgAATCTGAAACTGAA

Function

symbol description
slc35a3b Predicted to enable UDP-galactose transmembrane transporter activity. Predicted to act upstream of or within carbohydrate transport and pyrimidine nucleotide-sugar transmembrane transport. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Predicted to be integral component of Golgi membrane. Is expressed in axis. Orthologous to human SLC35A3 (solute carrier family 35 member A3).

NR:

description
PREDICTED: UDP-N-acetylglucosamine transporter-like isoform X1

GO:

id name namespace
GO:0015780 nucleotide-sugar transmembrane transport biological_process
GO:0008643 carbohydrate transport biological_process
GO:0000139 Golgi membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005338 nucleotide-sugar transmembrane transporter activity molecular_function
GO:0005351 carbohydrate molecular_function

KEGG:

id description
K15272 SLC35A1_2_3; solute carrier family 35 (UDP-sugar transporter), member A1/2/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258523.1 True 2338 mRNA 0.46 8 2411169 2419955
XM_043258526.1 False 1746 mRNA 0.48 8 2406742 2419955
XR_006252635.1 False 2299 transcript 0.46 8 2411165 2419955

Neighbor

gene id symbol gene type direction distance location
LOC122358767 tsen15,LOC107735630,LOC107681748 coding upstream 15290 2390878 ~ 2391452 (+)
LOC122358683 fam78ba,LOC107593884,LOC107681754,LOC107709346,LOC107671676,LOC105891364,LOC107102035,LOC101481240 coding upstream 79299 2322711 ~ 2327443 (+)
bcl6ab LOC107593779,LOC107681786,LOC107559367,LOC107709352,LOC107671762,LOC107719257 coding upstream 90639 2309537 ~ 2316103 (+)
LOC122326129 tctex1d1,LOC107709344,LOC107719283 coding upstream 113247 2291463 ~ 2293495 (+)
pde4bb pde4bb,LOC107719260,LOC107681771,LOC107593782,LOC107671696,LOC107559365,LOC108430746 coding upstream 141217 2213103 ~ 2265525 (+)
LOC122358704 cmpk,cmpk1,LOC107719256,LOC107681787,LOC107671754,LOC107559368,LOC107709354 coding downstream 7602 2427557 ~ 2431457 (+)
LOC122360901 NA coding downstream 33895 2453850 ~ 2461222 (+)
LOC122360938 LOC107593781,LOC107719259,LOC107709351,LOC107671695,LOC107559342 coding downstream 75988 2495943 ~ 2510010 (+)
imp3 imp3,LOC107671714,LOC107681808 coding downstream 121960 2541915 ~ 2544563 (+)
abi1b abi1b,LOC107671751,LOC107559371,LOC107681778 coding downstream 143222 2563177 ~ 2581265 (+)
G8716 NA non-coding upstream 85555 2288286 ~ 2321187 (+)
G8717 NA non-coding upstream 116702 2288825 ~ 2290040 (+)
G8703 NA non-coding upstream 153151 2249222 ~ 2253591 (+)
G8707 NA non-coding upstream 179491 2226905 ~ 2227251 (+)
G8706 NA non-coding upstream 184668 2221708 ~ 2222074 (+)
G8737 NA non-coding downstream 23633 2443588 ~ 2445200 (+)
G8724 NA non-coding downstream 91667 2511622 ~ 2609519 (+)
G8764 NA non-coding downstream 192567 2612522 ~ 2613104 (+)
G8794 NA non-coding downstream 399117 2819072 ~ 2872749 (+)
G8816 NA non-coding downstream 492336 2912291 ~ 2912787 (+)
G8725 sec22ba,LOC107681807,LOC107727533,LOC107709355,LOC107671713,LOC107559355,LOC105891393 other upstream 4997 2398954 ~ 2401745 (+)
sgip1b sgip1b,LOC107719259,LOC107593781,LOC107709351,LOC107671695,LOC107559342,LOC107681818,LOC108430747 other upstream 118526 2270679 ~ 2288216 (+)
LOC122358138 LOC107593886,LOC107719261,LOC107671769,LOC107559363,LOC107754779,LOC107681703,LOC106568718 other upstream 215294 2178766 ~ 2191448 (+)
arl14 arl14,LOC107722413,LOC107719289 other upstream 469983 1933512 ~ 1936759 (+)
LOC122360854 si:dkey-119f1.1,LOC107593796,LOC107715495,LOC107719281,LOC107701334,LOC107681697,LOC107593797,LOC108443183 other upstream 496063 1903067 ~ 1910679 (+)
zgc:55943 zgc:55943,LOC107727521,LOC107671715,LOC107709356,LOC107559369,LOC107593773,LOC108430752 other downstream 128111 2548066 ~ 2555321 (+)
G8760 NA other downstream 171679 2591634 ~ 2592758 (+)
LOC122355548 NA other downstream 197252 2617207 ~ 2669943 (+)
LOC122328998 NA other downstream 198047 2618002 ~ 2618134 (+)
LOC122329004 NA other downstream 198361 2618316 ~ 2618449 (+)

Expression


Co-expression Network